RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 DEFB131BA0A096LNP1 70 aa15.87■□□□□ 0.13
MSX2-201ENST00000239243 MALP21145 153 aa15.87■□□□□ 0.13
MSX2-201ENST00000239243 NANOS2P60321 138 aaKnown RBP15.87■□□□□ 0.13
MSX2-201ENST00000239243 CXCL5P42830 114 aa15.86■□□□□ 0.13
MSX2-201ENST00000239243 LINC00158P58513 81 aa15.86■□□□□ 0.13
MSX2-201ENST00000239243 MIR7-3HGQ8N6C7 128 aa15.86■□□□□ 0.13
MSX2-201ENST00000239243 RPL13AP40429 203 aaKnown RBP15.86■□□□□ 0.13
MSX2-201ENST00000239243 PRO0461Q9UI25 63 aa15.86■□□□□ 0.13
MSX2-201ENST00000239243 KLK12Q9UKR0 248 aa15.86■□□□□ 0.13
MSX2-201ENST00000239243 COX6CP09669 75 aa15.85■□□□□ 0.13
MSX2-201ENST00000239243 TM2D3Q9BRN9 247 aa15.85■□□□□ 0.13
MSX2-201ENST00000239243 CKS1BP61024 79 aa15.84■□□□□ 0.13
MSX2-201ENST00000239243 K7EIL1 84 aa15.83■□□□□ 0.13
MSX2-201ENST00000239243 FOXI1Q12951 378 aa15.83■□□□□ 0.13
MSX2-201ENST00000239243 WFDC2Q14508 124 aa15.83■□□□□ 0.13
MSX2-201ENST00000239243 CFAP161Q6P656 301 aa15.83■□□□□ 0.13
MSX2-201ENST00000239243 TRIAP1O43715 76 aa15.83■□□□□ 0.12
MSX2-201ENST00000239243 CRPP02741 224 aa15.83■□□□□ 0.12
MSX2-201ENST00000239243 PRB2P02812 416 aaPredicted RBP15.82■□□□□ 0.12
MSX2-201ENST00000239243 ANK2Q01484 3957 aa15.82■□□□□ 0.12
MSX2-201ENST00000239243 TRAV8-4A0A0B4J246 113 aa15.82■□□□□ 0.12
MSX2-201ENST00000239243 DEFB121Q5J5C9 76 aa15.81■□□□□ 0.12
MSX2-201ENST00000239243 ATXN8Q156A1 80 aa15.8■□□□□ 0.12
MSX2-201ENST00000239243 GAGE12HA6NDE8 117 aa15.8■□□□□ 0.12
MSX2-201ENST00000239243 KIAA0087Q14695 138 aa15.8■□□□□ 0.12
MSX2-201ENST00000239243 ENHOQ6UWT2 76 aa15.8■□□□□ 0.12
MSX2-201ENST00000239243 PFN2P35080 140 aa15.79■□□□□ 0.12
MSX2-201ENST00000239243 WFDC10BQ8IUB3 73 aa15.79■□□□□ 0.12
MSX2-201ENST00000239243 MTURNQ8N3F0 131 aa15.79■□□□□ 0.12
MSX2-201ENST00000239243 SND1-IT1Q9HBX3 110 aa15.78■□□□□ 0.12
MSX2-201ENST00000239243 KLK5Q9Y337 293 aaPredicted RBP15.78■□□□□ 0.12
MSX2-201ENST00000239243 TRAV13-2A0A0B4J235 113 aa15.78■□□□□ 0.12
MSX2-201ENST00000239243 TRAV10A0A0B4J240 114 aa15.78■□□□□ 0.12
MSX2-201ENST00000239243 ESRGQ1W209 222 aa15.77■□□□□ 0.12
MSX2-201ENST00000239243 COX17Q14061 63 aa15.76■□□□□ 0.11
MSX2-201ENST00000239243 C2orf82Q6UX34 121 aa15.76■□□□□ 0.11
MSX2-201ENST00000239243 UBE2WQ96B02 151 aa15.76■□□□□ 0.11
MSX2-201ENST00000239243 NOTCH1P46531 2555 aa15.76■□□□□ 0.11
MSX2-201ENST00000239243 ETDBQ3ZM63 59 aa15.75■□□□□ 0.11
MSX2-201ENST00000239243 MRAPQ8TCY5 172 aa15.75■□□□□ 0.11
MSX2-201ENST00000239243 CCL18P55774 89 aa15.75■□□□□ 0.11
MSX2-201ENST00000239243 C15orf53Q8NAA6 179 aa15.74■□□□□ 0.11
MSX2-201ENST00000239243 TENM3Q9P273 2699 aa15.74■□□□□ 0.11
MSX2-201ENST00000239243 SMCPP49901 116 aaPredicted RBP15.73■□□□□ 0.11
MSX2-201ENST00000239243 SPAG11BQ08648 103 aa15.72■□□□□ 0.11
MSX2-201ENST00000239243 J3QR89 54 aa15.71■□□□□ 0.11
MSX2-201ENST00000239243 M0QXV9 152 aa15.71■□□□□ 0.1
MSX2-201ENST00000239243 RNF151Q2KHN1 245 aa15.71■□□□□ 0.1
MSX2-201ENST00000239243 LINC01620Q4KN68 170 aa15.71■□□□□ 0.1
MSX2-201ENST00000239243 LINC01556Q5JQF7 62 aa15.71■□□□□ 0.1
MSX2-201ENST00000239243 C9JAW5 83 aa15.7■□□□□ 0.1
MSX2-201ENST00000239243 SLC25A20O43772 301 aa15.7■□□□□ 0.1
MSX2-201ENST00000239243 MUC7Q8TAX7 377 aa15.69■□□□□ 0.1
MSX2-201ENST00000239243 MDFIQ99750 246 aa15.68■□□□□ 0.1
MSX2-201ENST00000239243 IGKV2-28A0A075B6P5 120 aa15.68■□□□□ 0.1
MSX2-201ENST00000239243 IGKV2D-28P01615 120 aa15.68■□□□□ 0.1
MSX2-201ENST00000239243 NBEAL1Q6ZS30 2694 aa15.67■□□□□ 0.1
MSX2-201ENST00000239243 LST1O00453 97 aa15.67■□□□□ 0.1
MSX2-201ENST00000239243 LINC00337Q8N6G1 96 aa15.67■□□□□ 0.1
MSX2-201ENST00000239243 TEN1Q86WV5 123 aa15.66■□□□□ 0.1
MSX2-201ENST00000239243 VPS25Q9BRG1 176 aa15.66■□□□□ 0.1
MSX2-201ENST00000239243 CLEC2BQ92478 149 aa15.65■□□□□ 0.1
MSX2-201ENST00000239243 RPL28P46779 137 aaKnown RBP15.64■□□□□ 0.09
MSX2-201ENST00000239243 TRBV10-2A0A0K0K1G8 114 aa15.64■□□□□ 0.09
MSX2-201ENST00000239243 LINC01600Q96MT4 127 aa15.63■□□□□ 0.09
MSX2-201ENST00000239243 CBY1Q9Y3M2 126 aa15.63■□□□□ 0.09
MSX2-201ENST00000239243 DNAH10OSP0CZ25 163 aa15.63■□□□□ 0.09
MSX2-201ENST00000239243 ANKRD29Q8N6D5 301 aa15.63■□□□□ 0.09
MSX2-201ENST00000239243 C1orf43Q9BWL3 253 aa15.62■□□□□ 0.09
MSX2-201ENST00000239243 NDUFC2O95298 119 aa15.62■□□□□ 0.09
MSX2-201ENST00000239243 UNQ6190/PRO20217Q6UXQ8 127 aa15.62■□□□□ 0.09
MSX2-201ENST00000239243 C6orf223Q8N319 242 aa15.62■□□□□ 0.09
MSX2-201ENST00000239243 GVQW2A0A096LPI5 108 aaPredicted RBP15.61■□□□□ 0.09
MSX2-201ENST00000239243 KRTAP26-1Q6PEX3 210 aa15.61■□□□□ 0.09
MSX2-201ENST00000239243 NTN5Q8WTR8 489 aaPredicted RBP15.6■□□□□ 0.09
MSX2-201ENST00000239243 PPDPFLQ8WWR9 84 aa15.6■□□□□ 0.09
MSX2-201ENST00000239243 C9orf116Q5BN46 136 aaPredicted RBP15.59■□□□□ 0.09
MSX2-201ENST00000239243 MGAM2Q2M2H8 2515 aa15.59■□□□□ 0.09
MSX2-201ENST00000239243 H3BT86 120 aa15.59■□□□□ 0.09
MSX2-201ENST00000239243 ZNF561-AS1K7EIQ3 104 aa15.58■□□□□ 0.08
MSX2-201ENST00000239243 C10orf25Q5T742 122 aa15.58■□□□□ 0.08
MSX2-201ENST00000239243 OR13C6PQ8NH95 151 aa15.56■□□□□ 0.08
MSX2-201ENST00000239243 LINC00526Q96FQ7 95 aa15.56■□□□□ 0.08
MSX2-201ENST00000239243 SMIM11BQ8TCY0 68 aa15.56■□□□□ 0.08
MSX2-201ENST00000239243 LINC00588Q9Y4M8 146 aa15.56■□□□□ 0.08
MSX2-201ENST00000239243 TRACP01848 142 aa15.55■□□□□ 0.08
MSX2-201ENST00000239243 HUWE1Q7Z6Z7 4374 aaKnown RBP15.54■□□□□ 0.08
MSX2-201ENST00000239243 IGKV2D-24A0A075B6R9 120 aa15.53■□□□□ 0.08
MSX2-201ENST00000239243 CARD19Q96LW7 228 aa15.53■□□□□ 0.08
MSX2-201ENST00000239243 H0YGX0 51 aa15.52■□□□□ 0.08
MSX2-201ENST00000239243 CAMK2N2Q96S95 79 aa15.52■□□□□ 0.08
MSX2-201ENST00000239243 C2orf48Q96LS8 159 aa15.52■□□□□ 0.07
MSX2-201ENST00000239243 B9D2Q9BPU9 175 aa15.52■□□□□ 0.07
MSX2-201ENST00000239243 C6orf48Q9UBA6 75 aa15.52■□□□□ 0.07
MSX2-201ENST00000239243 F8WDY8 70 aa15.51■□□□□ 0.07
MSX2-201ENST00000239243 HIGD2BQ4VC39 106 aa15.51■□□□□ 0.07
MSX2-201ENST00000239243 C15orf56Q8N910 161 aa15.51■□□□□ 0.07
MSX2-201ENST00000239243 UPK3BQ9BT76 320 aa15.49■□□□□ 0.07
MSX2-201ENST00000239243 TMEM126AQ9H061 195 aa15.49■□□□□ 0.07
MSX2-201ENST00000239243 Q9HAA7 133 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms