RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 J3KT08 172 aa13.28□□□□□ -0.28
SNX4-201ENST00000251775 CSNK1G2-AS1Q8NCQ2 148 aa13.28□□□□□ -0.28
SNX4-201ENST00000251775 LINC00846Q9NV44 126 aa13.28□□□□□ -0.28
SNX4-201ENST00000251775 HILS1P60008 231 aa13.27□□□□□ -0.29
SNX4-201ENST00000251775 Q6JHZ5 121 aa13.27□□□□□ -0.29
SNX4-201ENST00000251775 C16orf74Q96GX8 76 aa13.27□□□□□ -0.29
SNX4-201ENST00000251775 TOMM7Q9P0U1 55 aa13.27□□□□□ -0.29
SNX4-201ENST00000251775 CCL18P55774 89 aa13.26□□□□□ -0.29
SNX4-201ENST00000251775 H0YGX0 51 aa13.26□□□□□ -0.29
SNX4-201ENST00000251775 UBE2L6O14933 153 aa13.26□□□□□ -0.29
SNX4-201ENST00000251775 TMEM243Q9BU79 118 aa13.26□□□□□ -0.29
SNX4-201ENST00000251775 C2CD3Q4AC94 2353 aa13.25□□□□□ -0.29
SNX4-201ENST00000251775 LOC100131303A0A0U1RQF7 123 aa13.25□□□□□ -0.29
SNX4-201ENST00000251775 J3QKU1 62 aa13.25□□□□□ -0.29
SNX4-201ENST00000251775 LINC00158P58513 81 aa13.25□□□□□ -0.29
SNX4-201ENST00000251775 TRGV2A0A075B6R0 118 aa13.24□□□□□ -0.29
SNX4-201ENST00000251775 SMR3AQ99954 134 aa13.24□□□□□ -0.29
SNX4-201ENST00000251775 LECT2O14960 151 aa13.24□□□□□ -0.29
SNX4-201ENST00000251775 FAM19A5Q7Z5A7 132 aaPredicted RBP13.24□□□□□ -0.29
SNX4-201ENST00000251775 A0A087WVE0 104 aa13.23□□□□□ -0.29
SNX4-201ENST00000251775 NCR3O14931 201 aa13.22□□□□□ -0.29
SNX4-201ENST00000251775 KRTAP10-3P60369 221 aa13.22□□□□□ -0.29
SNX4-201ENST00000251775 LINC01561Q8N1V8 128 aa13.22□□□□□ -0.29
SNX4-201ENST00000251775 RPS28P62857 69 aaKnown RBP13.21□□□□□ -0.29
SNX4-201ENST00000251775 SERP2Q8N6R1 65 aa13.21□□□□□ -0.29
SNX4-201ENST00000251775 IGKV3OR2-268A0A0C4DH90 116 aa13.2□□□□□ -0.3
SNX4-201ENST00000251775 UPK3BQ9BT76 320 aa13.2□□□□□ -0.3
SNX4-201ENST00000251775 TRBV6-4A0A1B0GX49 114 aa13.2□□□□□ -0.3
SNX4-201ENST00000251775 SLPIP03973 132 aa13.2□□□□□ -0.3
SNX4-201ENST00000251775 HELZ2Q9BYK8 2649 aaKnown RBP13.2□□□□□ -0.3
SNX4-201ENST00000251775 IBA57-AS1B1ANH7 110 aa13.19□□□□□ -0.3
SNX4-201ENST00000251775 IGHV3OR16-9A0A0B4J2B5 98 aa13.18□□□□□ -0.3
SNX4-201ENST00000251775 TRGV4A0A0C4DH28 118 aa13.18□□□□□ -0.3
SNX4-201ENST00000251775 UNC79Q9P2D8 2635 aa13.18□□□□□ -0.3
SNX4-201ENST00000251775 PFN2P35080 140 aa13.18□□□□□ -0.3
SNX4-201ENST00000251775 SS18Q15532 418 aa13.18□□□□□ -0.3
SNX4-201ENST00000251775 FHL2Q14192 279 aa13.17□□□□□ -0.3
SNX4-201ENST00000251775 IGLV4-60A0A075B6I1 120 aa13.17□□□□□ -0.3
SNX4-201ENST00000251775 USP17L23D6RBM5 183 aa13.17□□□□□ -0.3
SNX4-201ENST00000251775 SMIM9A6NGZ8 99 aa13.16□□□□□ -0.3
SNX4-201ENST00000251775 PAX4O43316 350 aa13.16□□□□□ -0.3
SNX4-201ENST00000251775 OR13C6PQ8NH95 151 aa13.16□□□□□ -0.3
SNX4-201ENST00000251775 KIR2DL5BQ8NHK3 375 aa13.16□□□□□ -0.3
SNX4-201ENST00000251775 HIVEP2P31629 2446 aa13.16□□□□□ -0.3
SNX4-201ENST00000251775 TMEM258P61165 79 aa13.15□□□□□ -0.3
SNX4-201ENST00000251775 FASNP49327 2511 aaKnown RBP13.15□□□□□ -0.3
SNX4-201ENST00000251775 C5orf47Q569G3 176 aa13.15□□□□□ -0.3
SNX4-201ENST00000251775 A0A087WZ39 114 aa13.14□□□□□ -0.31
SNX4-201ENST00000251775 LY6G6DO95868 133 aa13.14□□□□□ -0.31
SNX4-201ENST00000251775 DPH3Q96FX2 82 aa13.14□□□□□ -0.31
SNX4-201ENST00000251775 ORMDL1Q9P0S3 153 aa13.14□□□□□ -0.31
SNX4-201ENST00000251775 KMT2BQ9UMN6 2715 aaPredicted RBP13.14□□□□□ -0.31
SNX4-201ENST00000251775 LINC00482Q8N8I6 264 aa13.13□□□□□ -0.31
SNX4-201ENST00000251775 CCKP06307 115 aa13.13□□□□□ -0.31
SNX4-201ENST00000251775 TRBV6-8A0A0A6YYG3 113 aa13.11□□□□□ -0.31
SNX4-201ENST00000251775 DEFB130BP0DP73 79 aa13.11□□□□□ -0.31
SNX4-201ENST00000251775 DEFB130AP0DP74 79 aa13.11□□□□□ -0.31
SNX4-201ENST00000251775 FN1P02751 2386 aaKnown RBP13.1□□□□□ -0.31
SNX4-201ENST00000251775 OXTP01178 125 aa13.09□□□□□ -0.31
SNX4-201ENST00000251775 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
SNX4-201ENST00000251775 LINC00167Q96N53 147 aa13.09□□□□□ -0.31
SNX4-201ENST00000251775 C11orf68Q9H3H3 251 aaKnown RBP13.09□□□□□ -0.31
SNX4-201ENST00000251775 DSCR8Q96T75 97 aa13.08□□□□□ -0.32
SNX4-201ENST00000251775 C6orf226Q5I0X4 101 aa13.06□□□□□ -0.32
SNX4-201ENST00000251775 LINC00612Q8N6U2 182 aa13.06□□□□□ -0.32
SNX4-201ENST00000251775 NANOS2P60321 138 aaKnown RBP13.06□□□□□ -0.32
SNX4-201ENST00000251775 X6R8D5 127 aa13.06□□□□□ -0.32
SNX4-201ENST00000251775 WFDC9Q8NEX5 89 aa13.05□□□□□ -0.32
SNX4-201ENST00000251775 LINC00959A0A1B0GUT2 108 aa13.05□□□□□ -0.32
SNX4-201ENST00000251775 JMJD7-PLA2G4BH0Y9G9 81 aa13.04□□□□□ -0.32
SNX4-201ENST00000251775 S100A7L2Q5SY68 101 aa13.04□□□□□ -0.32
SNX4-201ENST00000251775 Q8N814 137 aa13.04□□□□□ -0.32
SNX4-201ENST00000251775 GHRHP01286 108 aa13.03□□□□□ -0.32
SNX4-201ENST00000251775 GYPEP15421 78 aa13.03□□□□□ -0.32
SNX4-201ENST00000251775 PRR3P79522 188 aaKnown RBP13.03□□□□□ -0.32
SNX4-201ENST00000251775 ATP5EP2Q5VTU8 51 aa13.02□□□□□ -0.33
SNX4-201ENST00000251775 FAM19A1Q7Z5A9 133 aa13.02□□□□□ -0.33
SNX4-201ENST00000251775 TRAV23DV6A0A075B6W5 121 aa13.01□□□□□ -0.33
SNX4-201ENST00000251775 LYPD5Q6UWN5 251 aa13.01□□□□□ -0.33
SNX4-201ENST00000251775 TMEM256-PLSCR3K7ERE1 68 aa13□□□□□ -0.33
SNX4-201ENST00000251775 XCL1P47992 114 aa13□□□□□ -0.33
SNX4-201ENST00000251775 ENHOQ6UWT2 76 aa13□□□□□ -0.33
SNX4-201ENST00000251775 GCN1Q92616 2671 aaKnown RBP13□□□□□ -0.33
SNX4-201ENST00000251775 INAFM1C9JVW0 142 aa12.99□□□□□ -0.33
SNX4-201ENST00000251775 Q8IZM0 81 aa12.99□□□□□ -0.33
SNX4-201ENST00000251775 HECTD1Q9ULT8 2610 aa12.98□□□□□ -0.33
SNX4-201ENST00000251775 C9orf66Q5T8R8 295 aa12.97□□□□□ -0.33
SNX4-201ENST00000251775 VWFP04275 2813 aa12.97□□□□□ -0.33
SNX4-201ENST00000251775 PRO0255Q9UI72 69 aa12.97□□□□□ -0.33
SNX4-201ENST00000251775 A0A096LPF7 62 aa12.96□□□□□ -0.33
SNX4-201ENST00000251775 NBEAL2Q6ZNJ1 2754 aa12.96□□□□□ -0.34
SNX4-201ENST00000251775 DEFB4AO15263 64 aa12.95□□□□□ -0.34
SNX4-201ENST00000251775 Q5XG85 94 aa12.95□□□□□ -0.34
SNX4-201ENST00000251775 DEFB135Q30KP9 77 aa12.95□□□□□ -0.34
SNX4-201ENST00000251775 TRBV10-3A0A0K0K1G6 114 aa12.94□□□□□ -0.34
SNX4-201ENST00000251775 C4orf26Q17RF5 130 aa12.94□□□□□ -0.34
SNX4-201ENST00000251775 NOTCH2Q04721 2471 aa12.94□□□□□ -0.34
SNX4-201ENST00000251775 NDUFC2O95298 119 aa12.94□□□□□ -0.34
SNX4-201ENST00000251775 CLPSL2Q6UWE3 100 aa12.94□□□□□ -0.34
SNX4-201ENST00000251775 UBL5Q9BZL1 73 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms