RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 CARHSP1Q9Y2V2 147 aaKnown RBP7.91□□□□□ -1.14
LINC00963-217ENST00000624009 A0A087WYN8 130 aa7.9□□□□□ -1.14
LINC00963-217ENST00000624009 KRTAP29-1A8MX34 341 aaPredicted RBP7.9□□□□□ -1.14
LINC00963-217ENST00000624009 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.14
LINC00963-217ENST00000624009 RHEBQ15382 184 aa7.9□□□□□ -1.14
LINC00963-217ENST00000624009 RNASE13Q5GAN3 156 aaKnown RBP7.9□□□□□ -1.14
LINC00963-217ENST00000624009 PRSS3P2Q8NHM4 247 aa7.9□□□□□ -1.14
LINC00963-217ENST00000624009 TMEM141Q96I45 108 aa7.9□□□□□ -1.14
LINC00963-217ENST00000624009 GNB1LQ9BYB4 327 aa7.9□□□□□ -1.14
LINC00963-217ENST00000624009 CYSLTR1Q9Y271 337 aa7.9□□□□□ -1.14
LINC00963-217ENST00000624009 LRP1Q07954 4544 aaKnown RBP7.9□□□□□ -1.15
LINC00963-217ENST00000624009 IGLV4-69A0A075B6H9 119 aa7.89□□□□□ -1.15
LINC00963-217ENST00000624009 LINC01549A6NIU2 74 aa7.89□□□□□ -1.15
LINC00963-217ENST00000624009 IFITM10A6NMD0 228 aa7.89□□□□□ -1.15
LINC00963-217ENST00000624009 RNF151Q2KHN1 245 aa7.89□□□□□ -1.15
LINC00963-217ENST00000624009 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
LINC00963-217ENST00000624009 IGLV4-3A0A075B6K6 122 aa7.88□□□□□ -1.15
LINC00963-217ENST00000624009 MT-ND6P03923 174 aa7.88□□□□□ -1.15
LINC00963-217ENST00000624009 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
LINC00963-217ENST00000624009 PAPPA-AS1Q5QFB9 102 aa7.88□□□□□ -1.15
LINC00963-217ENST00000624009 C2orf66Q6UXQ4 117 aa7.88□□□□□ -1.15
LINC00963-217ENST00000624009 LINC01561Q8N1V8 128 aa7.88□□□□□ -1.15
LINC00963-217ENST00000624009 DPH3Q96FX2 82 aa7.88□□□□□ -1.15
LINC00963-217ENST00000624009 A0A087WZ39 114 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 TGIF2-C20orf24A0A0A6YYL0 155 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 LOC389332A0A1B0GUA5 103 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 Q6ZN92 141 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 TEX43Q6ZNM6 134 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 C5orf38Q86SI9 138 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 CAMK2N2Q96S95 79 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 AMELXQ99217 191 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 OPRPNQ99935 248 aaPredicted RBP7.87□□□□□ -1.15
LINC00963-217ENST00000624009 C2orf88Q9BSF0 95 aa7.87□□□□□ -1.15
LINC00963-217ENST00000624009 A0A096LNI7 61 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 LOC107984640A0A0U1RRK4 108 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 LINC01546A6NGU7 62 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 IGIPA6NJ69 53 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 OXTP01178 125 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 MAJINQ3KP22 176 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 LINC00242Q5T6M2 205 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 FAM19A3Q7Z5A8 133 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 C7orf33Q8WU49 177 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 TIMM17AQ99595 171 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
LINC00963-217ENST00000624009 PTTG1IPP53801 180 aa7.85□□□□□ -1.15
LINC00963-217ENST00000624009 SEC11AP67812 179 aa7.85□□□□□ -1.15
LINC00963-217ENST00000624009 SPAG11BQ08648 103 aa7.85□□□□□ -1.15
LINC00963-217ENST00000624009 Q6ZRU5 148 aa7.85□□□□□ -1.15
LINC00963-217ENST00000624009 LINC00526Q96FQ7 95 aa7.85□□□□□ -1.15
LINC00963-217ENST00000624009 VCX2Q9H322 139 aa7.85□□□□□ -1.15
LINC00963-217ENST00000624009 MRPL35Q9NZE8 188 aaKnown RBP7.85□□□□□ -1.15
LINC00963-217ENST00000624009 IGKV2-24A0A0C4DH68 120 aa7.84□□□□□ -1.15
LINC00963-217ENST00000624009 UBE2D1P51668 147 aa7.84□□□□□ -1.15
LINC00963-217ENST00000624009 STPG4Q8N801 248 aa7.84□□□□□ -1.15
LINC00963-217ENST00000624009 TOMM6Q96B49 74 aa7.84□□□□□ -1.15
LINC00963-217ENST00000624009 NDUFA1O15239 70 aa7.83□□□□□ -1.16
LINC00963-217ENST00000624009 LINC00173Q6ZV60 143 aa7.83□□□□□ -1.16
LINC00963-217ENST00000624009 ORAOV1Q8WV07 137 aa7.83□□□□□ -1.16
LINC00963-217ENST00000624009 ALKBH7Q9BT30 221 aaPredicted RBP7.83□□□□□ -1.16
LINC00963-217ENST00000624009 RPS10P5Q9NQ39 176 aa7.83□□□□□ -1.16
LINC00963-217ENST00000624009 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
LINC00963-217ENST00000624009 J3QL48 77 aa7.82□□□□□ -1.16
LINC00963-217ENST00000624009 TLX1NBP0CAT3 122 aa7.82□□□□□ -1.16
LINC00963-217ENST00000624009 NDUFA5Q16718 116 aa7.82□□□□□ -1.16
LINC00963-217ENST00000624009 KIAA1644Q3SXP7 199 aa7.82□□□□□ -1.16
LINC00963-217ENST00000624009 ERASQ7Z444 233 aa7.82□□□□□ -1.16
LINC00963-217ENST00000624009 SNAPINO95295 136 aa7.81□□□□□ -1.16
LINC00963-217ENST00000624009 HERVK_113P63121 156 aa7.81□□□□□ -1.16
LINC00963-217ENST00000624009 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
LINC00963-217ENST00000624009 SVBPQ8N300 66 aa7.81□□□□□ -1.16
LINC00963-217ENST00000624009 TRBV30A0A0K0K1B3 111 aa7.8□□□□□ -1.16
LINC00963-217ENST00000624009 MRPL18Q9H0U6 180 aaKnown RBP7.8□□□□□ -1.16
LINC00963-217ENST00000624009 FABP9Q0Z7S8 132 aa7.79□□□□□ -1.16
LINC00963-217ENST00000624009 APOC3P02656 99 aa7.78□□□□□ -1.16
LINC00963-217ENST00000624009 HNRNPA3P51991 378 aaKnown RBP7.78□□□□□ -1.16
LINC00963-217ENST00000624009 PRR3P79522 188 aaKnown RBP7.78□□□□□ -1.16
LINC00963-217ENST00000624009 GAGE2BQ13066 116 aa7.78□□□□□ -1.16
LINC00963-217ENST00000624009 SCGB3A1Q96QR1 104 aa7.78□□□□□ -1.16
LINC00963-217ENST00000624009 RPL18AQ02543 176 aaKnown RBP7.77□□□□□ -1.17
LINC00963-217ENST00000624009 ODF1Q14990 250 aa7.77□□□□□ -1.17
LINC00963-217ENST00000624009 FA2HQ7L5A8 372 aa7.77□□□□□ -1.17
LINC00963-217ENST00000624009 Q8IZM0 81 aa7.77□□□□□ -1.17
LINC00963-217ENST00000624009 C6orf48Q9UBA6 75 aa7.77□□□□□ -1.17
LINC00963-217ENST00000624009 IGLV5-45A0A087WSX0 123 aa7.76□□□□□ -1.17
LINC00963-217ENST00000624009 UNQ6190/PRO20217Q6UXQ8 127 aa7.76□□□□□ -1.17
LINC00963-217ENST00000624009 Q6ZRP5 223 aa7.76□□□□□ -1.17
LINC00963-217ENST00000624009 GEMIN7Q9H840 131 aaKnown RBP7.76□□□□□ -1.17
LINC00963-217ENST00000624009 SMCO4Q9NRQ5 59 aa7.76□□□□□ -1.17
LINC00963-217ENST00000624009 TRAPPC1Q9Y5R8 145 aa7.76□□□□□ -1.17
LINC00963-217ENST00000624009 A0A0J9YXV3 536 aa7.75□□□□□ -1.17
LINC00963-217ENST00000624009 TINCRA0A1B0GVN0 87 aa7.75□□□□□ -1.17
LINC00963-217ENST00000624009 PRSS2P07478 247 aa7.75□□□□□ -1.17
LINC00963-217ENST00000624009 CXCL5P42830 114 aa7.75□□□□□ -1.17
LINC00963-217ENST00000624009 C9orf116Q5BN46 136 aaPredicted RBP7.75□□□□□ -1.17
LINC00963-217ENST00000624009 C10orf25Q5T742 122 aa7.75□□□□□ -1.17
LINC00963-217ENST00000624009 PACRGQ96M98 296 aaPredicted RBP7.75□□□□□ -1.17
LINC00963-217ENST00000624009 A0A1W2PNN7 141 aa7.74□□□□□ -1.17
LINC00963-217ENST00000624009 NDUFC2-KCTD14E9PQ53 114 aa7.74□□□□□ -1.17
LINC00963-217ENST00000624009 ZC2HC1BQ5TFG8 222 aa7.74□□□□□ -1.17
LINC00963-217ENST00000624009 C18orf32Q8TCD1 76 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms