RNA–Protein interactions for RNA: ENST00000627179.1

LINC01338-201, Transcript of long intergenic non-protein coding RNA 1338, humanhuman

TSL 3 BASIC

Gene LINC01338, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01338-201ENST00000627179 C11orf68Q9H3H3 251 aaKnown RBP3.64□□□□□ -1.83
LINC01338-201ENST00000627179 CST9LQ9H4G1 147 aa3.64□□□□□ -1.83
LINC01338-201ENST00000627179 Q9UF83 564 aa3.64□□□□□ -1.83
LINC01338-201ENST00000627179 CUBNO60494 3623 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 LOC100131303A0A0U1RQF7 123 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 F5H768 121 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 COX8AP10176 69 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 HTN3P15516 51 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 NMUP48645 174 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 MRPS36P82909 103 aaKnown RBP3.63□□□□□ -1.83
LINC01338-201ENST00000627179 MRPL52Q86TS9 123 aaKnown RBP3.63□□□□□ -1.83
LINC01338-201ENST00000627179 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 TMEM101Q96IK0 257 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 RETNQ9HD89 108 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 CELA1Q9UNI1 258 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 UBE2D4Q9Y2X8 147 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 ATRQ13535 2644 aa3.63□□□□□ -1.83
LINC01338-201ENST00000627179 OBSCNQ5VST9 7968 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 TRBV6-8A0A0A6YYG3 113 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 A0A0J9YY99 117 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 C11orf86A6NJI1 115 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 LINC00694P0DN24 101 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 FGF6P10767 208 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 ZNF25P17030 456 aaPredicted RBP3.62□□□□□ -1.83
LINC01338-201ENST00000627179 MRPL23Q16540 153 aaKnown RBP3.62□□□□□ -1.83
LINC01338-201ENST00000627179 DEFB121Q5J5C9 76 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 TMEM170BQ5T4T1 132 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 ADAMTSL4-AS1Q5T5F5 129 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 KPRPQ5T749 579 aaPredicted RBP3.62□□□□□ -1.83
LINC01338-201ENST00000627179 NTM-AS1Q6ZSK4 140 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 Q6ZUT4 128 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 SBSPONQ8IVN8 264 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 AMELXQ99217 191 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 CHCHD5Q9BSY4 110 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 CHAC1Q9BUX1 264 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
LINC01338-201ENST00000627179 ICOSQ9Y6W8 199 aa3.62□□□□□ -1.83
LINC01338-201ENST00000627179 IGLV4-69A0A075B6H9 119 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 TRAV26-1A0A087WT03 109 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 K7EIL1 84 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 M0R143 59 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 DLEU1O43261 78 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 PRB2P02812 416 aaPredicted RBP3.61□□□□□ -1.83
LINC01338-201ENST00000627179 TCTAP57738 103 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 SEC11AP67812 179 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 CTAG1AP78358 180 aa3.61□□□□□ -1.83
LINC01338-201ENST00000627179 CEMP1Q6PRD7 247 aaPredicted RBP3.61□□□□□ -1.83
LINC01338-201ENST00000627179 GEMIN7Q9H840 131 aaKnown RBP3.61□□□□□ -1.83
LINC01338-201ENST00000627179 MRPS16Q9Y3D3 137 aaKnown RBP3.61□□□□□ -1.83
LINC01338-201ENST00000627179 A0A096LPF7 62 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 TRAV8-6A0A0B4J262 113 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 A0A0J9YXV3 536 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 TINCRA0A1B0GVN0 87 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 E9PLD3 99 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 H3BNG1 76 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 H3BRM9 83 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 SIVA1O15304 175 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
LINC01338-201ENST00000627179 LGALS3P17931 250 aaKnown RBP3.6□□□□□ -1.83
LINC01338-201ENST00000627179 HERVK_113P63121 156 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 BATFQ16520 125 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 C12orf74Q32Q52 190 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 LBHQ53QV2 105 aaPredicted RBP3.6□□□□□ -1.83
LINC01338-201ENST00000627179 RNASE13Q5GAN3 156 aaKnown RBP3.6□□□□□ -1.83
LINC01338-201ENST00000627179 BOD1L2Q8IYS8 172 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 C11orf45Q8TAV5 145 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 MRAPQ8TCY5 172 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 PLEKHB2Q96CS7 222 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 VSIG2Q96IQ7 327 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 TM2D3Q9BRN9 247 aa3.6□□□□□ -1.83
LINC01338-201ENST00000627179 IGKV2D-26A0A0A0MRZ7 120 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 ZNF815PA8K554 130 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 TMEM262E9PQX1 116 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 LEPROTO15243 131 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 UBE2D1P51668 147 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 PCP2Q8IVA1 136 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 LINC00469Q8N7U9 141 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 CDC42SE2Q9NRR3 84 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 TENM1Q9UKZ4 2725 aa3.59□□□□□ -1.83
LINC01338-201ENST00000627179 DEFB131BA0A096LNP1 70 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 TRAV10A0A0B4J240 114 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 TRAV13-1A0A0B4J241 112 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 MYMXA0A1B0GTQ4 84 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 TMEM223A0PJW6 202 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 J3QQQ9 107 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 HINT1P49773 126 aaPredicted RBP3.58□□□□□ -1.84
LINC01338-201ENST00000627179 HSD52Q0P140 79 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 LELP1Q5T871 98 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 SCGB1D4Q6XE38 83 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 FAM19A3Q7Z5A8 133 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 FAM104AQ969W3 186 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 SNHG12Q9BXW3 62 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 HIGD1BQ9P298 99 aa3.58□□□□□ -1.84
LINC01338-201ENST00000627179 NIPBLQ6KC79 2804 aaeCLIP3.57□□□□□ -1.84
LINC01338-201ENST00000627179 IGLV4-60A0A075B6I1 120 aa3.57□□□□□ -1.84
LINC01338-201ENST00000627179 IGLV7-46A0A075B6I9 117 aa3.57□□□□□ -1.84
LINC01338-201ENST00000627179 IGHV3-64A0A075B6Q5 118 aa3.57□□□□□ -1.84
LINC01338-201ENST00000627179 IGHV1-58A0A0C4DH39 117 aa3.57□□□□□ -1.84
LINC01338-201ENST00000627179 IGKV3OR2-268A0A0C4DH90 116 aa3.57□□□□□ -1.84
LINC01338-201ENST00000627179 RBX1P62877 108 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms