RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 C3orf22Q8N5N4 141 aa11.85□□□□□ -0.51
CDK4-201ENST00000257904 MTORP42345 2549 aa11.85□□□□□ -0.51
CDK4-201ENST00000257904 OBSCN-AS1Q96MR7 158 aa11.85□□□□□ -0.51
CDK4-201ENST00000257904 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
CDK4-201ENST00000257904 NOTCH3Q9UM47 2321 aa11.84□□□□□ -0.51
CDK4-201ENST00000257904 RNASE1P07998 156 aaKnown RBP11.84□□□□□ -0.51
CDK4-201ENST00000257904 C14orf132Q9NPU4 83 aa11.84□□□□□ -0.51
CDK4-201ENST00000257904 UQCRQO14949 82 aa11.83□□□□□ -0.51
CDK4-201ENST00000257904 OTOGQ6ZRI0 2925 aa11.83□□□□□ -0.52
CDK4-201ENST00000257904 PAX4O43316 350 aa11.83□□□□□ -0.52
CDK4-201ENST00000257904 LINC01006Q8NI28 216 aa11.83□□□□□ -0.52
CDK4-201ENST00000257904 LECT2O14960 151 aa11.82□□□□□ -0.52
CDK4-201ENST00000257904 LY6G6DO95868 133 aa11.82□□□□□ -0.52
CDK4-201ENST00000257904 C9orf153Q5TBE3 101 aa11.82□□□□□ -0.52
CDK4-201ENST00000257904 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
CDK4-201ENST00000257904 HIST1H4AP62805 103 aaKnown RBP11.81□□□□□ -0.52
CDK4-201ENST00000257904 C16orf95Q9H693 158 aa11.81□□□□□ -0.52
CDK4-201ENST00000257904 KLK5Q9Y337 293 aaPredicted RBP11.81□□□□□ -0.52
CDK4-201ENST00000257904 HIVEP2P31629 2446 aa11.81□□□□□ -0.52
CDK4-201ENST00000257904 IGLV1-51P01701 117 aa11.8□□□□□ -0.52
CDK4-201ENST00000257904 OR13C6PQ8NH95 151 aa11.8□□□□□ -0.52
CDK4-201ENST00000257904 LINC00526Q96FQ7 95 aa11.8□□□□□ -0.52
CDK4-201ENST00000257904 SETXQ7Z333 2677 aaKnown RBP11.8□□□□□ -0.52
CDK4-201ENST00000257904 HILS1P60008 231 aa11.79□□□□□ -0.52
CDK4-201ENST00000257904 C6orf226Q5I0X4 101 aa11.79□□□□□ -0.52
CDK4-201ENST00000257904 C11orf68Q9H3H3 251 aaKnown RBP11.79□□□□□ -0.52
CDK4-201ENST00000257904 NCR3O14931 201 aa11.77□□□□□ -0.52
CDK4-201ENST00000257904 COX7CP15954 63 aa11.77□□□□□ -0.52
CDK4-201ENST00000257904 LINC00846Q9NV44 126 aa11.77□□□□□ -0.52
CDK4-201ENST00000257904 JMJD1CQ15652 2540 aa11.77□□□□□ -0.53
CDK4-201ENST00000257904 SLPIP03973 132 aa11.77□□□□□ -0.53
CDK4-201ENST00000257904 Q6JHZ5 121 aa11.77□□□□□ -0.53
CDK4-201ENST00000257904 ATOX1O00244 68 aa11.76□□□□□ -0.53
CDK4-201ENST00000257904 XCL1P47992 114 aa11.76□□□□□ -0.53
CDK4-201ENST00000257904 C2orf48Q96LS8 159 aa11.76□□□□□ -0.53
CDK4-201ENST00000257904 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
CDK4-201ENST00000257904 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
CDK4-201ENST00000257904 Q8IZM0 81 aa11.75□□□□□ -0.53
CDK4-201ENST00000257904 ORMDL1Q9P0S3 153 aa11.75□□□□□ -0.53
CDK4-201ENST00000257904 NIPBLQ6KC79 2804 aaeCLIP11.75□□□□□ -0.53
CDK4-201ENST00000257904 SS18Q15532 418 aa11.74□□□□□ -0.53
CDK4-201ENST00000257904 IGKV3D-7A0A0C4DH55 119 aa11.74□□□□□ -0.53
CDK4-201ENST00000257904 SETD2Q9BYW2 2564 aaPredicted RBP11.73□□□□□ -0.53
CDK4-201ENST00000257904 A0A1B0GUV1 79 aa11.73□□□□□ -0.53
CDK4-201ENST00000257904 GYPEP15421 78 aa11.73□□□□□ -0.53
CDK4-201ENST00000257904 KIR2DL5BQ8NHK3 375 aa11.73□□□□□ -0.53
CDK4-201ENST00000257904 RPL18AQ02543 176 aaKnown RBP11.72□□□□□ -0.53
CDK4-201ENST00000257904 LINC00612Q8N6U2 182 aa11.72□□□□□ -0.53
CDK4-201ENST00000257904 LINC00167Q96N53 147 aa11.72□□□□□ -0.53
CDK4-201ENST00000257904 CRYGAP11844 174 aa11.71□□□□□ -0.53
CDK4-201ENST00000257904 LINC01561Q8N1V8 128 aa11.71□□□□□ -0.53
CDK4-201ENST00000257904 INAFM1C9JVW0 142 aa11.71□□□□□ -0.54
CDK4-201ENST00000257904 NANOS2P60321 138 aaKnown RBP11.71□□□□□ -0.54
CDK4-201ENST00000257904 CLPSL2Q6UWE3 100 aa11.71□□□□□ -0.54
CDK4-201ENST00000257904 A0A1B0GX51 115 aa11.69□□□□□ -0.54
CDK4-201ENST00000257904 HIVEP1P15822 2718 aa11.69□□□□□ -0.54
CDK4-201ENST00000257904 CCKP06307 115 aa11.69□□□□□ -0.54
CDK4-201ENST00000257904 PRR3P79522 188 aaKnown RBP11.68□□□□□ -0.54
CDK4-201ENST00000257904 A0A087WVE0 104 aa11.67□□□□□ -0.54
CDK4-201ENST00000257904 Q8N814 137 aa11.67□□□□□ -0.54
CDK4-201ENST00000257904 NSD1Q96L73 2696 aaPredicted RBP11.67□□□□□ -0.54
CDK4-201ENST00000257904 NDUFC2O95298 119 aa11.67□□□□□ -0.54
CDK4-201ENST00000257904 JMJD7-PLA2G4BH0Y9G9 81 aa11.66□□□□□ -0.54
CDK4-201ENST00000257904 COX17Q14061 63 aa11.66□□□□□ -0.54
CDK4-201ENST00000257904 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
CDK4-201ENST00000257904 PRO0255Q9UI72 69 aa11.66□□□□□ -0.54
CDK4-201ENST00000257904 A0A096LPF7 62 aa11.65□□□□□ -0.54
CDK4-201ENST00000257904 TMEM256-PLSCR3K7ERE1 68 aa11.64□□□□□ -0.55
CDK4-201ENST00000257904 hADV29S1A0JD25 119 aa11.64□□□□□ -0.55
CDK4-201ENST00000257904 KRTAP10-3P60369 221 aa11.64□□□□□ -0.55
CDK4-201ENST00000257904 CD164L2Q6UWJ8 174 aa11.64□□□□□ -0.55
CDK4-201ENST00000257904 SERP2Q8N6R1 65 aa11.64□□□□□ -0.55
CDK4-201ENST00000257904 FN1P02751 2386 aaKnown RBP11.64□□□□□ -0.55
CDK4-201ENST00000257904 FLNBO75369 2602 aaKnown RBP11.64□□□□□ -0.55
CDK4-201ENST00000257904 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
CDK4-201ENST00000257904 LINC00269Q8N2A0 174 aa11.63□□□□□ -0.55
CDK4-201ENST00000257904 X6R8D5 127 aa11.63□□□□□ -0.55
CDK4-201ENST00000257904 USP17L23D6RBM5 183 aa11.63□□□□□ -0.55
CDK4-201ENST00000257904 IGHV4-28A0A0C4DH34 117 aa11.62□□□□□ -0.55
CDK4-201ENST00000257904 S100A7L2Q5SY68 101 aa11.62□□□□□ -0.55
CDK4-201ENST00000257904 CHCHD10Q8WYQ3 142 aaPredicted RBP11.61□□□□□ -0.55
CDK4-201ENST00000257904 CYSTM1Q9H1C7 97 aa11.61□□□□□ -0.55
CDK4-201ENST00000257904 C9orf116Q5BN46 136 aaPredicted RBP11.59□□□□□ -0.55
CDK4-201ENST00000257904 UPK3BQ9BT76 320 aa11.59□□□□□ -0.55
CDK4-201ENST00000257904 IGLV10-54A0A075B6I4 117 aa11.59□□□□□ -0.55
CDK4-201ENST00000257904 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
CDK4-201ENST00000257904 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
CDK4-201ENST00000257904 ATP5EP2Q5VTU8 51 aa11.59□□□□□ -0.55
CDK4-201ENST00000257904 Q8NDZ9 215 aa11.59□□□□□ -0.55
CDK4-201ENST00000257904 J3KT08 172 aa11.58□□□□□ -0.56
CDK4-201ENST00000257904 LOC107984640A0A0U1RRK4 108 aa11.58□□□□□ -0.56
CDK4-201ENST00000257904 ANGP03950 147 aaKnown RBP11.58□□□□□ -0.56
CDK4-201ENST00000257904 REG3AQ06141 175 aa11.58□□□□□ -0.56
CDK4-201ENST00000257904 Q8N3U1 123 aa11.58□□□□□ -0.56
CDK4-201ENST00000257904 LYPD5Q6UWN5 251 aa11.56□□□□□ -0.56
CDK4-201ENST00000257904 LYRM9A8MSI8 78 aa11.55□□□□□ -0.56
CDK4-201ENST00000257904 LINC00575Q6W349 94 aa11.55□□□□□ -0.56
CDK4-201ENST00000257904 TMEM258P61165 79 aa11.54□□□□□ -0.56
CDK4-201ENST00000257904 LINC00482Q8N8I6 264 aa11.54□□□□□ -0.56
CDK4-201ENST00000257904 RPS28P62857 69 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms