RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PRSS3P2Q8NHM4 247 aa4.86□□□□□ -1.63
PHGDH-225ENST00000641720 TMEM101Q96IK0 257 aa4.86□□□□□ -1.63
PHGDH-225ENST00000641720 TIMM21Q9BVV7 248 aa4.86□□□□□ -1.63
PHGDH-225ENST00000641720 A0A096LNJ9 63 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 IGKV3OR2-268A0A0C4DH90 116 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 K7EMI3 77 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 LINC00310P59036 64 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 Q0VG73 95 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 PMCHL1Q16048 86 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 MIAQ16674 131 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 FA2HQ7L5A8 372 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 ZNF664Q8N3J9 261 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 SPANXA1Q9NS26 97 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 CYSLTR1Q9Y271 337 aa4.85□□□□□ -1.63
PHGDH-225ENST00000641720 CSDC2Q9Y534 153 aaKnown RBP4.85□□□□□ -1.63
PHGDH-225ENST00000641720 IGLV4-3A0A075B6K6 122 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 IGIPA6NJ69 53 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 USP17L23D6RBM5 183 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 LECT2O14960 151 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 PTTG1IPP53801 180 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 MRPS36P82909 103 aaKnown RBP4.84□□□□□ -1.63
PHGDH-225ENST00000641720 ZC2HC1BQ5TFG8 222 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 TMEM18Q96B42 140 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 TOMM6Q96B49 74 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 RMI2Q96E14 147 aa4.84□□□□□ -1.63
PHGDH-225ENST00000641720 TRAV13-1A0A0B4J241 112 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 LINC00959A0A1B0GUT2 108 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 GAGE12HA6NDE8 117 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 PSCAO43653 123 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 OXTP01178 125 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 LINC00614P0C842 121 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 HNRNPA3P51991 378 aaKnown RBP4.83□□□□□ -1.64
PHGDH-225ENST00000641720 BAALCQ8WXS3 180 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 CHCHD10Q8WYQ3 142 aaPredicted RBP4.83□□□□□ -1.64
PHGDH-225ENST00000641720 TM2D2Q9BX73 214 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 PYGO1Q9Y3Y4 419 aa4.83□□□□□ -1.64
PHGDH-225ENST00000641720 TRAV8-4A0A0B4J246 113 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 IFITM10A6NMD0 228 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 CCL25O15444 150 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BKO60814 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 SERF1AO75920 110 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HBDP02042 147 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BJP06899 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BOP23527 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BBP33778 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 XCL1P47992 114 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BDP58876 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BCP62807 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 SMAGPQ0VAQ4 97 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 FOXI1Q12951 378 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST2H2BEQ16778 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.82□□□□□ -1.64
PHGDH-225ENST00000641720 BAGE3Q86Y29 109 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BHQ93079 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 TMEM141Q96I45 108 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BNQ99877 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 HIST1H2BMQ99879 126 aa4.82□□□□□ -1.64
PHGDH-225ENST00000641720 NUPR1O60356 82 aa4.81□□□□□ -1.64
PHGDH-225ENST00000641720 PLA2G1BP04054 148 aaKnown RBP4.81□□□□□ -1.64
PHGDH-225ENST00000641720 PDZD11Q5EBL8 140 aa4.81□□□□□ -1.64
PHGDH-225ENST00000641720 NTN5Q8WTR8 489 aaPredicted RBP4.81□□□□□ -1.64
PHGDH-225ENST00000641720 CHCHD1Q96BP2 118 aaKnown RBP4.81□□□□□ -1.64
PHGDH-225ENST00000641720 SCGB3A1Q96QR1 104 aa4.81□□□□□ -1.64
PHGDH-225ENST00000641720 AMELXQ99217 191 aa4.81□□□□□ -1.64
PHGDH-225ENST00000641720 TIMM17AQ99595 171 aa4.81□□□□□ -1.64
PHGDH-225ENST00000641720 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
PHGDH-225ENST00000641720 IGLV5-52A0A0A0MRZ9 124 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 UBE2D1P51668 147 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 RAB5BP61020 215 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 SS18Q15532 418 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 LBHQ53QV2 105 aaPredicted RBP4.8□□□□□ -1.64
PHGDH-225ENST00000641720 TEX43Q6ZNM6 134 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 ERASQ7Z444 233 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 FAM19A2Q8N3H0 131 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 Q8N814 137 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 C15orf56Q8N910 161 aa4.8□□□□□ -1.64
PHGDH-225ENST00000641720 GEMIN7Q9H840 131 aaKnown RBP4.8□□□□□ -1.64
PHGDH-225ENST00000641720 A0A0U1RRA0 63 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 C1orf196B1AJZ1 125 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 HSBP1O75506 76 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 NPSP0C0P6 89 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 G0S2P27469 103 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 LINC00242Q5T6M2 205 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 CD164L2Q6UWJ8 174 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 Q6ZN92 141 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 SCXQ7RTU7 201 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 FAT4Q6V0I7 4981 aa4.79□□□□□ -1.64
PHGDH-225ENST00000641720 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.78□□□□□ -1.64
PHGDH-225ENST00000641720 A0A0J9YXV3 536 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 PCP4L1A6NKN8 68 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 COX7A2LO14548 114 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 PRSS1P07477 247 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 COX6A2Q02221 97 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 HIGD2BQ4VC39 106 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 C5orf38Q86SI9 138 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 C2orf88Q9BSF0 95 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 CST9LQ9H4G1 147 aa4.78□□□□□ -1.64
PHGDH-225ENST00000641720 GVQW2A0A096LPI5 108 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms