RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 CRPP02741 224 aa13.26□□□□□ -0.29
LPCAT3-201ENST00000261407 LINC00269Q8N2A0 174 aa13.26□□□□□ -0.29
LPCAT3-201ENST00000261407 Q9HAA7 133 aa13.26□□□□□ -0.29
LPCAT3-201ENST00000261407 IGLV10-54A0A075B6I4 117 aa13.25□□□□□ -0.29
LPCAT3-201ENST00000261407 CITED1Q99966 193 aa13.25□□□□□ -0.29
LPCAT3-201ENST00000261407 TRAV13-2A0A0B4J235 113 aa13.24□□□□□ -0.29
LPCAT3-201ENST00000261407 IBA57-AS1B1ANH7 110 aa13.24□□□□□ -0.29
LPCAT3-201ENST00000261407 SS18Q15532 418 aa13.24□□□□□ -0.29
LPCAT3-201ENST00000261407 LYRM9A8MSI8 78 aa13.24□□□□□ -0.29
LPCAT3-201ENST00000261407 SMIM11BQ8TCY0 68 aa13.24□□□□□ -0.29
LPCAT3-201ENST00000261407 C22orf24Q9Y442 160 aa13.24□□□□□ -0.29
LPCAT3-201ENST00000261407 TRAV26-1A0A087WT03 109 aa13.23□□□□□ -0.29
LPCAT3-201ENST00000261407 RPL28P46779 137 aaKnown RBP13.23□□□□□ -0.29
LPCAT3-201ENST00000261407 PPDPFQ9H3Y8 114 aa13.22□□□□□ -0.29
LPCAT3-201ENST00000261407 A0A1B0GV72 72 aa13.22□□□□□ -0.29
LPCAT3-201ENST00000261407 BAALC-AS2P0C853 105 aa13.22□□□□□ -0.29
LPCAT3-201ENST00000261407 DAD1P61803 113 aa13.22□□□□□ -0.29
LPCAT3-201ENST00000261407 TTC32Q5I0X7 151 aa13.22□□□□□ -0.29
LPCAT3-201ENST00000261407 DEFB121Q5J5C9 76 aa13.22□□□□□ -0.29
LPCAT3-201ENST00000261407 C15orf53Q8NAA6 179 aa13.22□□□□□ -0.29
LPCAT3-201ENST00000261407 A0A087WYN8 130 aa13.2□□□□□ -0.3
LPCAT3-201ENST00000261407 SNCGO76070 127 aa13.2□□□□□ -0.3
LPCAT3-201ENST00000261407 HTN3P15516 51 aa13.2□□□□□ -0.3
LPCAT3-201ENST00000261407 ANK2Q01484 3957 aa13.2□□□□□ -0.3
LPCAT3-201ENST00000261407 TRACP01848 142 aa13.2□□□□□ -0.3
LPCAT3-201ENST00000261407 ANGP03950 147 aaKnown RBP13.2□□□□□ -0.3
LPCAT3-201ENST00000261407 Q8NAQ8 132 aa13.2□□□□□ -0.3
LPCAT3-201ENST00000261407 APOC4P55056 127 aa13.19□□□□□ -0.3
LPCAT3-201ENST00000261407 PRR3P79522 188 aaKnown RBP13.19□□□□□ -0.3
LPCAT3-201ENST00000261407 ATP5G1P05496 136 aa13.18□□□□□ -0.3
LPCAT3-201ENST00000261407 Q8IZM0 81 aa13.18□□□□□ -0.3
LPCAT3-201ENST00000261407 OR13C6PQ8NH95 151 aa13.18□□□□□ -0.3
LPCAT3-201ENST00000261407 CHCHD10Q8WYQ3 142 aaPredicted RBP13.18□□□□□ -0.3
LPCAT3-201ENST00000261407 C9orf116Q5BN46 136 aaPredicted RBP13.17□□□□□ -0.3
LPCAT3-201ENST00000261407 REG3AQ06141 175 aa13.16□□□□□ -0.3
LPCAT3-201ENST00000261407 KIAA0087Q14695 138 aa13.16□□□□□ -0.3
LPCAT3-201ENST00000261407 IGHV4-30-4P0DP06 118 aa13.15□□□□□ -0.3
LPCAT3-201ENST00000261407 GAGE2BQ13066 116 aa13.15□□□□□ -0.3
LPCAT3-201ENST00000261407 GAGE2EQ4V326 116 aa13.15□□□□□ -0.3
LPCAT3-201ENST00000261407 GAGE2DQ9UEU5 116 aa13.15□□□□□ -0.3
LPCAT3-201ENST00000261407 C9orf129Q5T035 196 aaKnown RBP13.15□□□□□ -0.3
LPCAT3-201ENST00000261407 CD164L2Q6UWJ8 174 aa13.15□□□□□ -0.3
LPCAT3-201ENST00000261407 PKD1L1Q8TDX9 2849 aa13.15□□□□□ -0.31
LPCAT3-201ENST00000261407 LINC00526Q96FQ7 95 aa13.13□□□□□ -0.31
LPCAT3-201ENST00000261407 FAM240AA0A1B0GVK7 77 aa13.11□□□□□ -0.31
LPCAT3-201ENST00000261407 MIFP14174 115 aa13.11□□□□□ -0.31
LPCAT3-201ENST00000261407 MALP21145 153 aa13.11□□□□□ -0.31
LPCAT3-201ENST00000261407 SLPIP03973 132 aa13.1□□□□□ -0.31
LPCAT3-201ENST00000261407 C6orf223Q8N319 242 aa13.1□□□□□ -0.31
LPCAT3-201ENST00000261407 SMCR5Q8TEV8 140 aa13.1□□□□□ -0.31
LPCAT3-201ENST00000261407 ANAPC13Q9BS18 74 aa13.1□□□□□ -0.31
LPCAT3-201ENST00000261407 LECT2O14960 151 aa13.1□□□□□ -0.31
LPCAT3-201ENST00000261407 NHLRC4P0CG21 123 aaPredicted RBP13.1□□□□□ -0.31
LPCAT3-201ENST00000261407 SPART-AS1P0CW21 52 aa13.1□□□□□ -0.31
LPCAT3-201ENST00000261407 Q8NDZ9 215 aa13.09□□□□□ -0.31
LPCAT3-201ENST00000261407 WFDC9Q8NEX5 89 aa13.09□□□□□ -0.31
LPCAT3-201ENST00000261407 C10orf25Q5T742 122 aa13.08□□□□□ -0.32
LPCAT3-201ENST00000261407 CFAP161Q6P656 301 aa13.08□□□□□ -0.32
LPCAT3-201ENST00000261407 DNAL4O96015 105 aa13.08□□□□□ -0.32
LPCAT3-201ENST00000261407 NANOS2P60321 138 aaKnown RBP13.08□□□□□ -0.32
LPCAT3-201ENST00000261407 OXLD1Q5BKU9 147 aa13.08□□□□□ -0.32
LPCAT3-201ENST00000261407 MRPL23Q16540 153 aaKnown RBP13.07□□□□□ -0.32
LPCAT3-201ENST00000261407 KLK12Q9UKR0 248 aa13.07□□□□□ -0.32
LPCAT3-201ENST00000261407 NDUFV3P56181 108 aaKnown RBP13.06□□□□□ -0.32
LPCAT3-201ENST00000261407 LINC01561Q8N1V8 128 aa13.06□□□□□ -0.32
LPCAT3-201ENST00000261407 RETNQ9HD89 108 aa13.06□□□□□ -0.32
LPCAT3-201ENST00000261407 H0YGX0 51 aa13.05□□□□□ -0.32
LPCAT3-201ENST00000261407 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
LPCAT3-201ENST00000261407 LELP1Q5T871 98 aa13.04□□□□□ -0.32
LPCAT3-201ENST00000261407 F8P00451 2351 aa13.04□□□□□ -0.32
LPCAT3-201ENST00000261407 FBN1P35555 2871 aaKnown RBP13.03□□□□□ -0.32
LPCAT3-201ENST00000261407 GAGE2AQ6NT46 116 aa13.03□□□□□ -0.32
LPCAT3-201ENST00000261407 Q6Q795 121 aa13.02□□□□□ -0.32
LPCAT3-201ENST00000261407 C14orf132Q9NPU4 83 aa13.02□□□□□ -0.32
LPCAT3-201ENST00000261407 TENM3Q9P273 2699 aa13.02□□□□□ -0.32
LPCAT3-201ENST00000261407 ENHOQ6UWT2 76 aa13.02□□□□□ -0.33
LPCAT3-201ENST00000261407 NCR3O14931 201 aa13.01□□□□□ -0.33
LPCAT3-201ENST00000261407 KRTAP10-11P60412 298 aa13.01□□□□□ -0.33
LPCAT3-201ENST00000261407 STAB1Q9NY15 2570 aa13.01□□□□□ -0.33
LPCAT3-201ENST00000261407 CMYA5Q8N3K9 4069 aa13.01□□□□□ -0.33
LPCAT3-201ENST00000261407 COX17Q14061 63 aa13□□□□□ -0.33
LPCAT3-201ENST00000261407 LYPD5Q6UWN5 251 aa13□□□□□ -0.33
LPCAT3-201ENST00000261407 ACYP1P07311 99 aa13□□□□□ -0.33
LPCAT3-201ENST00000261407 CXCL5P42830 114 aa13□□□□□ -0.33
LPCAT3-201ENST00000261407 SPAG11BQ08648 103 aa13□□□□□ -0.33
LPCAT3-201ENST00000261407 FLNBO75369 2602 aaKnown RBP13□□□□□ -0.33
LPCAT3-201ENST00000261407 WIPF1O43516 503 aa12.99□□□□□ -0.33
LPCAT3-201ENST00000261407 CYSRT1A8MQ03 144 aa12.99□□□□□ -0.33
LPCAT3-201ENST00000261407 PRR34Q9NV39 138 aa12.99□□□□□ -0.33
LPCAT3-201ENST00000261407 INAFM2P0DMQ5 153 aa12.97□□□□□ -0.33
LPCAT3-201ENST00000261407 KLK5Q9Y337 293 aaPredicted RBP12.97□□□□□ -0.33
LPCAT3-201ENST00000261407 TRBV7-7A0A0K0K1E9 115 aa12.96□□□□□ -0.33
LPCAT3-201ENST00000261407 NDUFC2O95298 119 aa12.96□□□□□ -0.33
LPCAT3-201ENST00000261407 WFDC10BQ8IUB3 73 aa12.96□□□□□ -0.34
LPCAT3-201ENST00000261407 SDIM1Q6ZPB5 146 aa12.95□□□□□ -0.34
LPCAT3-201ENST00000261407 CCDC179H3BU77 68 aa12.95□□□□□ -0.34
LPCAT3-201ENST00000261407 OBSCN-AS1Q96MR7 158 aa12.95□□□□□ -0.34
LPCAT3-201ENST00000261407 TMEM126AQ9H061 195 aa12.95□□□□□ -0.34
LPCAT3-201ENST00000261407 C6orf99Q4VX62 202 aa12.93□□□□□ -0.34
LPCAT3-201ENST00000261407 Q6ZTC4 211 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms