RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 IBA57-AS1B1ANH7 110 aa11.3□□□□□ -0.6
SDCBP-201ENST00000260130 TCL1BO95988 128 aa11.29□□□□□ -0.6
SDCBP-201ENST00000260130 TNP2Q05952 138 aa11.29□□□□□ -0.6
SDCBP-201ENST00000260130 Q6ZRN7 208 aaPredicted RBP11.29□□□□□ -0.6
SDCBP-201ENST00000260130 SCGB1C2P0DMR2 95 aa11.28□□□□□ -0.6
SDCBP-201ENST00000260130 PKD1P98161 4303 aa11.28□□□□□ -0.6
SDCBP-201ENST00000260130 A0A0J9YXV3 536 aa11.28□□□□□ -0.6
SDCBP-201ENST00000260130 A0A1B0GVY2 172 aa11.27□□□□□ -0.6
SDCBP-201ENST00000260130 A4D1N5 150 aa11.27□□□□□ -0.6
SDCBP-201ENST00000260130 TMEM262E9PQX1 116 aa11.27□□□□□ -0.6
SDCBP-201ENST00000260130 CHCHD5Q9BSY4 110 aa11.27□□□□□ -0.6
SDCBP-201ENST00000260130 CHCHD7Q9BUK0 85 aa11.27□□□□□ -0.6
SDCBP-201ENST00000260130 A0A0B4J2C4 111 aa11.27□□□□□ -0.61
SDCBP-201ENST00000260130 TEN1Q86WV5 123 aa11.27□□□□□ -0.61
SDCBP-201ENST00000260130 PPDPFLQ8WWR9 84 aa11.27□□□□□ -0.61
SDCBP-201ENST00000260130 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.26□□□□□ -0.61
SDCBP-201ENST00000260130 IGHV3-64A0A075B6Q5 118 aa11.25□□□□□ -0.61
SDCBP-201ENST00000260130 MRPS36P82909 103 aaKnown RBP11.25□□□□□ -0.61
SDCBP-201ENST00000260130 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
SDCBP-201ENST00000260130 ERG28Q9UKR5 140 aa11.25□□□□□ -0.61
SDCBP-201ENST00000260130 BIRC6Q9NR09 4857 aa11.24□□□□□ -0.61
SDCBP-201ENST00000260130 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
SDCBP-201ENST00000260130 Q9HAA7 133 aa11.24□□□□□ -0.61
SDCBP-201ENST00000260130 DNAH11Q96DT5 4516 aa11.24□□□□□ -0.61
SDCBP-201ENST00000260130 A0A0J9YXY3 114 aa11.23□□□□□ -0.61
SDCBP-201ENST00000260130 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
SDCBP-201ENST00000260130 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
SDCBP-201ENST00000260130 GAGE6Q13070 117 aa11.23□□□□□ -0.61
SDCBP-201ENST00000260130 SPANXA1Q9NS26 97 aa11.23□□□□□ -0.61
SDCBP-201ENST00000260130 M0QXV9 152 aa11.22□□□□□ -0.61
SDCBP-201ENST00000260130 TMEM243Q9BU79 118 aa11.22□□□□□ -0.61
SDCBP-201ENST00000260130 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
SDCBP-201ENST00000260130 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.62
SDCBP-201ENST00000260130 A0A1B0GV72 72 aa11.21□□□□□ -0.62
SDCBP-201ENST00000260130 CARD19Q96LW7 228 aa11.21□□□□□ -0.62
SDCBP-201ENST00000260130 TINCRA0A1B0GVN0 87 aa11.2□□□□□ -0.62
SDCBP-201ENST00000260130 FAM104AQ969W3 186 aa11.2□□□□□ -0.62
SDCBP-201ENST00000260130 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
SDCBP-201ENST00000260130 PSCAO43653 123 aa11.2□□□□□ -0.62
SDCBP-201ENST00000260130 EIF4EBP3O60516 100 aaPredicted RBP11.2□□□□□ -0.62
SDCBP-201ENST00000260130 Q1RN00 199 aa11.2□□□□□ -0.62
SDCBP-201ENST00000260130 UBE2WQ96B02 151 aa11.2□□□□□ -0.62
SDCBP-201ENST00000260130 SLC25A20O43772 301 aa11.19□□□□□ -0.62
SDCBP-201ENST00000260130 ANGP03950 147 aaKnown RBP11.19□□□□□ -0.62
SDCBP-201ENST00000260130 ANKRD29Q8N6D5 301 aa11.19□□□□□ -0.62
SDCBP-201ENST00000260130 UBE2L6O14933 153 aa11.18□□□□□ -0.62
SDCBP-201ENST00000260130 UBE2D4Q9Y2X8 147 aa11.18□□□□□ -0.62
SDCBP-201ENST00000260130 H7C2G1 150 aa11.18□□□□□ -0.62
SDCBP-201ENST00000260130 ATXN8Q156A1 80 aa11.18□□□□□ -0.62
SDCBP-201ENST00000260130 SPANXDQ9BXN6 97 aa11.18□□□□□ -0.62
SDCBP-201ENST00000260130 SPANXCQ9NY87 97 aa11.18□□□□□ -0.62
SDCBP-201ENST00000260130 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
SDCBP-201ENST00000260130 A0A1B0GUV1 79 aa11.17□□□□□ -0.62
SDCBP-201ENST00000260130 C9JAW5 83 aa11.17□□□□□ -0.62
SDCBP-201ENST00000260130 LITAFQ99732 161 aa11.17□□□□□ -0.62
SDCBP-201ENST00000260130 A0A087WTM6 91 aa11.17□□□□□ -0.62
SDCBP-201ENST00000260130 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
SDCBP-201ENST00000260130 ENHOQ6UWT2 76 aa11.16□□□□□ -0.62
SDCBP-201ENST00000260130 RMI2Q96E14 147 aa11.16□□□□□ -0.62
SDCBP-201ENST00000260130 CRPP02741 224 aa11.16□□□□□ -0.62
SDCBP-201ENST00000260130 PRSS2P07478 247 aa11.16□□□□□ -0.62
SDCBP-201ENST00000260130 SPINK8P0C7L1 97 aa11.16□□□□□ -0.62
SDCBP-201ENST00000260130 RNASE13Q5GAN3 156 aaKnown RBP11.16□□□□□ -0.62
SDCBP-201ENST00000260130 GEMIN7Q9H840 131 aaKnown RBP11.16□□□□□ -0.62
SDCBP-201ENST00000260130 DYNC1H1Q14204 4646 aaKnown RBP11.15□□□□□ -0.62
SDCBP-201ENST00000260130 Q6ZUT4 128 aa11.15□□□□□ -0.62
SDCBP-201ENST00000260130 LINC00269Q8N2A0 174 aa11.15□□□□□ -0.62
SDCBP-201ENST00000260130 IGKV2D-24A0A075B6R9 120 aa11.14□□□□□ -0.63
SDCBP-201ENST00000260130 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.14□□□□□ -0.63
SDCBP-201ENST00000260130 IGKV2-29A2NJV5 120 aaPredicted RBP11.14□□□□□ -0.63
SDCBP-201ENST00000260130 H7C423 109 aa11.14□□□□□ -0.63
SDCBP-201ENST00000260130 MIAQ16674 131 aa11.14□□□□□ -0.63
SDCBP-201ENST00000260130 PRR34Q9NV39 138 aa11.14□□□□□ -0.63
SDCBP-201ENST00000260130 IGLV4-60A0A075B6I1 120 aa11.14□□□□□ -0.63
SDCBP-201ENST00000260130 LRCOL1A6NCL2 159 aa11.13□□□□□ -0.63
SDCBP-201ENST00000260130 CKS1BP61024 79 aa11.13□□□□□ -0.63
SDCBP-201ENST00000260130 LINC01620Q4KN68 170 aa11.13□□□□□ -0.63
SDCBP-201ENST00000260130 TIMM17BO60830 172 aa11.13□□□□□ -0.63
SDCBP-201ENST00000260130 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
SDCBP-201ENST00000260130 LINC01600Q96MT4 127 aa11.13□□□□□ -0.63
SDCBP-201ENST00000260130 MT-ATP8P03928 68 aa11.12□□□□□ -0.63
SDCBP-201ENST00000260130 XGP55808 180 aa11.12□□□□□ -0.63
SDCBP-201ENST00000260130 C1orf43Q9BWL3 253 aa11.12□□□□□ -0.63
SDCBP-201ENST00000260130 TRIAP1O43715 76 aa11.11□□□□□ -0.63
SDCBP-201ENST00000260130 COX6CP09669 75 aa11.11□□□□□ -0.63
SDCBP-201ENST00000260130 REG3AQ06141 175 aa11.11□□□□□ -0.63
SDCBP-201ENST00000260130 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
SDCBP-201ENST00000260130 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
SDCBP-201ENST00000260130 IFITM1P13164 125 aa11.11□□□□□ -0.63
SDCBP-201ENST00000260130 DGAT2L7PQ6IED9 249 aa11.1□□□□□ -0.63
SDCBP-201ENST00000260130 IGLV5-45A0A087WSX0 123 aa11.1□□□□□ -0.63
SDCBP-201ENST00000260130 TRBV10-2A0A0K0K1G8 114 aa11.1□□□□□ -0.63
SDCBP-201ENST00000260130 C16orf90A8MZG2 172 aa11.1□□□□□ -0.63
SDCBP-201ENST00000260130 DNAH5Q8TE73 4624 aa11.09□□□□□ -0.63
SDCBP-201ENST00000260130 NDUFA1O15239 70 aa11.09□□□□□ -0.63
SDCBP-201ENST00000260130 CDKN2A-AS1Q9UH64 79 aa11.09□□□□□ -0.63
SDCBP-201ENST00000260130 CIRBPQ14011 172 aaKnown RBP11.08□□□□□ -0.64
SDCBP-201ENST00000260130 NTN5Q8WTR8 489 aaPredicted RBP11.08□□□□□ -0.64
SDCBP-201ENST00000260130 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
SDCBP-201ENST00000260130 HERVK_113P63121 156 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms