RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 COL5A1P20908 1838 aaPredicted RBP13.5□□□□□ -0.25
SMPD3-201ENST00000219334 FHL3Q13643 280 aa13.5□□□□□ -0.25
SMPD3-201ENST00000219334 ANKRD11Q6UB99 2663 aaPredicted RBP13.5□□□□□ -0.25
SMPD3-201ENST00000219334 C2orf48Q96LS8 159 aa13.49□□□□□ -0.25
SMPD3-201ENST00000219334 A0A1B0GUV1 79 aa13.49□□□□□ -0.25
SMPD3-201ENST00000219334 Q6ZVQ6 151 aa13.48□□□□□ -0.25
SMPD3-201ENST00000219334 Q6JHZ5 121 aa13.48□□□□□ -0.25
SMPD3-201ENST00000219334 C2orf91Q6ZV80 131 aa13.48□□□□□ -0.25
SMPD3-201ENST00000219334 SETD2Q9BYW2 2564 aaPredicted RBP13.48□□□□□ -0.25
SMPD3-201ENST00000219334 NDUFC1O43677 76 aa13.47□□□□□ -0.25
SMPD3-201ENST00000219334 USP9YO00507 2555 aaPredicted RBP13.46□□□□□ -0.25
SMPD3-201ENST00000219334 RAI1Q7Z5J4 1906 aaPredicted RBP13.46□□□□□ -0.25
SMPD3-201ENST00000219334 V9GYY9 64 aa13.45□□□□□ -0.26
SMPD3-201ENST00000219334 ESRGQ1W209 222 aa13.45□□□□□ -0.26
SMPD3-201ENST00000219334 Q8N814 137 aa13.44□□□□□ -0.26
SMPD3-201ENST00000219334 PRR3P79522 188 aaKnown RBP13.44□□□□□ -0.26
SMPD3-201ENST00000219334 IMUPQ9GZP8 106 aa13.44□□□□□ -0.26
SMPD3-201ENST00000219334 SERP2Q8N6R1 65 aa13.43□□□□□ -0.26
SMPD3-201ENST00000219334 Q9BRP9 147 aa13.43□□□□□ -0.26
SMPD3-201ENST00000219334 PRR4Q16378 134 aa13.43□□□□□ -0.26
SMPD3-201ENST00000219334 COX8CQ7Z4L0 72 aa13.43□□□□□ -0.26
SMPD3-201ENST00000219334 SNURFQ9Y675 71 aa13.43□□□□□ -0.26
SMPD3-201ENST00000219334 FASNP49327 2511 aaKnown RBP13.42□□□□□ -0.26
SMPD3-201ENST00000219334 ATP5EP56381 51 aaPredicted RBP13.42□□□□□ -0.26
SMPD3-201ENST00000219334 AMELXQ99217 191 aa13.42□□□□□ -0.26
SMPD3-201ENST00000219334 EXPH5Q8NEV8 1989 aa13.42□□□□□ -0.26
SMPD3-201ENST00000219334 Q6ZSN1 163 aa13.42□□□□□ -0.26
SMPD3-201ENST00000219334 Q8N2B8 174 aa13.42□□□□□ -0.26
SMPD3-201ENST00000219334 FAM30AQ9NZY2 134 aa13.41□□□□□ -0.26
SMPD3-201ENST00000219334 IGHV6-1A0A0B4J1U7 121 aa13.41□□□□□ -0.26
SMPD3-201ENST00000219334 PRYO14603 147 aa13.41□□□□□ -0.26
SMPD3-201ENST00000219334 FAM240AA0A1B0GVK7 77 aa13.39□□□□□ -0.27
SMPD3-201ENST00000219334 MDFIQ99750 246 aa13.38□□□□□ -0.27
SMPD3-201ENST00000219334 LINC01561Q8N1V8 128 aa13.37□□□□□ -0.27
SMPD3-201ENST00000219334 CELA1Q9UNI1 258 aa13.37□□□□□ -0.27
SMPD3-201ENST00000219334 ATG2AQ2TAZ0 1938 aa13.37□□□□□ -0.27
SMPD3-201ENST00000219334 PKD1L2Q7Z442 2459 aa13.37□□□□□ -0.27
SMPD3-201ENST00000219334 Q6ZRU5 148 aa13.36□□□□□ -0.27
SMPD3-201ENST00000219334 PTPRSQ13332 1948 aa13.35□□□□□ -0.27
SMPD3-201ENST00000219334 LIMD2Q9BT23 127 aa13.33□□□□□ -0.27
SMPD3-201ENST00000219334 TSPEAR-AS2P59090 65 aa13.33□□□□□ -0.28
SMPD3-201ENST00000219334 SPTBN4Q9H254 2564 aa13.33□□□□□ -0.28
SMPD3-201ENST00000219334 ADAMTS20P59510 1910 aa13.33□□□□□ -0.28
SMPD3-201ENST00000219334 A0A087WSZ3 146 aa13.33□□□□□ -0.28
SMPD3-201ENST00000219334 URB1-AS1Q96HZ7 61 aa13.33□□□□□ -0.28
SMPD3-201ENST00000219334 LINC00208Q96KT6 92 aa13.32□□□□□ -0.28
SMPD3-201ENST00000219334 A0A087WYN8 130 aa13.32□□□□□ -0.28
SMPD3-201ENST00000219334 ADAMTSL4-AS1Q5T5F5 129 aa13.31□□□□□ -0.28
SMPD3-201ENST00000219334 A6NED7 52 aa13.3□□□□□ -0.28
SMPD3-201ENST00000219334 KRTAP24-1Q3LI83 254 aa13.3□□□□□ -0.28
SMPD3-201ENST00000219334 LINC01547P58512 204 aaPredicted RBP13.29□□□□□ -0.28
SMPD3-201ENST00000219334 PRLHP81277 87 aa13.29□□□□□ -0.28
SMPD3-201ENST00000219334 WDR87Q6ZQQ6 2873 aa13.29□□□□□ -0.28
SMPD3-201ENST00000219334 RETNLBQ9BQ08 111 aa13.29□□□□□ -0.28
SMPD3-201ENST00000219334 C22orf24Q9Y442 160 aa13.28□□□□□ -0.28
SMPD3-201ENST00000219334 X6R8D5 127 aa13.28□□□□□ -0.28
SMPD3-201ENST00000219334 MTORP42345 2549 aa13.28□□□□□ -0.28
SMPD3-201ENST00000219334 C11orf72Q8NBR9 251 aa13.27□□□□□ -0.28
SMPD3-201ENST00000219334 COX7CP15954 63 aa13.27□□□□□ -0.29
SMPD3-201ENST00000219334 LINC00337Q8N6G1 96 aa13.26□□□□□ -0.29
SMPD3-201ENST00000219334 AGRNO00468 2067 aa13.26□□□□□ -0.29
SMPD3-201ENST00000219334 LINC00575Q6W349 94 aa13.26□□□□□ -0.29
SMPD3-201ENST00000219334 SMCR5Q8TEV8 140 aa13.25□□□□□ -0.29
SMPD3-201ENST00000219334 LINC00310P59036 64 aa13.25□□□□□ -0.29
SMPD3-201ENST00000219334 EML5Q05BV3 1969 aa13.23□□□□□ -0.29
SMPD3-201ENST00000219334 SBSPONQ8IVN8 264 aa13.23□□□□□ -0.29
SMPD3-201ENST00000219334 TRBV7-6A0A0J9YX20 115 aa13.23□□□□□ -0.29
SMPD3-201ENST00000219334 TRAV7A0A075B6U4 112 aa13.22□□□□□ -0.29
SMPD3-201ENST00000219334 MUC4Q99102 2169 aa13.22□□□□□ -0.29
SMPD3-201ENST00000219334 TET2Q6N021 2002 aaPredicted RBP13.21□□□□□ -0.29
SMPD3-201ENST00000219334 SRCAPQ6ZRS2 3230 aa13.2□□□□□ -0.3
SMPD3-201ENST00000219334 KIF25-AS1Q9Y6Z4 181 aa13.2□□□□□ -0.3
SMPD3-201ENST00000219334 XGP55808 180 aa13.19□□□□□ -0.3
SMPD3-201ENST00000219334 H3BNG1 76 aa13.19□□□□□ -0.3
SMPD3-201ENST00000219334 POLQO75417 2590 aa13.19□□□□□ -0.3
SMPD3-201ENST00000219334 A8MTW9 85 aa13.19□□□□□ -0.3
SMPD3-201ENST00000219334 DEFB116Q30KQ4 102 aa13.19□□□□□ -0.3
SMPD3-201ENST00000219334 CPAMD8Q8IZJ3 1885 aa13.19□□□□□ -0.3
SMPD3-201ENST00000219334 FAM229AH3BQW9 127 aa13.18□□□□□ -0.3
SMPD3-201ENST00000219334 A0A096LNJ9 63 aa13.18□□□□□ -0.3
SMPD3-201ENST00000219334 Q6Q795 121 aa13.18□□□□□ -0.3
SMPD3-201ENST00000219334 SPINK1P00995 79 aa13.17□□□□□ -0.3
SMPD3-201ENST00000219334 PCOTHQ58A44 107 aa13.17□□□□□ -0.3
SMPD3-201ENST00000219334 Q8N3U1 123 aa13.17□□□□□ -0.3
SMPD3-201ENST00000219334 IGHV3OR16-9A0A0B4J2B5 98 aa13.15□□□□□ -0.3
SMPD3-201ENST00000219334 A0A0U1RQV1 116 aa13.14□□□□□ -0.31
SMPD3-201ENST00000219334 A0A087WVE0 104 aa13.14□□□□□ -0.31
SMPD3-201ENST00000219334 LINC00315P59091 139 aa13.12□□□□□ -0.31
SMPD3-201ENST00000219334 H0Y9P7 68 aa13.12□□□□□ -0.31
SMPD3-201ENST00000219334 SPACA4Q8TDM5 124 aa13.12□□□□□ -0.31
SMPD3-201ENST00000219334 LINC00167Q96N53 147 aa13.12□□□□□ -0.31
SMPD3-201ENST00000219334 HCG22E2RYF7 251 aa13.12□□□□□ -0.31
SMPD3-201ENST00000219334 IGLV5-39A0A0G2JS06 123 aa13.11□□□□□ -0.31
SMPD3-201ENST00000219334 NBDYA0A0U1RRE5 68 aa13.11□□□□□ -0.31
SMPD3-201ENST00000219334 WWC2-AS2Q96NR7 200 aa13.11□□□□□ -0.31
SMPD3-201ENST00000219334 C16orf90A8MZG2 172 aa13.1□□□□□ -0.31
SMPD3-201ENST00000219334 F8P00451 2351 aa13.09□□□□□ -0.31
SMPD3-201ENST00000219334 CCDC179H3BU77 68 aa13.09□□□□□ -0.31
SMPD3-201ENST00000219334 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
SMPD3-201ENST00000219334 MOBPQ13875 183 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms