RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 IGHV3-30P01768 117 aa10.18□□□□□ -0.78
CCDC47-201ENST00000225726 IGHV3-30-5P0DP03 117 aa10.18□□□□□ -0.78
CCDC47-201ENST00000225726 CLPSL2Q6UWE3 100 aa10.18□□□□□ -0.78
CCDC47-201ENST00000225726 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
CCDC47-201ENST00000225726 NBEAL1Q6ZS30 2694 aa10.18□□□□□ -0.78
CCDC47-201ENST00000225726 IFITM1P13164 125 aa10.17□□□□□ -0.78
CCDC47-201ENST00000225726 SMCPP49901 116 aaPredicted RBP10.17□□□□□ -0.78
CCDC47-201ENST00000225726 REG3AQ06141 175 aa10.17□□□□□ -0.78
CCDC47-201ENST00000225726 TIMM17BO60830 172 aa10.16□□□□□ -0.78
CCDC47-201ENST00000225726 CARD19Q96LW7 228 aa10.16□□□□□ -0.78
CCDC47-201ENST00000225726 LITAFQ99732 161 aa10.16□□□□□ -0.78
CCDC47-201ENST00000225726 XCL1P47992 114 aa10.16□□□□□ -0.78
CCDC47-201ENST00000225726 LINC01561Q8N1V8 128 aa10.16□□□□□ -0.78
CCDC47-201ENST00000225726 Q9H8V8 135 aa10.16□□□□□ -0.78
CCDC47-201ENST00000225726 COX7B2Q8TF08 81 aa10.16□□□□□ -0.78
CCDC47-201ENST00000225726 C5orf38Q86SI9 138 aa10.15□□□□□ -0.78
CCDC47-201ENST00000225726 ZNF625Q96I27 306 aaPredicted RBP10.15□□□□□ -0.78
CCDC47-201ENST00000225726 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.78
CCDC47-201ENST00000225726 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
CCDC47-201ENST00000225726 ANKRD29Q8N6D5 301 aa10.15□□□□□ -0.78
CCDC47-201ENST00000225726 C15orf53Q8NAA6 179 aa10.15□□□□□ -0.79
CCDC47-201ENST00000225726 B9D2Q9BPU9 175 aa10.15□□□□□ -0.79
CCDC47-201ENST00000225726 ESRGQ1W209 222 aa10.14□□□□□ -0.79
CCDC47-201ENST00000225726 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
CCDC47-201ENST00000225726 MGAM2Q2M2H8 2515 aa10.14□□□□□ -0.79
CCDC47-201ENST00000225726 C9JAW5 83 aa10.14□□□□□ -0.79
CCDC47-201ENST00000225726 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
CCDC47-201ENST00000225726 PRR34Q9NV39 138 aa10.13□□□□□ -0.79
CCDC47-201ENST00000225726 HUWE1Q7Z6Z7 4374 aaKnown RBP10.13□□□□□ -0.79
CCDC47-201ENST00000225726 WFDC10BQ8IUB3 73 aa10.13□□□□□ -0.79
CCDC47-201ENST00000225726 CIRBPQ14011 172 aaKnown RBP10.12□□□□□ -0.79
CCDC47-201ENST00000225726 MIAQ16674 131 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 Q1RN00 199 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 KLK12Q9UKR0 248 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 IGHV3-33P01772 117 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 ADAMTSL4-AS1Q5T5F5 129 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 PPDPFLQ8WWR9 84 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 TOMM7Q9P0U1 55 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 PRO0461Q9UI25 63 aa10.12□□□□□ -0.79
CCDC47-201ENST00000225726 COX7A2LO14548 114 aa10.1□□□□□ -0.79
CCDC47-201ENST00000225726 IGLV10-54A0A075B6I4 117 aa10.1□□□□□ -0.79
CCDC47-201ENST00000225726 NTN5Q8WTR8 489 aaPredicted RBP10.1□□□□□ -0.79
CCDC47-201ENST00000225726 ENHOQ6UWT2 76 aa10.1□□□□□ -0.79
CCDC47-201ENST00000225726 CRPP02741 224 aa10.09□□□□□ -0.79
CCDC47-201ENST00000225726 Q8IZM0 81 aa10.09□□□□□ -0.79
CCDC47-201ENST00000225726 PRSS2P07478 247 aa10.08□□□□□ -0.8
CCDC47-201ENST00000225726 TRAV8-4A0A0B4J246 113 aa10.08□□□□□ -0.8
CCDC47-201ENST00000225726 CFC1BP0CG36 223 aa10.08□□□□□ -0.8
CCDC47-201ENST00000225726 CFC1P0CG37 223 aa10.08□□□□□ -0.8
CCDC47-201ENST00000225726 LINC01556Q5JQF7 62 aa10.08□□□□□ -0.8
CCDC47-201ENST00000225726 TCL1BO95988 128 aa10.07□□□□□ -0.8
CCDC47-201ENST00000225726 C9orf153Q5TBE3 101 aa10.07□□□□□ -0.8
CCDC47-201ENST00000225726 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.07□□□□□ -0.8
CCDC47-201ENST00000225726 TEX49A0A1B0GTD5 131 aa10.06□□□□□ -0.8
CCDC47-201ENST00000225726 MALP21145 153 aa10.06□□□□□ -0.8
CCDC47-201ENST00000225726 C6orf226Q5I0X4 101 aa10.06□□□□□ -0.8
CCDC47-201ENST00000225726 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
CCDC47-201ENST00000225726 TEN1Q86WV5 123 aa10.06□□□□□ -0.8
CCDC47-201ENST00000225726 C5orf47Q569G3 176 aa10.06□□□□□ -0.8
CCDC47-201ENST00000225726 A0A0B4J2C4 111 aa10.05□□□□□ -0.8
CCDC47-201ENST00000225726 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
CCDC47-201ENST00000225726 COPS9Q8WXC6 57 aa10.05□□□□□ -0.8
CCDC47-201ENST00000225726 DAND5Q8N907 189 aa10.05□□□□□ -0.8
CCDC47-201ENST00000225726 NPC2P61916 151 aa10.04□□□□□ -0.8
CCDC47-201ENST00000225726 LINC00308Q8TCZ7 52 aa10.04□□□□□ -0.8
CCDC47-201ENST00000225726 DNAH10OSP0CZ25 163 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 LINC00588Q9Y4M8 146 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 A0A0U1RRA0 63 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 IBA57-AS1B1ANH7 110 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 CXCL5P42830 114 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 KIAA0087Q14695 138 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 HRCT1Q6UXD1 115 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 PRO1854Q9UHT4 67 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 DNAH9Q9NYC9 4486 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 EIF4EBP3O60516 100 aaPredicted RBP10.03□□□□□ -0.8
CCDC47-201ENST00000225726 CCL18P55774 89 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 KRTAP21-3Q3LHN1 58 aa10.03□□□□□ -0.8
CCDC47-201ENST00000225726 FAM236AA0A1B0GUQ0 79 aa10.02□□□□□ -0.8
CCDC47-201ENST00000225726 FAM236BA0A1B0GV22 79 aa10.02□□□□□ -0.8
CCDC47-201ENST00000225726 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.8
CCDC47-201ENST00000225726 SLC25A20O43772 301 aa10.02□□□□□ -0.81
CCDC47-201ENST00000225726 LINC00158P58513 81 aa10□□□□□ -0.81
CCDC47-201ENST00000225726 SOSTDC1Q6X4U4 206 aa10□□□□□ -0.81
CCDC47-201ENST00000225726 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
CCDC47-201ENST00000225726 C2orf82Q6UX34 121 aa9.99□□□□□ -0.81
CCDC47-201ENST00000225726 MIR7-3HGQ8N6C7 128 aa9.99□□□□□ -0.81
CCDC47-201ENST00000225726 UPK3BQ9BT76 320 aa9.99□□□□□ -0.81
CCDC47-201ENST00000225726 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
CCDC47-201ENST00000225726 C1orf43Q9BWL3 253 aa9.98□□□□□ -0.81
CCDC47-201ENST00000225726 C4orf26Q17RF5 130 aa9.98□□□□□ -0.81
CCDC47-201ENST00000225726 PFN2P35080 140 aa9.97□□□□□ -0.81
CCDC47-201ENST00000225726 COX17Q14061 63 aa9.95□□□□□ -0.82
CCDC47-201ENST00000225726 LYRM7Q5U5X0 104 aa9.95□□□□□ -0.82
CCDC47-201ENST00000225726 DSCR8Q96T75 97 aa9.95□□□□□ -0.82
CCDC47-201ENST00000225726 APLNQ9ULZ1 77 aa9.94□□□□□ -0.82
CCDC47-201ENST00000225726 COL7A1Q02388 2944 aa9.94□□□□□ -0.82
CCDC47-201ENST00000225726 IGKV2D-24A0A075B6R9 120 aa9.94□□□□□ -0.82
CCDC47-201ENST00000225726 C6orf223Q8N319 242 aa9.94□□□□□ -0.82
CCDC47-201ENST00000225726 hADV29S1A0JD25 119 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms