RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 TGIF2-C20orf24A0A0A6YYL0 155 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 IGHV3OR16-9A0A0B4J2B5 98 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 PLA2G1BP04054 148 aaKnown RBP10.72□□□□□ -0.69
UBE3D-208ENST00000626828 INAFM2P0DMQ5 153 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 Q6ZN92 141 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 TEX43Q6ZNM6 134 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 LINC00528Q8N1L1 170 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 LINC00526Q96FQ7 95 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 TRAPPC1Q9Y5R8 145 aa10.72□□□□□ -0.69
UBE3D-208ENST00000626828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.72□□□□□ -0.69
UBE3D-208ENST00000626828 IGIPA6NJ69 53 aa10.71□□□□□ -0.69
UBE3D-208ENST00000626828 COX6A2Q02221 97 aa10.71□□□□□ -0.69
UBE3D-208ENST00000626828 SYCNQ0VAF6 134 aa10.71□□□□□ -0.69
UBE3D-208ENST00000626828 CIRBPQ14011 172 aaKnown RBP10.71□□□□□ -0.69
UBE3D-208ENST00000626828 PAPPA-AS1Q5QFB9 102 aa10.71□□□□□ -0.69
UBE3D-208ENST00000626828 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
UBE3D-208ENST00000626828 SRRM2Q9UQ35 2752 aaKnown RBP10.71□□□□□ -0.7
UBE3D-208ENST00000626828 LINC01546A6NGU7 62 aa10.7□□□□□ -0.7
UBE3D-208ENST00000626828 LINC01549A6NIU2 74 aa10.7□□□□□ -0.7
UBE3D-208ENST00000626828 TOMM6Q96B49 74 aa10.7□□□□□ -0.7
UBE3D-208ENST00000626828 C2orf48Q96LS8 159 aa10.7□□□□□ -0.7
UBE3D-208ENST00000626828 AMELXQ99217 191 aa10.7□□□□□ -0.7
UBE3D-208ENST00000626828 C2orf88Q9BSF0 95 aa10.7□□□□□ -0.7
UBE3D-208ENST00000626828 IGLV4-69A0A075B6H9 119 aa10.69□□□□□ -0.7
UBE3D-208ENST00000626828 PANO1I0J062 215 aa10.69□□□□□ -0.7
UBE3D-208ENST00000626828 LINC00242Q5T6M2 205 aa10.69□□□□□ -0.7
UBE3D-208ENST00000626828 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
UBE3D-208ENST00000626828 FA2HQ7L5A8 372 aa10.68□□□□□ -0.7
UBE3D-208ENST00000626828 ERASQ7Z444 233 aa10.68□□□□□ -0.7
UBE3D-208ENST00000626828 OR10D4PQ8NGN7 298 aa10.68□□□□□ -0.7
UBE3D-208ENST00000626828 TIMM17AQ99595 171 aa10.68□□□□□ -0.7
UBE3D-208ENST00000626828 VPS13BQ7Z7G8 4022 aa10.67□□□□□ -0.7
UBE3D-208ENST00000626828 F8WDY8 70 aa10.67□□□□□ -0.7
UBE3D-208ENST00000626828 UBE2D1P51668 147 aa10.67□□□□□ -0.7
UBE3D-208ENST00000626828 SCGB3A1Q96QR1 104 aa10.67□□□□□ -0.7
UBE3D-208ENST00000626828 CAMK2N2Q96S95 79 aa10.67□□□□□ -0.7
UBE3D-208ENST00000626828 SMCO4Q9NRQ5 59 aa10.67□□□□□ -0.7
UBE3D-208ENST00000626828 A0A087WYN8 130 aa10.66□□□□□ -0.7
UBE3D-208ENST00000626828 A0A087WZ39 114 aa10.66□□□□□ -0.7
UBE3D-208ENST00000626828 CHTF8P0CG12 524 aa10.66□□□□□ -0.7
UBE3D-208ENST00000626828 ZC2HC1BQ5TFG8 222 aa10.66□□□□□ -0.7
UBE3D-208ENST00000626828 SPACA4Q8TDM5 124 aa10.66□□□□□ -0.7
UBE3D-208ENST00000626828 ORAOV1Q8WV07 137 aa10.66□□□□□ -0.7
UBE3D-208ENST00000626828 LINC00474Q9P2X8 69 aa10.66□□□□□ -0.7
UBE3D-208ENST00000626828 FLG2Q5D862 2391 aaPredicted RBP10.66□□□□□ -0.7
UBE3D-208ENST00000626828 SEC11AP67812 179 aa10.65□□□□□ -0.7
UBE3D-208ENST00000626828 SPAG11BQ08648 103 aa10.65□□□□□ -0.7
UBE3D-208ENST00000626828 LINC00173Q6ZV60 143 aa10.65□□□□□ -0.7
UBE3D-208ENST00000626828 FAM19A3Q7Z5A8 133 aa10.65□□□□□ -0.7
UBE3D-208ENST00000626828 LINC01561Q8N1V8 128 aa10.65□□□□□ -0.7
UBE3D-208ENST00000626828 RNF151Q2KHN1 245 aa10.64□□□□□ -0.71
UBE3D-208ENST00000626828 MAJINQ3KP22 176 aa10.64□□□□□ -0.71
UBE3D-208ENST00000626828 Q6ZRU5 148 aa10.64□□□□□ -0.71
UBE3D-208ENST00000626828 SLC7A5P1Q8MH63 180 aa10.64□□□□□ -0.71
UBE3D-208ENST00000626828 IGKV2-24A0A0C4DH68 120 aa10.63□□□□□ -0.71
UBE3D-208ENST00000626828 LINC00614P0C842 121 aa10.63□□□□□ -0.71
UBE3D-208ENST00000626828 YPEL4Q96NS1 127 aa10.63□□□□□ -0.71
UBE3D-208ENST00000626828 PLAC8Q9NZF1 115 aa10.63□□□□□ -0.71
UBE3D-208ENST00000626828 A0A096LNI7 61 aa10.62□□□□□ -0.71
UBE3D-208ENST00000626828 LOC107984640A0A0U1RRK4 108 aa10.62□□□□□ -0.71
UBE3D-208ENST00000626828 C18orf32Q8TCD1 76 aa10.62□□□□□ -0.71
UBE3D-208ENST00000626828 NDUFA1O15239 70 aa10.61□□□□□ -0.71
UBE3D-208ENST00000626828 RAB5BP61020 215 aa10.61□□□□□ -0.71
UBE3D-208ENST00000626828 HERVK_113P63121 156 aa10.61□□□□□ -0.71
UBE3D-208ENST00000626828 STPG4Q8N801 248 aa10.6□□□□□ -0.71
UBE3D-208ENST00000626828 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
UBE3D-208ENST00000626828 MRPL35Q9NZE8 188 aaKnown RBP10.6□□□□□ -0.71
UBE3D-208ENST00000626828 RPL37AP61513 92 aaKnown RBP10.59□□□□□ -0.71
UBE3D-208ENST00000626828 GAGE2BQ13066 116 aa10.59□□□□□ -0.71
UBE3D-208ENST00000626828 KIAA0087Q14695 138 aa10.59□□□□□ -0.71
UBE3D-208ENST00000626828 A0A0J9YXV3 536 aa10.58□□□□□ -0.72
UBE3D-208ENST00000626828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.58□□□□□ -0.72
UBE3D-208ENST00000626828 PTTG1IPP53801 180 aa10.58□□□□□ -0.72
UBE3D-208ENST00000626828 KRTAP10-4P60372 401 aaPredicted RBP10.58□□□□□ -0.72
UBE3D-208ENST00000626828 UNQ6190/PRO20217Q6UXQ8 127 aa10.58□□□□□ -0.72
UBE3D-208ENST00000626828 URB1-AS1Q96HZ7 61 aa10.58□□□□□ -0.72
UBE3D-208ENST00000626828 CST9LQ9H4G1 147 aa10.58□□□□□ -0.72
UBE3D-208ENST00000626828 PMVKQ15126 192 aa10.57□□□□□ -0.72
UBE3D-208ENST00000626828 CBLN2Q8IUK8 224 aa10.57□□□□□ -0.72
UBE3D-208ENST00000626828 CDKN2A-AS1Q9UH64 79 aa10.57□□□□□ -0.72
UBE3D-208ENST00000626828 TINCRA0A1B0GVN0 87 aa10.56□□□□□ -0.72
UBE3D-208ENST00000626828 PRSS2P07478 247 aa10.56□□□□□ -0.72
UBE3D-208ENST00000626828 C6orf226Q5I0X4 101 aa10.56□□□□□ -0.72
UBE3D-208ENST00000626828 C7orf33Q8WU49 177 aa10.56□□□□□ -0.72
UBE3D-208ENST00000626828 HBDP02042 147 aa10.55□□□□□ -0.72
UBE3D-208ENST00000626828 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
UBE3D-208ENST00000626828 PACRGQ96M98 296 aaPredicted RBP10.55□□□□□ -0.72
UBE3D-208ENST00000626828 A0A096LNJ9 63 aa10.54□□□□□ -0.72
UBE3D-208ENST00000626828 TRBV30A0A0K0K1B3 111 aa10.54□□□□□ -0.72
UBE3D-208ENST00000626828 TOMM7Q9P0U1 55 aa10.54□□□□□ -0.72
UBE3D-208ENST00000626828 C6orf48Q9UBA6 75 aa10.54□□□□□ -0.72
UBE3D-208ENST00000626828 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
UBE3D-208ENST00000626828 CKS1BP61024 79 aa10.53□□□□□ -0.72
UBE3D-208ENST00000626828 RPL18AQ02543 176 aaKnown RBP10.53□□□□□ -0.72
UBE3D-208ENST00000626828 Q8IZM0 81 aa10.53□□□□□ -0.72
UBE3D-208ENST00000626828 LINC00469Q8N7U9 141 aa10.53□□□□□ -0.72
UBE3D-208ENST00000626828 ATP5LO75964 103 aa10.52□□□□□ -0.73
UBE3D-208ENST00000626828 NDUFA6P56556 154 aa10.52□□□□□ -0.73
UBE3D-208ENST00000626828 PDZD11Q5EBL8 140 aa10.52□□□□□ -0.73
UBE3D-208ENST00000626828 C2orf82Q6UX34 121 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms