RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 KLK9Q2XQG4 91 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 DAZ4Q86SG3 579 aaKnown RBP7.81□□□□□ -1.16
CDH1-214ENST00000621016 DAZ3Q9NR90 486 aaKnown RBP7.81□□□□□ -1.16
CDH1-214ENST00000621016 HECTD1Q9ULT8 2610 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 H3BUA1 57 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 SERP2Q8N6R1 65 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 IMUPQ9GZP8 106 aa7.81□□□□□ -1.16
CDH1-214ENST00000621016 TRAV23DV6A0A075B6W5 121 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 K7EQG2 157 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 SOSTDC1Q6X4U4 206 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 TMEM61Q8N0U2 210 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 TMEM223A0PJW6 202 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 HIST2H2BCQ6DN03 193 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 DYNLRB2Q8TF09 96 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 USP17L23D6RBM5 183 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 H3BT86 120 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 Q9HAA7 133 aa7.8□□□□□ -1.16
CDH1-214ENST00000621016 K7EMT4 169 aa7.79□□□□□ -1.16
CDH1-214ENST00000621016 CFHR3Q02985 330 aa7.79□□□□□ -1.16
CDH1-214ENST00000621016 ADAMTSL4-AS1Q5T5F5 129 aa7.79□□□□□ -1.16
CDH1-214ENST00000621016 A0A0B4J2C4 111 aa7.79□□□□□ -1.16
CDH1-214ENST00000621016 FAM240AA0A1B0GVK7 77 aa7.79□□□□□ -1.16
CDH1-214ENST00000621016 TIRAPP58753 221 aa7.79□□□□□ -1.16
CDH1-214ENST00000621016 Q6ZSN1 163 aa7.79□□□□□ -1.16
CDH1-214ENST00000621016 HELZ2Q9BYK8 2649 aaKnown RBP7.79□□□□□ -1.16
CDH1-214ENST00000621016 TRBV27A0A0K0K1C4 114 aa7.78□□□□□ -1.16
CDH1-214ENST00000621016 TIMM21Q9BVV7 248 aa7.78□□□□□ -1.16
CDH1-214ENST00000621016 SNURFQ9Y675 71 aa7.78□□□□□ -1.16
CDH1-214ENST00000621016 FASNP49327 2511 aaKnown RBP7.78□□□□□ -1.16
CDH1-214ENST00000621016 IGKV3OR2-268A0A0C4DH90 116 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 DGAT2L7PQ6IED9 249 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 C20orf203Q8NBC4 194 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 NBPF19A0A087WUL8 3843 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 TRBV30A0A0K0K1B3 111 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 MED14OSP0DP75 135 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 TMEM141Q96I45 108 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 UPK3BQ9BT76 320 aa7.77□□□□□ -1.17
CDH1-214ENST00000621016 C5orf38Q86SI9 138 aa7.76□□□□□ -1.17
CDH1-214ENST00000621016 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.76□□□□□ -1.17
CDH1-214ENST00000621016 LST1O00453 97 aa7.76□□□□□ -1.17
CDH1-214ENST00000621016 BAALC-AS2P0C853 105 aa7.76□□□□□ -1.17
CDH1-214ENST00000621016 Q96MF0 132 aa7.76□□□□□ -1.17
CDH1-214ENST00000621016 IGLV4-3A0A075B6K6 122 aa7.75□□□□□ -1.17
CDH1-214ENST00000621016 GHRHP01286 108 aa7.75□□□□□ -1.17
CDH1-214ENST00000621016 PAPPA-AS1Q5QFB9 102 aa7.75□□□□□ -1.17
CDH1-214ENST00000621016 BBC3Q96PG8 261 aaPredicted RBP7.75□□□□□ -1.17
CDH1-214ENST00000621016 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
CDH1-214ENST00000621016 ZNF702PQ9H963 129 aa7.75□□□□□ -1.17
CDH1-214ENST00000621016 RBMY1BA6NDE4 496 aaKnown RBP7.75□□□□□ -1.17
CDH1-214ENST00000621016 RBMY1EA6NEQ0 496 aaKnown RBP7.75□□□□□ -1.17
CDH1-214ENST00000621016 RBMY1DP0C7P1 496 aaKnown RBP7.75□□□□□ -1.17
CDH1-214ENST00000621016 FP248Q71RG6 208 aaPredicted RBP7.75□□□□□ -1.17
CDH1-214ENST00000621016 C14orf132Q9NPU4 83 aa7.75□□□□□ -1.17
CDH1-214ENST00000621016 ATP5G1P05496 136 aa7.74□□□□□ -1.17
CDH1-214ENST00000621016 TRGV1A0A0A0MS02 117 aa7.74□□□□□ -1.17
CDH1-214ENST00000621016 AKAP9Q99996 3911 aa7.74□□□□□ -1.17
CDH1-214ENST00000621016 IGHV3-30-3P0DP02 117 aa7.73□□□□□ -1.17
CDH1-214ENST00000621016 AMELXQ99217 191 aa7.73□□□□□ -1.17
CDH1-214ENST00000621016 DNAL4O96015 105 aa7.73□□□□□ -1.17
CDH1-214ENST00000621016 A0A0J9YXY3 114 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 TIMM17BO60830 172 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 ACYP1P07311 99 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 IGHV4-31P0DP07 118 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
CDH1-214ENST00000621016 LINC00467Q9BRT7 94 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 WFDC10AQ9H1F0 79 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 NDUFA12Q9UI09 145 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 PLA2G2AP14555 144 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 Q6YL49 198 aa7.72□□□□□ -1.17
CDH1-214ENST00000621016 TRBV6-5A0A0K0K1A5 114 aa7.71□□□□□ -1.18
CDH1-214ENST00000621016 LINC00846Q9NV44 126 aa7.71□□□□□ -1.18
CDH1-214ENST00000621016 UBR5O95071 2799 aaPredicted RBP7.71□□□□□ -1.18
CDH1-214ENST00000621016 LRCOL1A6NCL2 159 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 MAP6D1Q9H9H5 199 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 LEPROTO15243 131 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 FAM19A1Q7Z5A9 133 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 STHQ8IWL8 128 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 TENM4Q6N022 2769 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 DSCR9P59020 149 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 RMI2Q96E14 147 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 C16orf95Q9H693 158 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 CDKN2A-AS1Q9UH64 79 aa7.7□□□□□ -1.18
CDH1-214ENST00000621016 A0A087WZ39 114 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 CXCL5P42830 114 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 XCL1P47992 114 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 DEFB121Q5J5C9 76 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 Q8N2B8 174 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 VWFP04275 2813 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 Q6ZTI0 123 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 PRIMA1Q86XR5 153 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 TMEM89A2RUT3 159 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 PMAIP1Q13794 54 aa7.68□□□□□ -1.18
CDH1-214ENST00000621016 ATRQ13535 2644 aa7.67□□□□□ -1.18
CDH1-214ENST00000621016 RPL28P46779 137 aaKnown RBP7.67□□□□□ -1.18
CDH1-214ENST00000621016 NOP10Q9NPE3 64 aaKnown RBP7.67□□□□□ -1.18
CDH1-214ENST00000621016 DEFB114Q30KQ6 69 aa7.67□□□□□ -1.18
CDH1-214ENST00000621016 INSP01308 110 aa7.67□□□□□ -1.18
CDH1-214ENST00000621016 LYPD5Q6UWN5 251 aa7.67□□□□□ -1.18
CDH1-214ENST00000621016 SPANXCQ9NY87 97 aa7.67□□□□□ -1.18
CDH1-214ENST00000621016 TOMM7Q9P0U1 55 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms