RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 AMELXQ99217 191 aa12.29□□□□□ -0.44
SLC1A4-201ENST00000234256 H3BQ85 93 aa12.28□□□□□ -0.44
SLC1A4-201ENST00000234256 Q9UF83 564 aa12.28□□□□□ -0.44
SLC1A4-201ENST00000234256 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.28□□□□□ -0.44
SLC1A4-201ENST00000234256 IGLV1-51P01701 117 aa12.28□□□□□ -0.44
SLC1A4-201ENST00000234256 H0Y9J4 135 aa12.27□□□□□ -0.45
SLC1A4-201ENST00000234256 USP17L23D6RBM5 183 aa12.26□□□□□ -0.45
SLC1A4-201ENST00000234256 IGHV4-30-4P0DP06 118 aa12.26□□□□□ -0.45
SLC1A4-201ENST00000234256 LELP1Q5T871 98 aa12.26□□□□□ -0.45
SLC1A4-201ENST00000234256 COL6A3P12111 3177 aa12.26□□□□□ -0.45
SLC1A4-201ENST00000234256 FAM19A1Q7Z5A9 133 aa12.25□□□□□ -0.45
SLC1A4-201ENST00000234256 CHD6Q8TD26 2715 aa12.25□□□□□ -0.45
SLC1A4-201ENST00000234256 ITPR3Q14573 2671 aa12.24□□□□□ -0.45
SLC1A4-201ENST00000234256 LINC00315P59091 139 aa12.24□□□□□ -0.45
SLC1A4-201ENST00000234256 BRI3O95415 125 aa12.24□□□□□ -0.45
SLC1A4-201ENST00000234256 RETNQ9HD89 108 aa12.23□□□□□ -0.45
SLC1A4-201ENST00000234256 RPL37AP8A6NKH3 93 aa12.23□□□□□ -0.45
SLC1A4-201ENST00000234256 FHL2Q14192 279 aa12.23□□□□□ -0.45
SLC1A4-201ENST00000234256 Q8IZM0 81 aa12.23□□□□□ -0.45
SLC1A4-201ENST00000234256 A0A087WZ39 114 aa12.22□□□□□ -0.45
SLC1A4-201ENST00000234256 C3orf22Q8N5N4 141 aa12.22□□□□□ -0.45
SLC1A4-201ENST00000234256 NANOS2P60321 138 aaKnown RBP12.22□□□□□ -0.45
SLC1A4-201ENST00000234256 KIR2DL5BQ8NHK3 375 aa12.21□□□□□ -0.45
SLC1A4-201ENST00000234256 BEAN1Q3B7T3 259 aa12.21□□□□□ -0.45
SLC1A4-201ENST00000234256 PPDPFQ9H3Y8 114 aa12.21□□□□□ -0.45
SLC1A4-201ENST00000234256 A0A087WVE0 104 aa12.21□□□□□ -0.46
SLC1A4-201ENST00000234256 PCSK5Q92824 1860 aa12.21□□□□□ -0.46
SLC1A4-201ENST00000234256 A0A087WYN8 130 aa12.19□□□□□ -0.46
SLC1A4-201ENST00000234256 SNURFQ9Y675 71 aa12.19□□□□□ -0.46
SLC1A4-201ENST00000234256 ZNF73O43830 326 aaPredicted RBP12.18□□□□□ -0.46
SLC1A4-201ENST00000234256 DSPP15924 2871 aaKnown RBP12.18□□□□□ -0.46
SLC1A4-201ENST00000234256 A8MTW9 85 aa12.17□□□□□ -0.46
SLC1A4-201ENST00000234256 SHISA2Q6UWI4 295 aa12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 KLK5Q9Y337 293 aaPredicted RBP12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 RPL28P46779 137 aaKnown RBP12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 A0A0J9YWU9 116 aa12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 C6orf223Q8N319 242 aa12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 SERP2Q8N6R1 65 aa12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 IMUPQ9GZP8 106 aa12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 CSDC2Q9Y534 153 aaKnown RBP12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 NTM-AS1Q6ZSK4 140 aa12.16□□□□□ -0.46
SLC1A4-201ENST00000234256 TRBV10-3A0A0K0K1G6 114 aa12.15□□□□□ -0.46
SLC1A4-201ENST00000234256 M0R378 163 aa12.15□□□□□ -0.46
SLC1A4-201ENST00000234256 ZNF292O60281 2723 aa12.15□□□□□ -0.46
SLC1A4-201ENST00000234256 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.46
SLC1A4-201ENST00000234256 MPLKIPQ8TAP9 179 aa12.15□□□□□ -0.47
SLC1A4-201ENST00000234256 C11orf72Q8NBR9 251 aa12.14□□□□□ -0.47
SLC1A4-201ENST00000234256 Q6ZTC4 211 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 TRAV10A0A0B4J240 114 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 LINC00337Q8N6G1 96 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 M0R2N4 97 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 PRR4Q16378 134 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 WFDC10BQ8IUB3 73 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 B9D2Q9BPU9 175 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 LRCOL1A6NCL2 159 aa12.13□□□□□ -0.47
SLC1A4-201ENST00000234256 FRYQ5TBA9 3013 aa12.12□□□□□ -0.47
SLC1A4-201ENST00000234256 FAM236DA0A1B0GTK5 79 aa12.12□□□□□ -0.47
SLC1A4-201ENST00000234256 FAM236CP0DP71 79 aa12.12□□□□□ -0.47
SLC1A4-201ENST00000234256 PKIGQ9Y2B9 76 aa12.12□□□□□ -0.47
SLC1A4-201ENST00000234256 COX7CP15954 63 aa12.11□□□□□ -0.47
SLC1A4-201ENST00000234256 Q8N2B8 174 aa12.11□□□□□ -0.47
SLC1A4-201ENST00000234256 COX17Q14061 63 aa12.11□□□□□ -0.47
SLC1A4-201ENST00000234256 WFDC13Q8IUB5 93 aa12.11□□□□□ -0.47
SLC1A4-201ENST00000234256 Q8N814 137 aa12.1□□□□□ -0.47
SLC1A4-201ENST00000234256 FRYLO94915 3013 aa12.1□□□□□ -0.47
SLC1A4-201ENST00000234256 SMCPP49901 116 aaPredicted RBP12.1□□□□□ -0.47
SLC1A4-201ENST00000234256 FAM240AA0A1B0GVK7 77 aa12.1□□□□□ -0.47
SLC1A4-201ENST00000234256 BRK1Q8WUW1 75 aa12.1□□□□□ -0.47
SLC1A4-201ENST00000234256 NBEAQ8NFP9 2946 aa12.09□□□□□ -0.47
SLC1A4-201ENST00000234256 FAM19A4Q96LR4 140 aa12.09□□□□□ -0.47
SLC1A4-201ENST00000234256 IGKV4-1P06312 121 aa12.08□□□□□ -0.48
SLC1A4-201ENST00000234256 C14orf177Q52M58 125 aa12.08□□□□□ -0.48
SLC1A4-201ENST00000234256 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
SLC1A4-201ENST00000234256 CELA1Q9UNI1 258 aa12.07□□□□□ -0.48
SLC1A4-201ENST00000234256 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
SLC1A4-201ENST00000234256 CHKB-CPT1BH3BT56 60 aa12.05□□□□□ -0.48
SLC1A4-201ENST00000234256 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.05□□□□□ -0.48
SLC1A4-201ENST00000234256 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
SLC1A4-201ENST00000234256 Q6JHZ5 121 aa12.04□□□□□ -0.48
SLC1A4-201ENST00000234256 FAM19A3Q7Z5A8 133 aa12.04□□□□□ -0.48
SLC1A4-201ENST00000234256 COL27A1Q8IZC6 1860 aaPredicted RBP12.04□□□□□ -0.48
SLC1A4-201ENST00000234256 EGFEM1PQ0D2K5 195 aa12.04□□□□□ -0.48
SLC1A4-201ENST00000234256 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
SLC1A4-201ENST00000234256 Q6Q795 121 aa12.03□□□□□ -0.48
SLC1A4-201ENST00000234256 SPINK6Q6UWN8 80 aa12.03□□□□□ -0.48
SLC1A4-201ENST00000234256 LINC00846Q9NV44 126 aa12.03□□□□□ -0.48
SLC1A4-201ENST00000234256 IGLV5-39A0A0G2JS06 123 aa12.03□□□□□ -0.48
SLC1A4-201ENST00000234256 A0A1B0GUV1 79 aa12.02□□□□□ -0.49
SLC1A4-201ENST00000234256 HRCT1Q6UXD1 115 aa12.01□□□□□ -0.49
SLC1A4-201ENST00000234256 PRO0461Q9UI25 63 aa12.01□□□□□ -0.49
SLC1A4-201ENST00000234256 SOSTDC1Q6X4U4 206 aa12.01□□□□□ -0.49
SLC1A4-201ENST00000234256 DHRS4-AS1Q9P1J3 65 aa12□□□□□ -0.49
SLC1A4-201ENST00000234256 C16orf95Q9H693 158 aa11.99□□□□□ -0.49
SLC1A4-201ENST00000234256 SETXQ7Z333 2677 aaKnown RBP11.99□□□□□ -0.49
SLC1A4-201ENST00000234256 TEX15Q9BXT5 2789 aa11.99□□□□□ -0.49
SLC1A4-201ENST00000234256 NDUFC2O95298 119 aa11.98□□□□□ -0.49
SLC1A4-201ENST00000234256 LYPD5Q6UWN5 251 aa11.98□□□□□ -0.49
SLC1A4-201ENST00000234256 LOC107984640A0A0U1RRK4 108 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms