RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 C6orf223Q8N319 242 aa10.69□□□□□ -0.7
SPTLC2-201ENST00000216484 TRBV10-3A0A0K0K1G6 114 aa10.69□□□□□ -0.7
SPTLC2-201ENST00000216484 FSHBP01225 129 aa10.69□□□□□ -0.7
SPTLC2-201ENST00000216484 ODF3BA8MYP8 253 aa10.68□□□□□ -0.7
SPTLC2-201ENST00000216484 C1orf64Q8NEQ6 169 aa10.68□□□□□ -0.7
SPTLC2-201ENST00000216484 LINC00337Q8N6G1 96 aa10.67□□□□□ -0.7
SPTLC2-201ENST00000216484 SHISA2Q6UWI4 295 aa10.67□□□□□ -0.7
SPTLC2-201ENST00000216484 C2orf48Q96LS8 159 aa10.67□□□□□ -0.7
SPTLC2-201ENST00000216484 UNQ6190/PRO20217Q6UXQ8 127 aa10.66□□□□□ -0.7
SPTLC2-201ENST00000216484 A0A087WSZ3 146 aa10.65□□□□□ -0.7
SPTLC2-201ENST00000216484 Q8N6K4 173 aa10.65□□□□□ -0.7
SPTLC2-201ENST00000216484 MUC7Q8TAX7 377 aa10.64□□□□□ -0.71
SPTLC2-201ENST00000216484 ACYP2P14621 99 aa10.64□□□□□ -0.71
SPTLC2-201ENST00000216484 IGFL2Q6UWQ7 119 aa10.64□□□□□ -0.71
SPTLC2-201ENST00000216484 TMEM254Q8TBM7 123 aa10.64□□□□□ -0.71
SPTLC2-201ENST00000216484 CDC42SE2Q9NRR3 84 aa10.64□□□□□ -0.71
SPTLC2-201ENST00000216484 C8orf87E5RJ46 101 aa10.64□□□□□ -0.71
SPTLC2-201ENST00000216484 COX6A2Q02221 97 aa10.62□□□□□ -0.71
SPTLC2-201ENST00000216484 Q6ZSV7 163 aa10.62□□□□□ -0.71
SPTLC2-201ENST00000216484 SETD2Q9BYW2 2564 aaPredicted RBP10.62□□□□□ -0.71
SPTLC2-201ENST00000216484 PRO0628Q9UI54 55 aa10.62□□□□□ -0.71
SPTLC2-201ENST00000216484 CXCL6P80162 114 aa10.62□□□□□ -0.71
SPTLC2-201ENST00000216484 C10orf99Q6UWK7 81 aa10.61□□□□□ -0.71
SPTLC2-201ENST00000216484 ATP11AUNQ6ZP68 121 aa10.61□□□□□ -0.71
SPTLC2-201ENST00000216484 SSBP3-AS1Q7Z2R9 100 aa10.61□□□□□ -0.71
SPTLC2-201ENST00000216484 Q6ZTC4 211 aa10.61□□□□□ -0.71
SPTLC2-201ENST00000216484 MRGPRG-AS1Q2M3A8 158 aa10.6□□□□□ -0.71
SPTLC2-201ENST00000216484 C18orf65Q6ZTR6 163 aa10.6□□□□□ -0.71
SPTLC2-201ENST00000216484 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
SPTLC2-201ENST00000216484 PKD1L2Q7Z442 2459 aa10.59□□□□□ -0.71
SPTLC2-201ENST00000216484 FSTL3O95633 263 aa10.59□□□□□ -0.71
SPTLC2-201ENST00000216484 BPTFQ12830 3046 aa10.59□□□□□ -0.71
SPTLC2-201ENST00000216484 A8MTW9 85 aa10.58□□□□□ -0.72
SPTLC2-201ENST00000216484 C6orf48Q9UBA6 75 aa10.58□□□□□ -0.72
SPTLC2-201ENST00000216484 ABCA12Q86UK0 2595 aa10.58□□□□□ -0.72
SPTLC2-201ENST00000216484 LMO4P61968 165 aa10.57□□□□□ -0.72
SPTLC2-201ENST00000216484 C11orf1Q9H5F2 150 aa10.57□□□□□ -0.72
SPTLC2-201ENST00000216484 ANKRD17O75179 2603 aaKnown RBP10.56□□□□□ -0.72
SPTLC2-201ENST00000216484 EGFEM1PQ0D2K5 195 aa10.56□□□□□ -0.72
SPTLC2-201ENST00000216484 C4orf26Q17RF5 130 aa10.56□□□□□ -0.72
SPTLC2-201ENST00000216484 COL4A4P53420 1690 aaPredicted RBP10.55□□□□□ -0.72
SPTLC2-201ENST00000216484 LY6G6DO95868 133 aa10.55□□□□□ -0.72
SPTLC2-201ENST00000216484 GAS8-AS1O95177 125 aa10.54□□□□□ -0.72
SPTLC2-201ENST00000216484 PRR9Q5T870 116 aa10.54□□□□□ -0.72
SPTLC2-201ENST00000216484 SMIM29Q86T20 159 aa10.53□□□□□ -0.72
SPTLC2-201ENST00000216484 SPACA4Q8TDM5 124 aa10.53□□□□□ -0.72
SPTLC2-201ENST00000216484 LTBP2Q14767 1821 aa10.52□□□□□ -0.73
SPTLC2-201ENST00000216484 P0C879 139 aa10.52□□□□□ -0.73
SPTLC2-201ENST00000216484 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
SPTLC2-201ENST00000216484 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
SPTLC2-201ENST00000216484 SPTBN4Q9H254 2564 aa10.51□□□□□ -0.73
SPTLC2-201ENST00000216484 KLLNB2CW77 178 aa10.51□□□□□ -0.73
SPTLC2-201ENST00000216484 LINC00242Q5T6M2 205 aa10.51□□□□□ -0.73
SPTLC2-201ENST00000216484 PRORYQ9H606 182 aa10.51□□□□□ -0.73
SPTLC2-201ENST00000216484 JMJD1CQ15652 2540 aa10.51□□□□□ -0.73
SPTLC2-201ENST00000216484 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
SPTLC2-201ENST00000216484 PSMG3-AS1Q96PY0 264 aa10.5□□□□□ -0.73
SPTLC2-201ENST00000216484 IGIPA6NJ69 53 aa10.5□□□□□ -0.73
SPTLC2-201ENST00000216484 FBXL19-AS1Q494R0 122 aa10.49□□□□□ -0.73
SPTLC2-201ENST00000216484 ADAMTSL4-AS1Q5T5F5 129 aa10.49□□□□□ -0.73
SPTLC2-201ENST00000216484 LINC00846Q9NV44 126 aa10.49□□□□□ -0.73
SPTLC2-201ENST00000216484 TP53AIP1Q9HCN2 124 aa10.48□□□□□ -0.73
SPTLC2-201ENST00000216484 LINC00574Q9H8X3 128 aa10.48□□□□□ -0.73
SPTLC2-201ENST00000216484 C1orf229Q6ZS94 237 aaPredicted RBP10.48□□□□□ -0.73
SPTLC2-201ENST00000216484 IGLV4-60A0A075B6I1 120 aa10.47□□□□□ -0.73
SPTLC2-201ENST00000216484 C19orf84I3L1E1 186 aa10.47□□□□□ -0.73
SPTLC2-201ENST00000216484 BRI3O95415 125 aa10.47□□□□□ -0.73
SPTLC2-201ENST00000216484 MOBPQ13875 183 aa10.46□□□□□ -0.73
SPTLC2-201ENST00000216484 MDFIQ99750 246 aa10.46□□□□□ -0.73
SPTLC2-201ENST00000216484 C1orf134Q5TEV5 83 aa10.45□□□□□ -0.74
SPTLC2-201ENST00000216484 Q8NA96 180 aa10.45□□□□□ -0.74
SPTLC2-201ENST00000216484 LINC01006Q8NI28 216 aa10.45□□□□□ -0.74
SPTLC2-201ENST00000216484 C11orf21Q9P2W6 132 aa10.45□□□□□ -0.74
SPTLC2-201ENST00000216484 BRWD1-AS2P59051 145 aa10.44□□□□□ -0.74
SPTLC2-201ENST00000216484 LINC00313P59037 77 aa10.43□□□□□ -0.74
SPTLC2-201ENST00000216484 TSPEAR-AS2P59090 65 aa10.43□□□□□ -0.74
SPTLC2-201ENST00000216484 ZNF295-AS1Q8N0V1 137 aa10.42□□□□□ -0.74
SPTLC2-201ENST00000216484 CRIPTQ9P021 101 aa10.42□□□□□ -0.74
SPTLC2-201ENST00000216484 USP9XQ93008 2570 aaPredicted RBP10.42□□□□□ -0.74
SPTLC2-201ENST00000216484 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
SPTLC2-201ENST00000216484 EIF4EBP1Q13541 118 aaPredicted RBP10.41□□□□□ -0.74
SPTLC2-201ENST00000216484 KIAA0087Q14695 138 aa10.41□□□□□ -0.74
SPTLC2-201ENST00000216484 CHCHD7Q9BUK0 85 aa10.4□□□□□ -0.74
SPTLC2-201ENST00000216484 ZNF580Q9UK33 172 aa10.4□□□□□ -0.74
SPTLC2-201ENST00000216484 WISP2O76076 250 aa10.4□□□□□ -0.74
SPTLC2-201ENST00000216484 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.75
SPTLC2-201ENST00000216484 CNFNQ9BYD5 112 aa10.4□□□□□ -0.75
SPTLC2-201ENST00000216484 APLNQ9ULZ1 77 aa10.4□□□□□ -0.75
SPTLC2-201ENST00000216484 F8WDY8 70 aa10.38□□□□□ -0.75
SPTLC2-201ENST00000216484 FHL2Q14192 279 aa10.36□□□□□ -0.75
SPTLC2-201ENST00000216484 Q6ZPA2 131 aa10.36□□□□□ -0.75
SPTLC2-201ENST00000216484 TRAV22A0A0B4J277 110 aa10.36□□□□□ -0.75
SPTLC2-201ENST00000216484 EDN2P20800 178 aa10.36□□□□□ -0.75
SPTLC2-201ENST00000216484 C22orf24Q9Y442 160 aa10.36□□□□□ -0.75
SPTLC2-201ENST00000216484 Q8N2B8 174 aa10.35□□□□□ -0.75
SPTLC2-201ENST00000216484 POLQO75417 2590 aa10.35□□□□□ -0.75
SPTLC2-201ENST00000216484 Q6ZRU5 148 aa10.35□□□□□ -0.75
SPTLC2-201ENST00000216484 COL4A3Q01955 1670 aa10.34□□□□□ -0.75
SPTLC2-201ENST00000216484 CENPFP49454 3210 aa10.34□□□□□ -0.75
SPTLC2-201ENST00000216484 PRRC2CQ9Y520 2896 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms