RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 RMI2Q96E14 147 aa12.1□□□□□ -0.47
SCARB2-210ENST00000638567 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
SCARB2-210ENST00000638567 LINC00482Q8N8I6 264 aa12.1□□□□□ -0.47
SCARB2-210ENST00000638567 TRAV23DV6A0A075B6W5 121 aa12.09□□□□□ -0.47
SCARB2-210ENST00000638567 MRAPQ8TCY5 172 aa12.09□□□□□ -0.47
SCARB2-210ENST00000638567 UBE2BP63146 152 aa12.09□□□□□ -0.47
SCARB2-210ENST00000638567 ADAMTSL4-AS1Q5T5F5 129 aa12.09□□□□□ -0.47
SCARB2-210ENST00000638567 FUSP35637 526 aaKnown RBP eCLIP12.08□□□□□ -0.47
SCARB2-210ENST00000638567 HIGD2BQ4VC39 106 aa12.08□□□□□ -0.47
SCARB2-210ENST00000638567 CDC42SE2Q9NRR3 84 aa12.08□□□□□ -0.47
SCARB2-210ENST00000638567 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.47
SCARB2-210ENST00000638567 NREPQ16612 68 aa12.08□□□□□ -0.48
SCARB2-210ENST00000638567 BRI3O95415 125 aa12.08□□□□□ -0.48
SCARB2-210ENST00000638567 LINC01006Q8NI28 216 aa12.08□□□□□ -0.48
SCARB2-210ENST00000638567 CHCHD7Q9BUK0 85 aa12.08□□□□□ -0.48
SCARB2-210ENST00000638567 BBC3Q96PG8 261 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-210ENST00000638567 J3KT08 172 aa12.06□□□□□ -0.48
SCARB2-210ENST00000638567 UQCRQO14949 82 aa12.06□□□□□ -0.48
SCARB2-210ENST00000638567 C6orf99Q4VX62 202 aa12.06□□□□□ -0.48
SCARB2-210ENST00000638567 CDK2AP2O75956 126 aa12.06□□□□□ -0.48
SCARB2-210ENST00000638567 AMELXQ99217 191 aa12.06□□□□□ -0.48
SCARB2-210ENST00000638567 XAGE1AQ9HD64 81 aa12.05□□□□□ -0.48
SCARB2-210ENST00000638567 ANKRD17O75179 2603 aaKnown RBP12.05□□□□□ -0.48
SCARB2-210ENST00000638567 SMIM1B2RUZ4 78 aa12.05□□□□□ -0.48
SCARB2-210ENST00000638567 LINC00694P0DN24 101 aa12.05□□□□□ -0.48
SCARB2-210ENST00000638567 SMIM11BQ8TCY0 68 aa12.05□□□□□ -0.48
SCARB2-210ENST00000638567 SMIM9A6NGZ8 99 aa12.05□□□□□ -0.48
SCARB2-210ENST00000638567 LINC01546A6NGU7 62 aa12.04□□□□□ -0.48
SCARB2-210ENST00000638567 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
SCARB2-210ENST00000638567 COX6A2Q02221 97 aa12.04□□□□□ -0.48
SCARB2-210ENST00000638567 Q6ZSN1 163 aa12.04□□□□□ -0.48
SCARB2-210ENST00000638567 CCDC179H3BU77 68 aa12.04□□□□□ -0.48
SCARB2-210ENST00000638567 COX7BP24311 80 aa12.04□□□□□ -0.48
SCARB2-210ENST00000638567 CENPEQ02224 2701 aa12.04□□□□□ -0.48
SCARB2-210ENST00000638567 LINC00959A0A1B0GUT2 108 aa12.03□□□□□ -0.48
SCARB2-210ENST00000638567 LINC00526Q96FQ7 95 aa12.03□□□□□ -0.48
SCARB2-210ENST00000638567 CCL18P55774 89 aa12.03□□□□□ -0.48
SCARB2-210ENST00000638567 KRTAP10-9P60411 292 aa12.02□□□□□ -0.48
SCARB2-210ENST00000638567 LINC00315P59091 139 aa12.02□□□□□ -0.49
SCARB2-210ENST00000638567 H3BQ85 93 aa12.02□□□□□ -0.49
SCARB2-210ENST00000638567 UPK3BQ9BT76 320 aa12.02□□□□□ -0.49
SCARB2-210ENST00000638567 C20orf197Q8N268 126 aa12.01□□□□□ -0.49
SCARB2-210ENST00000638567 C1orf158Q8N1D5 194 aa12.01□□□□□ -0.49
SCARB2-210ENST00000638567 PDE6GP18545 87 aa12.01□□□□□ -0.49
SCARB2-210ENST00000638567 VPS13AQ96RL7 3174 aa12□□□□□ -0.49
SCARB2-210ENST00000638567 ZNF843Q8N446 348 aa12□□□□□ -0.49
SCARB2-210ENST00000638567 MGAQ8IWI9 3026 aa11.99□□□□□ -0.49
SCARB2-210ENST00000638567 ENHOQ6UWT2 76 aa11.99□□□□□ -0.49
SCARB2-210ENST00000638567 C3orf22Q8N5N4 141 aa11.99□□□□□ -0.49
SCARB2-210ENST00000638567 IMUPQ9GZP8 106 aa11.99□□□□□ -0.49
SCARB2-210ENST00000638567 CLUHP3Q96NS8 147 aa11.98□□□□□ -0.49
SCARB2-210ENST00000638567 CD164L2Q6UWJ8 174 aa11.98□□□□□ -0.49
SCARB2-210ENST00000638567 SCXQ7RTU7 201 aa11.96□□□□□ -0.49
SCARB2-210ENST00000638567 FLNBO75369 2602 aaKnown RBP11.96□□□□□ -0.49
SCARB2-210ENST00000638567 FAM240AA0A1B0GVK7 77 aa11.96□□□□□ -0.5
SCARB2-210ENST00000638567 IGLV4-60A0A075B6I1 120 aa11.95□□□□□ -0.5
SCARB2-210ENST00000638567 TMEM258P61165 79 aa11.95□□□□□ -0.5
SCARB2-210ENST00000638567 BEAN1Q3B7T3 259 aa11.95□□□□□ -0.5
SCARB2-210ENST00000638567 Q6ZQY7 126 aa11.95□□□□□ -0.5
SCARB2-210ENST00000638567 CDIP1Q9H305 208 aa11.94□□□□□ -0.5
SCARB2-210ENST00000638567 USP17L23D6RBM5 183 aa11.94□□□□□ -0.5
SCARB2-210ENST00000638567 SMCPP49901 116 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-210ENST00000638567 FAM19A4Q96LR4 140 aa11.94□□□□□ -0.5
SCARB2-210ENST00000638567 Q6Q795 121 aa11.93□□□□□ -0.5
SCARB2-210ENST00000638567 INAFM1C9JVW0 142 aa11.93□□□□□ -0.5
SCARB2-210ENST00000638567 MIFP14174 115 aa11.92□□□□□ -0.5
SCARB2-210ENST00000638567 ATP5EP2Q5VTU8 51 aa11.92□□□□□ -0.5
SCARB2-210ENST00000638567 CSDC2Q9Y534 153 aaKnown RBP11.92□□□□□ -0.5
SCARB2-210ENST00000638567 FAM110AQ9BQ89 295 aa11.91□□□□□ -0.5
SCARB2-210ENST00000638567 PRO0461Q9UI25 63 aa11.91□□□□□ -0.5
SCARB2-210ENST00000638567 SZT2Q5T011 3432 aa11.91□□□□□ -0.5
SCARB2-210ENST00000638567 RPL28P46779 137 aaKnown RBP11.91□□□□□ -0.5
SCARB2-210ENST00000638567 Q8IZM0 81 aa11.91□□□□□ -0.5
SCARB2-210ENST00000638567 MUC4Q99102 2169 aa11.91□□□□□ -0.5
SCARB2-210ENST00000638567 PRB2P02812 416 aaPredicted RBP11.91□□□□□ -0.5
SCARB2-210ENST00000638567 BPY2O14599 106 aa11.9□□□□□ -0.5
SCARB2-210ENST00000638567 A0A087WZ39 114 aa11.9□□□□□ -0.5
SCARB2-210ENST00000638567 Q9UF83 564 aa11.89□□□□□ -0.51
SCARB2-210ENST00000638567 SERP2Q8N6R1 65 aa11.89□□□□□ -0.51
SCARB2-210ENST00000638567 HILS1P60008 231 aa11.89□□□□□ -0.51
SCARB2-210ENST00000638567 PRR3P79522 188 aaKnown RBP11.89□□□□□ -0.51
SCARB2-210ENST00000638567 C11orf45Q8TAV5 145 aa11.89□□□□□ -0.51
SCARB2-210ENST00000638567 IGLV1-51P01701 117 aa11.88□□□□□ -0.51
SCARB2-210ENST00000638567 COX7CP15954 63 aa11.88□□□□□ -0.51
SCARB2-210ENST00000638567 C9orf116Q5BN46 136 aaPredicted RBP11.88□□□□□ -0.51
SCARB2-210ENST00000638567 A0A087WYN8 130 aa11.87□□□□□ -0.51
SCARB2-210ENST00000638567 LAMA1P25391 3075 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 FHL2Q14192 279 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 WFDC9Q8NEX5 89 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 COL27A1Q8IZC6 1860 aaPredicted RBP11.86□□□□□ -0.51
SCARB2-210ENST00000638567 DEFB131BA0A096LNP1 70 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 PLA2G2AP14555 144 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 IGKV2-24A0A0C4DH68 120 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 C11orf72Q8NBR9 251 aa11.86□□□□□ -0.51
SCARB2-210ENST00000638567 LELP1Q5T871 98 aa11.85□□□□□ -0.51
SCARB2-210ENST00000638567 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
SCARB2-210ENST00000638567 CCKP06307 115 aa11.85□□□□□ -0.51
SCARB2-210ENST00000638567 A0A087WVE0 104 aa11.84□□□□□ -0.51
SCARB2-210ENST00000638567 SYCNQ0VAF6 134 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms