RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 TRAV13-2A0A0B4J235 113 aa17.71■□□□□ 0.43
RAB40C-201ENST00000248139 J3QKU1 62 aa17.71■□□□□ 0.43
RAB40C-201ENST00000248139 DEFB121Q5J5C9 76 aa17.71■□□□□ 0.43
RAB40C-201ENST00000248139 KIR2DL5BQ8NHK3 375 aa17.71■□□□□ 0.43
RAB40C-201ENST00000248139 ATP5G1P05496 136 aa17.7■□□□□ 0.42
RAB40C-201ENST00000248139 A0A087WYN8 130 aa17.7■□□□□ 0.42
RAB40C-201ENST00000248139 PAX4O43316 350 aa17.7■□□□□ 0.42
RAB40C-201ENST00000248139 IGLV10-54A0A075B6I4 117 aa17.69■□□□□ 0.42
RAB40C-201ENST00000248139 LY6G6DO95868 133 aa17.68■□□□□ 0.42
RAB40C-201ENST00000248139 RPL28P46779 137 aaKnown RBP17.68■□□□□ 0.42
RAB40C-201ENST00000248139 NDUFV3P56181 108 aaKnown RBP17.68■□□□□ 0.42
RAB40C-201ENST00000248139 OR13C6PQ8NH95 151 aa17.68■□□□□ 0.42
RAB40C-201ENST00000248139 TRACP01848 142 aa17.67■□□□□ 0.42
RAB40C-201ENST00000248139 NSD1Q96L73 2696 aaPredicted RBP17.67■□□□□ 0.42
RAB40C-201ENST00000248139 LINC00612Q8N6U2 182 aa17.66■□□□□ 0.42
RAB40C-201ENST00000248139 PRO0255Q9UI72 69 aa17.66■□□□□ 0.42
RAB40C-201ENST00000248139 PRR3P79522 188 aaKnown RBP17.66■□□□□ 0.42
RAB40C-201ENST00000248139 IBA57-AS1B1ANH7 110 aa17.65■□□□□ 0.42
RAB40C-201ENST00000248139 C9orf129Q5T035 196 aaKnown RBP17.65■□□□□ 0.42
RAB40C-201ENST00000248139 LINC00269Q8N2A0 174 aa17.65■□□□□ 0.42
RAB40C-201ENST00000248139 SMCR5Q8TEV8 140 aa17.64■□□□□ 0.41
RAB40C-201ENST00000248139 KMT2BQ9UMN6 2715 aaPredicted RBP17.64■□□□□ 0.41
RAB40C-201ENST00000248139 SS18Q15532 418 aa17.63■□□□□ 0.41
RAB40C-201ENST00000248139 INAFM1C9JVW0 142 aa17.62■□□□□ 0.41
RAB40C-201ENST00000248139 FAM240AA0A1B0GVK7 77 aa17.61■□□□□ 0.41
RAB40C-201ENST00000248139 SLPIP03973 132 aa17.61■□□□□ 0.41
RAB40C-201ENST00000248139 MALP21145 153 aa17.59■□□□□ 0.41
RAB40C-201ENST00000248139 C9orf116Q5BN46 136 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-201ENST00000248139 TEP1Q99973 2627 aaKnown RBP17.59■□□□□ 0.41
RAB40C-201ENST00000248139 HTN3P15516 51 aa17.58■□□□□ 0.41
RAB40C-201ENST00000248139 CELA1Q9UNI1 258 aa17.58■□□□□ 0.41
RAB40C-201ENST00000248139 HIVEP1P15822 2718 aa17.58■□□□□ 0.4
RAB40C-201ENST00000248139 A0A1B0GUV1 79 aa17.57■□□□□ 0.4
RAB40C-201ENST00000248139 CCDC179H3BU77 68 aa17.57■□□□□ 0.4
RAB40C-201ENST00000248139 LECT2O14960 151 aa17.57■□□□□ 0.4
RAB40C-201ENST00000248139 ANGP03950 147 aaKnown RBP17.57■□□□□ 0.4
RAB40C-201ENST00000248139 IGHV4-28A0A0C4DH34 117 aa17.57■□□□□ 0.4
RAB40C-201ENST00000248139 GAGE2AQ6NT46 116 aa17.56■□□□□ 0.4
RAB40C-201ENST00000248139 B5MCH6 92 aa17.56■□□□□ 0.4
RAB40C-201ENST00000248139 DNAL4O96015 105 aa17.56■□□□□ 0.4
RAB40C-201ENST00000248139 PPDPFQ9H3Y8 114 aa17.55■□□□□ 0.4
RAB40C-201ENST00000248139 Q6Q795 121 aa17.55■□□□□ 0.4
RAB40C-201ENST00000248139 LINC00526Q96FQ7 95 aa17.54■□□□□ 0.4
RAB40C-201ENST00000248139 CHCHD10Q8WYQ3 142 aaPredicted RBP17.54■□□□□ 0.4
RAB40C-201ENST00000248139 Q8IZM0 81 aa17.52■□□□□ 0.4
RAB40C-201ENST00000248139 SMIM9A6NGZ8 99 aa17.52■□□□□ 0.39
RAB40C-201ENST00000248139 DAD1P61803 113 aa17.52■□□□□ 0.39
RAB40C-201ENST00000248139 C14orf132Q9NPU4 83 aa17.52■□□□□ 0.39
RAB40C-201ENST00000248139 C9orf66Q5T8R8 295 aa17.51■□□□□ 0.39
RAB40C-201ENST00000248139 REG3AQ06141 175 aa17.5■□□□□ 0.39
RAB40C-201ENST00000248139 KIAA0087Q14695 138 aa17.5■□□□□ 0.39
RAB40C-201ENST00000248139 MRPL23Q16540 153 aaKnown RBP17.5■□□□□ 0.39
RAB40C-201ENST00000248139 SS18L2Q9UHA2 77 aa17.5■□□□□ 0.39
RAB40C-201ENST00000248139 LYRM9A8MSI8 78 aa17.49■□□□□ 0.39
RAB40C-201ENST00000248139 PKD1L1Q8TDX9 2849 aa17.48■□□□□ 0.39
RAB40C-201ENST00000248139 NCR3O14931 201 aa17.48■□□□□ 0.39
RAB40C-201ENST00000248139 C6orf223Q8N319 242 aa17.47■□□□□ 0.39
RAB40C-201ENST00000248139 Q8NDZ9 215 aa17.47■□□□□ 0.39
RAB40C-201ENST00000248139 ACYP1P07311 99 aa17.46■□□□□ 0.39
RAB40C-201ENST00000248139 CD164L2Q6UWJ8 174 aa17.46■□□□□ 0.39
RAB40C-201ENST00000248139 H0YGX0 51 aa17.45■□□□□ 0.38
RAB40C-201ENST00000248139 CFAP161Q6P656 301 aa17.45■□□□□ 0.38
RAB40C-201ENST00000248139 TRBV7-7A0A0K0K1E9 115 aa17.45■□□□□ 0.38
RAB40C-201ENST00000248139 NANOS2P60321 138 aaKnown RBP17.45■□□□□ 0.38
RAB40C-201ENST00000248139 FAM236AA0A1B0GUQ0 79 aa17.44■□□□□ 0.38
RAB40C-201ENST00000248139 FAM236BA0A1B0GV22 79 aa17.44■□□□□ 0.38
RAB40C-201ENST00000248139 C10orf25Q5T742 122 aa17.43■□□□□ 0.38
RAB40C-201ENST00000248139 Q8NAQ8 132 aa17.43■□□□□ 0.38
RAB40C-201ENST00000248139 INAFM2P0DMQ5 153 aa17.42■□□□□ 0.38
RAB40C-201ENST00000248139 C3orf56Q8N813 242 aa17.42■□□□□ 0.38
RAB40C-201ENST00000248139 APOC4P55056 127 aa17.41■□□□□ 0.38
RAB40C-201ENST00000248139 LINC00643Q86TS7 51 aa17.4■□□□□ 0.38
RAB40C-201ENST00000248139 UNQ6190/PRO20217Q6UXQ8 127 aa17.4■□□□□ 0.38
RAB40C-201ENST00000248139 KLK12Q9UKR0 248 aa17.39■□□□□ 0.37
RAB40C-201ENST00000248139 IGHV4-30-4P0DP06 118 aa17.35■□□□□ 0.37
RAB40C-201ENST00000248139 SDIM1Q6ZPB5 146 aa17.34■□□□□ 0.37
RAB40C-201ENST00000248139 ANK2Q01484 3957 aa17.34■□□□□ 0.37
RAB40C-201ENST00000248139 LINC00846Q9NV44 126 aa17.33■□□□□ 0.36
RAB40C-201ENST00000248139 SPART-AS1P0CW21 52 aa17.33■□□□□ 0.36
RAB40C-201ENST00000248139 ORMDL1Q9P0S3 153 aa17.33■□□□□ 0.36
RAB40C-201ENST00000248139 SPAG11BQ08648 103 aa17.32■□□□□ 0.36
RAB40C-201ENST00000248139 IGKV3D-7A0A0C4DH55 119 aa17.32■□□□□ 0.36
RAB40C-201ENST00000248139 C6orf99Q4VX62 202 aa17.31■□□□□ 0.36
RAB40C-201ENST00000248139 LINC01561Q8N1V8 128 aa17.31■□□□□ 0.36
RAB40C-201ENST00000248139 KLK5Q9Y337 293 aaPredicted RBP17.31■□□□□ 0.36
RAB40C-201ENST00000248139 MIFP14174 115 aa17.3■□□□□ 0.36
RAB40C-201ENST00000248139 CYSRT1A8MQ03 144 aa17.3■□□□□ 0.36
RAB40C-201ENST00000248139 RETNQ9HD89 108 aa17.3■□□□□ 0.36
RAB40C-201ENST00000248139 Q8N814 137 aa17.29■□□□□ 0.36
RAB40C-201ENST00000248139 OBSCN-AS1Q96MR7 158 aa17.29■□□□□ 0.36
RAB40C-201ENST00000248139 CXCL5P42830 114 aa17.28■□□□□ 0.36
RAB40C-201ENST00000248139 TMEM126AQ9H061 195 aa17.28■□□□□ 0.36
RAB40C-201ENST00000248139 ENHOQ6UWT2 76 aa17.28■□□□□ 0.36
RAB40C-201ENST00000248139 COX17Q14061 63 aa17.27■□□□□ 0.36
RAB40C-201ENST00000248139 LELP1Q5T871 98 aa17.27■□□□□ 0.36
RAB40C-201ENST00000248139 S100A7L2Q5SY68 101 aa17.27■□□□□ 0.35
RAB40C-201ENST00000248139 IMUPQ9GZP8 106 aa17.27■□□□□ 0.35
RAB40C-201ENST00000248139 TENM3Q9P273 2699 aa17.26■□□□□ 0.35
RAB40C-201ENST00000248139 NDUFC2O95298 119 aa17.25■□□□□ 0.35
RAB40C-201ENST00000248139 OXLD1Q5BKU9 147 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms