RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 VCX2Q9H322 139 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 LYSTQ99698 3801 aa4.51□□□□□ -1.69
UPF3B-205ENST00000636792 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
UPF3B-205ENST00000636792 LINC00959A0A1B0GUT2 108 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 HERVK_113P63121 156 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 PMVKQ15126 192 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 C14orf177Q52M58 125 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 IFI27L1Q96BM0 104 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 KRTAP1-5Q9BYS1 174 aa4.5□□□□□ -1.69
UPF3B-205ENST00000636792 UBE2D1P51668 147 aa4.49□□□□□ -1.69
UPF3B-205ENST00000636792 NDUFA6P56556 154 aa4.49□□□□□ -1.69
UPF3B-205ENST00000636792 CD164L2Q6UWJ8 174 aa4.49□□□□□ -1.69
UPF3B-205ENST00000636792 Q6ZRN7 208 aaPredicted RBP4.49□□□□□ -1.69
UPF3B-205ENST00000636792 LINC00173Q6ZV60 143 aa4.49□□□□□ -1.69
UPF3B-205ENST00000636792 SPATA12Q7Z6I5 190 aa4.49□□□□□ -1.69
UPF3B-205ENST00000636792 BAALCQ8WXS3 180 aa4.49□□□□□ -1.69
UPF3B-205ENST00000636792 FAM104AQ969W3 186 aa4.49□□□□□ -1.69
UPF3B-205ENST00000636792 IGKV2D-24A0A075B6R9 120 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 IGLV5-45A0A087WSX0 123 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 TINCRA0A1B0GVN0 87 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 F8WDY8 70 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 PSCAO43653 123 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 S100A2P29034 98 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 CFAP161Q6P656 301 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 DEFB104AQ8WTQ1 72 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 MAP1LC3CQ9BXW4 147 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 Q9HAA7 133 aa4.48□□□□□ -1.69
UPF3B-205ENST00000636792 TRAV13-1A0A0B4J241 112 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 C20orf202A1L168 122 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 C5orf52A6NGY3 159 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 F8VRH5 84 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 APOMO95445 188 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 PRSS1P07477 247 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 IGLC3P0DOY3 106 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 PLNP26678 52 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 PMCHL1Q16048 86 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 KRTAP26-1Q6PEX3 210 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 HIST3H2BBQ8N257 126 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 FAM19A2Q8N3H0 131 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 OR10D4PQ8NGN7 298 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
UPF3B-205ENST00000636792 CST9LQ9H4G1 147 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 GEMIN7Q9H840 131 aaKnown RBP4.47□□□□□ -1.69
UPF3B-205ENST00000636792 PKIGQ9Y2B9 76 aa4.47□□□□□ -1.69
UPF3B-205ENST00000636792 DNAH1Q9P2D7 4330 aa4.46□□□□□ -1.69
UPF3B-205ENST00000636792 A0A087WZ39 114 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 IGHV3OR16-9A0A0B4J2B5 98 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 IGHV1-58A0A0C4DH39 117 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 PRSS29PA6NIE9 313 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 H3BRM9 83 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 M0R2N4 97 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 COX7A2LO14548 114 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 NUPR1O60356 82 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 FOXI1Q12951 378 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 LINC00242Q5T6M2 205 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 SFTA2Q6UW10 78 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 CLPSL2Q6UWE3 100 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 NTN5Q8WTR8 489 aaPredicted RBP4.46□□□□□ -1.7
UPF3B-205ENST00000636792 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
UPF3B-205ENST00000636792 GVQW2A0A096LPI5 108 aaPredicted RBP4.45□□□□□ -1.7
UPF3B-205ENST00000636792 GAGE12HA6NDE8 117 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 SYS1-DBNDD2H3BUS1 97 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 MALP21145 153 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 CXCL5P42830 114 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 XCL1P47992 114 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 ODF1Q14990 250 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 RNASE13Q5GAN3 156 aaKnown RBP4.45□□□□□ -1.7
UPF3B-205ENST00000636792 HIST1H2BLQ99880 126 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
UPF3B-205ENST00000636792 CHAC1Q9BUX1 264 aa4.45□□□□□ -1.7
UPF3B-205ENST00000636792 CHTOPQ9Y3Y2 248 aaKnown RBP4.45□□□□□ -1.7
UPF3B-205ENST00000636792 KMT2AQ03164 3969 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 IGLV4-69A0A075B6H9 119 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 IGLV10-54A0A075B6I4 117 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 IGKV3OR2-268A0A0C4DH90 116 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 LRCOL1A6NCL2 159 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 C11orf86A6NJI1 115 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 RTL8CO15255 209 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 DPM2O94777 84 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 FABP4P15090 132 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 SNRPEP62304 92 aaKnown RBP4.44□□□□□ -1.7
UPF3B-205ENST00000636792 LINC01545Q5VT33 79 aa4.44□□□□□ -1.7
UPF3B-205ENST00000636792 IGHV3-64A0A075B6Q5 118 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 A0A087WTM6 91 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.43□□□□□ -1.7
UPF3B-205ENST00000636792 A0A0J9YXV3 536 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 IGKCP01834 107 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 C3orf79P0CE67 100 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 ZNF22P17026 224 aaPredicted RBP4.43□□□□□ -1.7
UPF3B-205ENST00000636792 HERVK_113P61574 105 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 Q8IZM0 81 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 LINC00469Q8N7U9 141 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 Q8N814 137 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 C2orf48Q96LS8 159 aa4.43□□□□□ -1.7
UPF3B-205ENST00000636792 MRPL35Q9NZE8 188 aaKnown RBP4.43□□□□□ -1.7
UPF3B-205ENST00000636792 RYR2Q92736 4967 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms