RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 FAM104AQ969W3 186 aa5.31□□□□□ -1.56
SPTAN1-213ENST00000627809 HIST1H2BNQ99877 126 aa5.31□□□□□ -1.56
SPTAN1-213ENST00000627809 HIST1H2BMQ99879 126 aa5.31□□□□□ -1.56
SPTAN1-213ENST00000627809 OPRPNQ99935 248 aaPredicted RBP5.31□□□□□ -1.56
SPTAN1-213ENST00000627809 VCX2Q9H322 139 aa5.31□□□□□ -1.56
SPTAN1-213ENST00000627809 A0A096LNJ9 63 aa5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 SERF1AO75920 110 aa5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 ATP5LO75964 103 aa5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 PMCHL1Q16048 86 aa5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 PDZD11Q5EBL8 140 aa5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 RNASE13Q5GAN3 156 aaKnown RBP5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 CHCHD10Q8WYQ3 142 aaPredicted RBP5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 AMELXQ99217 191 aa5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 C2orf88Q9BSF0 95 aa5.3□□□□□ -1.56
SPTAN1-213ENST00000627809 UBR4Q5T4S7 5183 aa5.29□□□□□ -1.56
SPTAN1-213ENST00000627809 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.29□□□□□ -1.56
SPTAN1-213ENST00000627809 TRAV13-1A0A0B4J241 112 aa5.29□□□□□ -1.56
SPTAN1-213ENST00000627809 IFITM10A6NMD0 228 aa5.29□□□□□ -1.56
SPTAN1-213ENST00000627809 EREGO14944 169 aa5.29□□□□□ -1.56
SPTAN1-213ENST00000627809 Q8N1X5 172 aa5.29□□□□□ -1.56
SPTAN1-213ENST00000627809 FAM19A2Q8N3H0 131 aa5.29□□□□□ -1.56
SPTAN1-213ENST00000627809 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 GAGE12HA6NDE8 117 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 PANO1I0J062 215 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 NUPR1O60356 82 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 NDUFA6P56556 154 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 LINC00310P59036 64 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 SEC11AP67812 179 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 PMVKQ15126 192 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 COA6Q5JTJ3 125 aaKnown RBP5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 CD164L2Q6UWJ8 174 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 LINC00173Q6ZV60 143 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 Q8N814 137 aa5.28□□□□□ -1.56
SPTAN1-213ENST00000627809 LEPROTL1O95214 131 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 PRSS1P07477 247 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 XCL1P47992 114 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 UBE2D1P51668 147 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 C14orf177Q52M58 125 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 ZC2HC1BQ5TFG8 222 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 CFAP161Q6P656 301 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 FAM19A3Q7Z5A8 133 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 IFI27L1Q96BM0 104 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 CST9LQ9H4G1 147 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 HSPB8Q9UJY1 196 aa5.27□□□□□ -1.57
SPTAN1-213ENST00000627809 COX7A2LO14548 114 aa5.26□□□□□ -1.57
SPTAN1-213ENST00000627809 FOXI1Q12951 378 aa5.26□□□□□ -1.57
SPTAN1-213ENST00000627809 IGLV5-52A0A0A0MRZ9 124 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 IGHV3OR16-9A0A0B4J2B5 98 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 TINCRA0A1B0GVN0 87 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 USP17L23D6RBM5 183 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 APOMO95445 188 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 FABP4P15090 132 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 MALP21145 153 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 GCSHP23434 173 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 KRTAP10-4P60372 401 aaPredicted RBP5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 HERVK_113P63121 156 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 LINC00242Q5T6M2 205 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 Q5VSD8 79 aa5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 PACRGQ96M98 296 aaPredicted RBP5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 GEMIN7Q9H840 131 aaKnown RBP5.25□□□□□ -1.57
SPTAN1-213ENST00000627809 TRAV12-1A0A0B4J245 112 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 IGHV1-58A0A0C4DH39 117 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 A0A0J9YXV3 536 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 SLPIP03973 132 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 S100A6P06703 90 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 COX6A2Q02221 97 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 Q6ZSA8 131 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 C5orf38Q86SI9 138 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 LINC01561Q8N1V8 128 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 PGPEP1Q9NXJ5 209 aa5.24□□□□□ -1.57
SPTAN1-213ENST00000627809 A0A087WZ39 114 aa5.23□□□□□ -1.57
SPTAN1-213ENST00000627809 MAP1LC3CQ9BXW4 147 aa5.23□□□□□ -1.57
SPTAN1-213ENST00000627809 hDV102S1A0JD36 115 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 ZNF561-AS1K7EIQ3 104 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 IGLC3P0DOY3 106 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 HNRNPA3P51991 378 aaKnown RBP5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 CDPF1Q6NVV7 123 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 SCXQ7RTU7 201 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 LINC00469Q8N7U9 141 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 C15orf56Q8N910 161 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 OR10D4PQ8NGN7 298 aa5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 CHTOPQ9Y3Y2 248 aaKnown RBP5.22□□□□□ -1.57
SPTAN1-213ENST00000627809 IGLV4-69A0A075B6H9 119 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 IGHV3-64A0A075B6Q5 118 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 IGLV5-45A0A087WSX0 123 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 GVQW2A0A096LPI5 108 aaPredicted RBP5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 F8VRH5 84 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 H0Y8G0 127 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 H3BRM9 83 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 S100A2P29034 98 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 HIGD2BQ4VC39 106 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 CHAC1Q9BUX1 264 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 CDKN2A-AS1Q9UH64 79 aa5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 DMBT1Q9UGM3 2413 aaPredicted RBP5.21□□□□□ -1.58
SPTAN1-213ENST00000627809 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.2□□□□□ -1.58
SPTAN1-213ENST00000627809 F8WDY8 70 aa5.2□□□□□ -1.58
SPTAN1-213ENST00000627809 SYS1-DBNDD2H3BUS1 97 aa5.2□□□□□ -1.58
SPTAN1-213ENST00000627809 SNRPEP62304 92 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms