RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 MYO7BQ6PIF6 2116 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 Q6ZR03 302 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 C15orf56Q8N910 161 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 SNURFQ9Y675 71 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 TNRC6BQ9UPQ9 1833 aaKnown RBP1.77□□□□□ -2.13
CNOT1-223ENST00000628857 COL4A1P02462 1669 aa1.77□□□□□ -2.13
CNOT1-223ENST00000628857 ESPL1Q14674 2120 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 PLXNB2O15031 1838 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 IGLV10-54A0A075B6I4 117 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 IGHV1-18A0A0C4DH31 117 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 CXorf51AA0A1B0GTR3 108 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 CTXND1A0A1B0GTU2 59 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 LOC101927531A0A1B0GV80 90 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 SMIM27A0A1W2PRY6 76 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 A8MUU9 505 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 ELOF1P60002 83 aaKnown RBP1.76□□□□□ -2.13
CNOT1-223ENST00000628857 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 UBALD1Q8TB05 177 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 C20orf166-AS1Q96NR2 134 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 PRR15LQ9BU68 103 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 NDUFA4L2Q9NRX3 87 aa1.76□□□□□ -2.13
CNOT1-223ENST00000628857 NUP214P35658 2090 aaPredicted RBP1.76□□□□□ -2.13
CNOT1-223ENST00000628857 KIAA0100Q14667 2235 aaKnown RBP1.75□□□□□ -2.13
CNOT1-223ENST00000628857 CABIN1Q9Y6J0 2220 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 NRXN2Q9P2S2 1712 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 A0A087WVE0 104 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 IGKV3D-7A0A0C4DH55 119 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 TRBV7-4A0A0J9YYF1 115 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 TRBV10-1A0A0K0K1A3 114 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 HIGD1CA8MV81 97 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 H3BQ85 93 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 IGHV3-33P01772 117 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 PLNP26678 52 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.75□□□□□ -2.13
CNOT1-223ENST00000628857 TMEM105Q8N8V8 129 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 Q8TAT8 98 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 ORMDL1Q9P0S3 153 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 LENEPQ9Y5L5 61 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 V9GYV3 84 aa1.75□□□□□ -2.13
CNOT1-223ENST00000628857 ZNF831Q5JPB2 1677 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 LRRC37A3O60309 1634 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 IGHV3OR16-8A0A075B7F1 116 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 A0A096LNJ9 63 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 PPP1R17O96001 155 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 IGLV7-43P04211 117 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 FXYD6P3P58550 94 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 DEFB113Q30KQ7 82 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 FAM74A4Q5TZK3 123 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 CSAG1Q6PB30 78 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 COL5A1P20908 1838 aaPredicted RBP1.74□□□□□ -2.13
CNOT1-223ENST00000628857 ARHGAP32A7KAX9 2087 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 C4AP0C0L4 1744 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 C4BP0C0L5 1744 aa1.74□□□□□ -2.13
CNOT1-223ENST00000628857 FREM3P0C091 2139 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 TET1Q8NFU7 2136 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 CR1P17927 2039 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 IGKV3D-11A0A0A0MRZ8 115 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 A0A0J9YY99 117 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 TRBV6-5A0A0K0K1A5 114 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 ODF3BA8MYP8 253 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 C10orf142B7Z368 130 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 K7EMI3 77 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 IGHV3-53P01767 116 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 IGHV3-30P01768 117 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 IGHV3-30-5P0DP03 117 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 HMGA1P17096 107 aaKnown RBP1.73□□□□□ -2.13
CNOT1-223ENST00000628857 ERHP84090 104 aaKnown RBP1.73□□□□□ -2.13
CNOT1-223ENST00000628857 SPAG11BQ08648 103 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 LINC00483Q53H64 154 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 SPAG11AQ6PDA7 123 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 FDCSPQ8NFU4 85 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 WFDC6Q9BQY6 131 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 MINOS1-NBL1R4GNA1 71 aa1.73□□□□□ -2.13
CNOT1-223ENST00000628857 ARFGEF3Q5TH69 2177 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 IGHV3-64A0A075B6Q5 118 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 A0A1B0GUT8 65 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 A0A1W2PNM2 257 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 P0C880 135 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 NREPQ16612 68 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 ZNF833PQ6ZTB9 187 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 LYPD1Q8N2G4 141 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 TMEM263Q8WUH6 116 aaKnown RBP1.72□□□□□ -2.13
CNOT1-223ENST00000628857 DMAC1Q96GE9 116 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 AMELXQ99217 191 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 Q9BRP9 147 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 UBL5Q9BZL1 73 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 TIMM8BQ9Y5J9 83 aaPredicted RBP1.72□□□□□ -2.13
CNOT1-223ENST00000628857 MED12Q93074 2177 aa1.72□□□□□ -2.13
CNOT1-223ENST00000628857 DNAJC13O75165 2243 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 TRAV12-1A0A0B4J245 112 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 SPINK4O60575 86 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 NDUFB1O75438 58 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 CISD3P0C7P0 127 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 Q86TA4 180 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 SPANXA2-OT1Q8N9U9 137 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 Q8NAQ8 132 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 RNF5Q99942 180 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 LHFPL6Q9Y693 200 aa1.71□□□□□ -2.14
CNOT1-223ENST00000628857 INTS1Q8N201 2190 aaKnown RBP1.71□□□□□ -2.14
CNOT1-223ENST00000628857 IGLV2-18A0A075B6J9 118 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms