RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 Q6YL49 198 aa12.18□□□□□ -0.46
CACNA1A-258ENST00000638029 CDKN2A-AS1Q9UH64 79 aa12.17□□□□□ -0.46
CACNA1A-258ENST00000638029 DEFB114Q30KQ6 69 aa12.17□□□□□ -0.46
CACNA1A-258ENST00000638029 PRORYQ9H606 182 aa12.17□□□□□ -0.46
CACNA1A-258ENST00000638029 NOTCH2Q04721 2471 aa12.17□□□□□ -0.46
CACNA1A-258ENST00000638029 WDR87Q6ZQQ6 2873 aa12.17□□□□□ -0.46
CACNA1A-258ENST00000638029 GDF5OSQ5U4N7 250 aa12.17□□□□□ -0.46
CACNA1A-258ENST00000638029 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
CACNA1A-258ENST00000638029 SMIM9A6NGZ8 99 aa12.16□□□□□ -0.46
CACNA1A-258ENST00000638029 CRYGAP11844 174 aa12.16□□□□□ -0.46
CACNA1A-258ENST00000638029 ANKHD1Q8IWZ3 2542 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-258ENST00000638029 EBI3Q14213 229 aa12.16□□□□□ -0.46
CACNA1A-258ENST00000638029 LINC00474Q9P2X8 69 aa12.16□□□□□ -0.46
CACNA1A-258ENST00000638029 MYO18BQ8IUG5 2567 aa12.16□□□□□ -0.46
CACNA1A-258ENST00000638029 COX7CP15954 63 aa12.15□□□□□ -0.46
CACNA1A-258ENST00000638029 ACACBO00763 2458 aa12.15□□□□□ -0.46
CACNA1A-258ENST00000638029 ATP5EP2Q5VTU8 51 aa12.15□□□□□ -0.46
CACNA1A-258ENST00000638029 CSDC2Q9Y534 153 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-258ENST00000638029 NEXN-AS1Q8NBZ9 246 aa12.15□□□□□ -0.47
CACNA1A-258ENST00000638029 VPREB1P12018 145 aa12.14□□□□□ -0.47
CACNA1A-258ENST00000638029 LINC00208Q96KT6 92 aa12.14□□□□□ -0.47
CACNA1A-258ENST00000638029 ZFYVE26Q68DK2 2539 aa12.14□□□□□ -0.47
CACNA1A-258ENST00000638029 RPL28P46779 137 aaKnown RBP12.13□□□□□ -0.47
CACNA1A-258ENST00000638029 Q6ZSR3 168 aa12.13□□□□□ -0.47
CACNA1A-258ENST00000638029 Q6ZQY7 126 aa12.13□□□□□ -0.47
CACNA1A-258ENST00000638029 IGLV4-69A0A075B6H9 119 aa12.12□□□□□ -0.47
CACNA1A-258ENST00000638029 IGLV1-47P01700 117 aa12.12□□□□□ -0.47
CACNA1A-258ENST00000638029 C20orf203Q8NBC4 194 aa12.12□□□□□ -0.47
CACNA1A-258ENST00000638029 LRRC75A-AS1Q8N1F1 130 aa12.12□□□□□ -0.47
CACNA1A-258ENST00000638029 Q9UF83 564 aa12.12□□□□□ -0.47
CACNA1A-258ENST00000638029 SMIM26A0A096LP01 95 aa12.11□□□□□ -0.47
CACNA1A-258ENST00000638029 C7orf65Q6ZTY9 151 aa12.11□□□□□ -0.47
CACNA1A-258ENST00000638029 IGKV2D-30A0A075B6S6 120 aa12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 IGKV2-30P06310 120 aa12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 LINC01547P58512 204 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 H7C423 109 aa12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 C1orf134Q5TEV5 83 aa12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 TNFRSF13BO14836 293 aaPredicted RBP12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 ACANP16112 2415 aa12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 Q6ZSV7 163 aa12.1□□□□□ -0.47
CACNA1A-258ENST00000638029 ZNF73O43830 326 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-258ENST00000638029 IGLV8-61A0A075B6I0 122 aa12.09□□□□□ -0.47
CACNA1A-258ENST00000638029 CFAP126Q5VTH2 177 aa12.09□□□□□ -0.47
CACNA1A-258ENST00000638029 U3KQK5 164 aa12.08□□□□□ -0.48
CACNA1A-258ENST00000638029 ZNF80P51504 273 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-258ENST00000638029 MAPKAPK5-AS1Q8N8E1 139 aa12.08□□□□□ -0.48
CACNA1A-258ENST00000638029 SMIM11BQ8TCY0 68 aa12.08□□□□□ -0.48
CACNA1A-258ENST00000638029 LINC00308Q8TCZ7 52 aa12.08□□□□□ -0.48
CACNA1A-258ENST00000638029 DHRS4-AS1Q9P1J3 65 aa12.08□□□□□ -0.48
CACNA1A-258ENST00000638029 SPINT4Q6UDR6 99 aa12.07□□□□□ -0.48
CACNA1A-258ENST00000638029 C6orf223Q8N319 242 aa12.07□□□□□ -0.48
CACNA1A-258ENST00000638029 CCDC140Q96MF4 163 aa12.07□□□□□ -0.48
CACNA1A-258ENST00000638029 J3QL48 77 aa12.07□□□□□ -0.48
CACNA1A-258ENST00000638029 C9orf116Q5BN46 136 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-258ENST00000638029 C19orf71A6NCJ1 209 aa12.06□□□□□ -0.48
CACNA1A-258ENST00000638029 REG3GQ6UW15 175 aa12.06□□□□□ -0.48
CACNA1A-258ENST00000638029 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
CACNA1A-258ENST00000638029 FBXL19-AS1Q494R0 122 aa12.06□□□□□ -0.48
CACNA1A-258ENST00000638029 Q8NA96 180 aa12.06□□□□□ -0.48
CACNA1A-258ENST00000638029 C2orf48Q96LS8 159 aa12.05□□□□□ -0.48
CACNA1A-258ENST00000638029 M0R378 163 aa12.05□□□□□ -0.48
CACNA1A-258ENST00000638029 LST1O00453 97 aa12.05□□□□□ -0.48
CACNA1A-258ENST00000638029 IGLV4-3A0A075B6K6 122 aa12.04□□□□□ -0.48
CACNA1A-258ENST00000638029 PRR3P79522 188 aaKnown RBP12.03□□□□□ -0.48
CACNA1A-258ENST00000638029 SPACA4Q8TDM5 124 aa12.03□□□□□ -0.48
CACNA1A-258ENST00000638029 CACNA1AO00555 2505 aa12.03□□□□□ -0.48
CACNA1A-258ENST00000638029 IMUPQ9GZP8 106 aa12.03□□□□□ -0.48
CACNA1A-258ENST00000638029 PYGO1Q9Y3Y4 419 aa12.03□□□□□ -0.48
CACNA1A-258ENST00000638029 TRBV30A0A0K0K1B3 111 aa12.02□□□□□ -0.48
CACNA1A-258ENST00000638029 WISP2O76076 250 aa12.02□□□□□ -0.48
CACNA1A-258ENST00000638029 MSMPQ1L6U9 139 aa12.02□□□□□ -0.48
CACNA1A-258ENST00000638029 SPRY4Q9C004 299 aa12.02□□□□□ -0.48
CACNA1A-258ENST00000638029 IBA57-AS1B1ANH7 110 aa12.02□□□□□ -0.49
CACNA1A-258ENST00000638029 RBX1P62877 108 aa12.01□□□□□ -0.49
CACNA1A-258ENST00000638029 A0A1B0GXF2 115 aa12.01□□□□□ -0.49
CACNA1A-258ENST00000638029 LELP1Q5T871 98 aa12.01□□□□□ -0.49
CACNA1A-258ENST00000638029 A0A1W2PNU3 283 aaPredicted RBP12□□□□□ -0.49
CACNA1A-258ENST00000638029 LMO4P61968 165 aa12□□□□□ -0.49
CACNA1A-258ENST00000638029 H0Y9P7 68 aa11.99□□□□□ -0.49
CACNA1A-258ENST00000638029 K7EQG2 157 aa11.99□□□□□ -0.49
CACNA1A-258ENST00000638029 COL4A3Q01955 1670 aa11.98□□□□□ -0.49
CACNA1A-258ENST00000638029 TRAV7A0A075B6U4 112 aa11.98□□□□□ -0.49
CACNA1A-258ENST00000638029 LINC01006Q8NI28 216 aa11.98□□□□□ -0.49
CACNA1A-258ENST00000638029 RNASE3P12724 160 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-258ENST00000638029 ODF3BA8MYP8 253 aa11.97□□□□□ -0.49
CACNA1A-258ENST00000638029 MRPS36P82909 103 aaKnown RBP11.97□□□□□ -0.49
CACNA1A-258ENST00000638029 SPAG11AQ6PDA7 123 aa11.97□□□□□ -0.49
CACNA1A-258ENST00000638029 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
CACNA1A-258ENST00000638029 F8P00451 2351 aa11.96□□□□□ -0.5
CACNA1A-258ENST00000638029 Q9BRP9 147 aa11.96□□□□□ -0.5
CACNA1A-258ENST00000638029 FAM229AH3BQW9 127 aa11.96□□□□□ -0.5
CACNA1A-258ENST00000638029 ZNF22P17026 224 aaPredicted RBP11.95□□□□□ -0.5
CACNA1A-258ENST00000638029 COX6A2Q02221 97 aa11.95□□□□□ -0.5
CACNA1A-258ENST00000638029 LINC00959A0A1B0GUT2 108 aa11.94□□□□□ -0.5
CACNA1A-258ENST00000638029 COX6B2Q6YFQ2 88 aa11.94□□□□□ -0.5
CACNA1A-258ENST00000638029 PIEZO2Q9H5I5 2752 aa11.94□□□□□ -0.5
CACNA1A-258ENST00000638029 HCG22E2RYF7 251 aa11.93□□□□□ -0.5
CACNA1A-258ENST00000638029 CYSRT1A8MQ03 144 aa11.93□□□□□ -0.5
CACNA1A-258ENST00000638029 Q6ZS46 218 aa11.93□□□□□ -0.5
CACNA1A-258ENST00000638029 TRBV6-4A0A1B0GX49 114 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms