RNA–Protein interactions for RNA: ENST00000221954.6

CEACAM4-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEACAM4, Length 1,205 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4-201ENST00000221954 ATP5LO75964 103 aa13.11□□□□□ -0.31
CEACAM4-201ENST00000221954 C9orf116Q5BN46 136 aaPredicted RBP13.11□□□□□ -0.31
CEACAM4-201ENST00000221954 Q6ZRP5 223 aa13.11□□□□□ -0.31
CEACAM4-201ENST00000221954 IGLV5-45A0A087WSX0 123 aa13.1□□□□□ -0.31
CEACAM4-201ENST00000221954 GAGE2EQ4V326 116 aa13.1□□□□□ -0.31
CEACAM4-201ENST00000221954 PDZD11Q5EBL8 140 aa13.1□□□□□ -0.31
CEACAM4-201ENST00000221954 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
CEACAM4-201ENST00000221954 GAGE2DQ9UEU5 116 aa13.1□□□□□ -0.31
CEACAM4-201ENST00000221954 DMBT1Q9UGM3 2413 aaPredicted RBP13.1□□□□□ -0.31
CEACAM4-201ENST00000221954 A0A1W2PNN7 141 aa13.09□□□□□ -0.31
CEACAM4-201ENST00000221954 KRTAP29-1A8MX34 341 aaPredicted RBP13.09□□□□□ -0.31
CEACAM4-201ENST00000221954 SMIM1B2RUZ4 78 aa13.09□□□□□ -0.31
CEACAM4-201ENST00000221954 H3BRM9 83 aa13.09□□□□□ -0.31
CEACAM4-201ENST00000221954 NDUFC2-KCTD14E9PQ53 114 aa13.08□□□□□ -0.32
CEACAM4-201ENST00000221954 CXCL5P42830 114 aa13.08□□□□□ -0.32
CEACAM4-201ENST00000221954 HNRNPA3P51991 378 aaKnown RBP13.08□□□□□ -0.32
CEACAM4-201ENST00000221954 PRR3P79522 188 aaKnown RBP13.08□□□□□ -0.32
CEACAM4-201ENST00000221954 F8VRH5 84 aa13.07□□□□□ -0.32
CEACAM4-201ENST00000221954 COX7B2Q8TF08 81 aa13.07□□□□□ -0.32
CEACAM4-201ENST00000221954 MYCBP2O75592 4640 aa13.07□□□□□ -0.32
CEACAM4-201ENST00000221954 SPINK8P0C7L1 97 aa13.06□□□□□ -0.32
CEACAM4-201ENST00000221954 IGLC3P0DOY3 106 aa13.06□□□□□ -0.32
CEACAM4-201ENST00000221954 BAGE3Q86Y29 109 aa13.06□□□□□ -0.32
CEACAM4-201ENST00000221954 OXTP01178 125 aa13.05□□□□□ -0.32
CEACAM4-201ENST00000221954 TRGC2P03986 189 aa13.05□□□□□ -0.32
CEACAM4-201ENST00000221954 HSBP1O75506 76 aa13.03□□□□□ -0.32
CEACAM4-201ENST00000221954 FAM19A5Q7Z5A7 132 aaPredicted RBP13.03□□□□□ -0.32
CEACAM4-201ENST00000221954 FAM168BA1KXE4 195 aa13.01□□□□□ -0.33
CEACAM4-201ENST00000221954 PHF5AQ7RTV0 110 aaKnown RBP13.01□□□□□ -0.33
CEACAM4-201ENST00000221954 IFI27L1Q96BM0 104 aa13□□□□□ -0.33
CEACAM4-201ENST00000221954 ZNF22P17026 224 aaPredicted RBP12.99□□□□□ -0.33
CEACAM4-201ENST00000221954 CHTOPQ9Y3Y2 248 aaKnown RBP12.99□□□□□ -0.33
CEACAM4-201ENST00000221954 COLCA2A8K830 154 aa12.98□□□□□ -0.33
CEACAM4-201ENST00000221954 C9orf129Q5T035 196 aaKnown RBP12.98□□□□□ -0.33
CEACAM4-201ENST00000221954 TMEM170BQ5T4T1 132 aa12.98□□□□□ -0.33
CEACAM4-201ENST00000221954 M0QXV9 152 aa12.97□□□□□ -0.33
CEACAM4-201ENST00000221954 FAM19A2Q8N3H0 131 aa12.97□□□□□ -0.33
CEACAM4-201ENST00000221954 TRAV12-1A0A0B4J245 112 aa12.96□□□□□ -0.33
CEACAM4-201ENST00000221954 C11orf86A6NJI1 115 aa12.96□□□□□ -0.33
CEACAM4-201ENST00000221954 PSORS1C2Q9UIG4 136 aa12.96□□□□□ -0.33
CEACAM4-201ENST00000221954 IGLV5-39A0A0G2JS06 123 aa12.95□□□□□ -0.34
CEACAM4-201ENST00000221954 XAGE1AQ9HD64 81 aa12.95□□□□□ -0.34
CEACAM4-201ENST00000221954 SERF1AO75920 110 aa12.94□□□□□ -0.34
CEACAM4-201ENST00000221954 UBE2BP63146 152 aa12.94□□□□□ -0.34
CEACAM4-201ENST00000221954 SPINK6Q6UWN8 80 aa12.94□□□□□ -0.34
CEACAM4-201ENST00000221954 PKHD1L1Q86WI1 4243 aa12.93□□□□□ -0.34
CEACAM4-201ENST00000221954 C1orf137Q5JT78 98 aa12.92□□□□□ -0.34
CEACAM4-201ENST00000221954 LEPROTL1O95214 131 aa12.91□□□□□ -0.34
CEACAM4-201ENST00000221954 KRTAP7-1Q8IUC3 87 aa12.91□□□□□ -0.34
CEACAM4-201ENST00000221954 SFTA2Q6UW10 78 aa12.9□□□□□ -0.34
CEACAM4-201ENST00000221954 H0Y8G0 127 aa12.89□□□□□ -0.35
CEACAM4-201ENST00000221954 SCO1O75880 301 aa12.89□□□□□ -0.35
CEACAM4-201ENST00000221954 REG3GQ6UW15 175 aa12.89□□□□□ -0.35
CEACAM4-201ENST00000221954 HSPB8Q9UJY1 196 aa12.89□□□□□ -0.35
CEACAM4-201ENST00000221954 LINC00310P59036 64 aa12.88□□□□□ -0.35
CEACAM4-201ENST00000221954 SRSF9Q13242 221 aaKnown RBP eCLIP12.88□□□□□ -0.35
CEACAM4-201ENST00000221954 LBHQ53QV2 105 aaPredicted RBP12.88□□□□□ -0.35
CEACAM4-201ENST00000221954 SERTAD4-AS1Q5TG53 156 aa12.88□□□□□ -0.35
CEACAM4-201ENST00000221954 PFN2P35080 140 aa12.87□□□□□ -0.35
CEACAM4-201ENST00000221954 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
CEACAM4-201ENST00000221954 TMEM223A0PJW6 202 aa12.86□□□□□ -0.35
CEACAM4-201ENST00000221954 ERG28Q9UKR5 140 aa12.86□□□□□ -0.35
CEACAM4-201ENST00000221954 LRP1Q07954 4544 aaKnown RBP12.86□□□□□ -0.35
CEACAM4-201ENST00000221954 FABP4P15090 132 aa12.85□□□□□ -0.35
CEACAM4-201ENST00000221954 KRTAP11-1Q8IUC1 163 aa12.85□□□□□ -0.35
CEACAM4-201ENST00000221954 HERC1Q15751 4861 aa12.84□□□□□ -0.35
CEACAM4-201ENST00000221954 NUPR1O60356 82 aa12.84□□□□□ -0.35
CEACAM4-201ENST00000221954 IGLV7-43P04211 117 aa12.84□□□□□ -0.35
CEACAM4-201ENST00000221954 COX17Q14061 63 aa12.84□□□□□ -0.35
CEACAM4-201ENST00000221954 ODF1Q14990 250 aa12.84□□□□□ -0.35
CEACAM4-201ENST00000221954 ZNF625Q96I27 306 aaPredicted RBP12.84□□□□□ -0.35
CEACAM4-201ENST00000221954 TP73-AS1Q9UF72 201 aa12.84□□□□□ -0.35
CEACAM4-201ENST00000221954 MRPL55Q7Z7F7 128 aaKnown RBP12.83□□□□□ -0.36
CEACAM4-201ENST00000221954 PLA2G2DQ9UNK4 145 aa12.83□□□□□ -0.36
CEACAM4-201ENST00000221954 FAT3Q8TDW7 4589 aa12.81□□□□□ -0.36
CEACAM4-201ENST00000221954 PLNP26678 52 aa12.81□□□□□ -0.36
CEACAM4-201ENST00000221954 NKAPP1Q8N9T2 125 aa12.81□□□□□ -0.36
CEACAM4-201ENST00000221954 DIRC1Q969H9 104 aa12.81□□□□□ -0.36
CEACAM4-201ENST00000221954 LINC01600Q96MT4 127 aa12.81□□□□□ -0.36
CEACAM4-201ENST00000221954 MT1HL1P0DM35 61 aa12.8□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BKO60814 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BJP06899 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BOP23527 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BBP33778 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BDP58876 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BCP62807 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST2H2BEQ16778 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BHQ93079 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BNQ99877 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 HIST1H2BMQ99879 126 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 MAP1LC3CQ9BXW4 147 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 SND1-IT1Q9HBX3 110 aa12.79□□□□□ -0.36
CEACAM4-201ENST00000221954 IGLV5-37A0A075B6J1 123 aa12.77□□□□□ -0.37
CEACAM4-201ENST00000221954 DPM2O94777 84 aa12.77□□□□□ -0.37
CEACAM4-201ENST00000221954 LINC00158P58513 81 aa12.77□□□□□ -0.37
CEACAM4-201ENST00000221954 LINC00167Q96N53 147 aa12.76□□□□□ -0.37
CEACAM4-201ENST00000221954 GAGE10A6NGK3 116 aa12.75□□□□□ -0.37
CEACAM4-201ENST00000221954 ATP6V1G1O75348 118 aa12.75□□□□□ -0.37
CEACAM4-201ENST00000221954 HERV-K104P63124 156 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms