RNA–Protein interactions for RNA: ENST00000618464.1

SYNGR3-206, Transcript of synaptogyrin 3, humanhuman

TSL 1 (best) BASIC

Gene SYNGR3, Length 1,213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-206ENST00000618464 ORMDL3Q8N138 153 aa13.93□□□□□ -0.18
SYNGR3-206ENST00000618464 STPG4Q8N801 248 aa13.93□□□□□ -0.18
SYNGR3-206ENST00000618464 IGLV4-69A0A075B6H9 119 aa13.92□□□□□ -0.18
SYNGR3-206ENST00000618464 PHOX2AO14813 284 aa13.92□□□□□ -0.18
SYNGR3-206ENST00000618464 PRELID3AQ96N28 172 aa13.92□□□□□ -0.18
SYNGR3-206ENST00000618464 OPRPNQ99935 248 aaPredicted RBP13.92□□□□□ -0.18
SYNGR3-206ENST00000618464 SLC7A5P1Q8MH63 180 aa13.91□□□□□ -0.18
SYNGR3-206ENST00000618464 C7orf33Q8WU49 177 aa13.91□□□□□ -0.18
SYNGR3-206ENST00000618464 FAM104AQ969W3 186 aa13.9□□□□□ -0.18
SYNGR3-206ENST00000618464 SPANXA1Q9NS26 97 aa13.9□□□□□ -0.18
SYNGR3-206ENST00000618464 UBR4Q5T4S7 5183 aa13.9□□□□□ -0.18
SYNGR3-206ENST00000618464 RAB5AP20339 215 aa13.89□□□□□ -0.19
SYNGR3-206ENST00000618464 Q6ZRU5 148 aa13.89□□□□□ -0.19
SYNGR3-206ENST00000618464 PKIGQ9Y2B9 76 aa13.89□□□□□ -0.19
SYNGR3-206ENST00000618464 LOC389332A0A1B0GUA5 103 aa13.88□□□□□ -0.19
SYNGR3-206ENST00000618464 CAMK2N2Q96S95 79 aa13.87□□□□□ -0.19
SYNGR3-206ENST00000618464 LINC00474Q9P2X8 69 aa13.87□□□□□ -0.19
SYNGR3-206ENST00000618464 IFITM10A6NMD0 228 aa13.86□□□□□ -0.19
SYNGR3-206ENST00000618464 APOMO95445 188 aa13.86□□□□□ -0.19
SYNGR3-206ENST00000618464 MRPS36P82909 103 aaKnown RBP13.86□□□□□ -0.19
SYNGR3-206ENST00000618464 COX19Q49B96 90 aa13.86□□□□□ -0.19
SYNGR3-206ENST00000618464 LAMTOR2Q9Y2Q5 125 aa13.86□□□□□ -0.19
SYNGR3-206ENST00000618464 SPAG11BQ08648 103 aa13.85□□□□□ -0.19
SYNGR3-206ENST00000618464 GAGE2BQ13066 116 aa13.85□□□□□ -0.19
SYNGR3-206ENST00000618464 GNB1LQ9BYB4 327 aa13.85□□□□□ -0.19
SYNGR3-206ENST00000618464 MAP1LC3AQ9H492 121 aa13.84□□□□□ -0.19
SYNGR3-206ENST00000618464 LOC107984640A0A0U1RRK4 108 aa13.83□□□□□ -0.2
SYNGR3-206ENST00000618464 IFI27P40305 119 aaPredicted RBP13.83□□□□□ -0.2
SYNGR3-206ENST00000618464 PLA2G2DQ9UNK4 145 aa13.83□□□□□ -0.2
SYNGR3-206ENST00000618464 PTTG1IPP53801 180 aa13.82□□□□□ -0.2
SYNGR3-206ENST00000618464 ORAOV1Q8WV07 137 aa13.82□□□□□ -0.2
SYNGR3-206ENST00000618464 C2orf48Q96LS8 159 aa13.82□□□□□ -0.2
SYNGR3-206ENST00000618464 TGIF2-C20orf24A0A0A6YYL0 155 aa13.81□□□□□ -0.2
SYNGR3-206ENST00000618464 IGHV3OR16-9A0A0B4J2B5 98 aa13.81□□□□□ -0.2
SYNGR3-206ENST00000618464 MT-ND6P03923 174 aa13.81□□□□□ -0.2
SYNGR3-206ENST00000618464 PRR3P79522 188 aaKnown RBP13.81□□□□□ -0.2
SYNGR3-206ENST00000618464 KIAA1644Q3SXP7 199 aa13.81□□□□□ -0.2
SYNGR3-206ENST00000618464 IGLV4-3A0A075B6K6 122 aa13.8□□□□□ -0.2
SYNGR3-206ENST00000618464 A0A0J9YXV3 536 aa13.8□□□□□ -0.2
SYNGR3-206ENST00000618464 PRSS47A8MTI9 375 aa13.8□□□□□ -0.2
SYNGR3-206ENST00000618464 OR10D4PQ8NGN7 298 aa13.8□□□□□ -0.2
SYNGR3-206ENST00000618464 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.79□□□□□ -0.2
SYNGR3-206ENST00000618464 RPL18AQ02543 176 aaKnown RBP13.79□□□□□ -0.2
SYNGR3-206ENST00000618464 FABP9Q0Z7S8 132 aa13.79□□□□□ -0.2
SYNGR3-206ENST00000618464 Q8N8P6 123 aa13.79□□□□□ -0.2
SYNGR3-206ENST00000618464 PYGO1Q9Y3Y4 419 aa13.79□□□□□ -0.2
SYNGR3-206ENST00000618464 TMEM141Q96I45 108 aa13.78□□□□□ -0.2
SYNGR3-206ENST00000618464 MRPL18Q9H0U6 180 aaKnown RBP13.78□□□□□ -0.2
SYNGR3-206ENST00000618464 MT1HL1P0DM35 61 aa13.77□□□□□ -0.21
SYNGR3-206ENST00000618464 ZC2HC1BQ5TFG8 222 aa13.76□□□□□ -0.21
SYNGR3-206ENST00000618464 CYSLTR1Q9Y271 337 aa13.76□□□□□ -0.21
SYNGR3-206ENST00000618464 A0A1W2PNN7 141 aa13.75□□□□□ -0.21
SYNGR3-206ENST00000618464 C2orf66Q6UXQ4 117 aa13.75□□□□□ -0.21
SYNGR3-206ENST00000618464 NXT2Q9NPJ8 142 aaKnown RBP13.75□□□□□ -0.21
SYNGR3-206ENST00000618464 SMCO4Q9NRQ5 59 aa13.75□□□□□ -0.21
SYNGR3-206ENST00000618464 TRAPPC1Q9Y5R8 145 aa13.75□□□□□ -0.21
SYNGR3-206ENST00000618464 LINC00242Q5T6M2 205 aa13.74□□□□□ -0.21
SYNGR3-206ENST00000618464 C10orf25Q5T742 122 aa13.74□□□□□ -0.21
SYNGR3-206ENST00000618464 TEX43Q6ZNM6 134 aa13.74□□□□□ -0.21
SYNGR3-206ENST00000618464 NDUFA1O15239 70 aa13.73□□□□□ -0.21
SYNGR3-206ENST00000618464 ORMDL2Q53FV1 153 aa13.73□□□□□ -0.21
SYNGR3-206ENST00000618464 A0A087WZ39 114 aa13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 RNF151Q2KHN1 245 aa13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 C9orf116Q5BN46 136 aaPredicted RBP13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 UNQ6190/PRO20217Q6UXQ8 127 aa13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 Q6ZN92 141 aa13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 C2orf88Q9BSF0 95 aa13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 MRPL35Q9NZE8 188 aaKnown RBP13.72□□□□□ -0.21
SYNGR3-206ENST00000618464 K7EMI3 77 aa13.71□□□□□ -0.21
SYNGR3-206ENST00000618464 UBE2D1P51668 147 aa13.71□□□□□ -0.21
SYNGR3-206ENST00000618464 CBLN2Q8IUK8 224 aa13.71□□□□□ -0.21
SYNGR3-206ENST00000618464 F8WDY8 70 aa13.7□□□□□ -0.22
SYNGR3-206ENST00000618464 Q6ZRP5 223 aa13.7□□□□□ -0.22
SYNGR3-206ENST00000618464 LINC00173Q6ZV60 143 aa13.7□□□□□ -0.22
SYNGR3-206ENST00000618464 VCX2Q9H322 139 aa13.69□□□□□ -0.22
SYNGR3-206ENST00000618464 C6orf48Q9UBA6 75 aa13.69□□□□□ -0.22
SYNGR3-206ENST00000618464 YPEL4Q96NS1 127 aa13.68□□□□□ -0.22
SYNGR3-206ENST00000618464 IGIPA6NJ69 53 aa13.67□□□□□ -0.22
SYNGR3-206ENST00000618464 G0S2P27469 103 aa13.67□□□□□ -0.22
SYNGR3-206ENST00000618464 KIAA0087Q14695 138 aa13.67□□□□□ -0.22
SYNGR3-206ENST00000618464 AMELXQ99217 191 aa13.67□□□□□ -0.22
SYNGR3-206ENST00000618464 PHF5AQ7RTV0 110 aaKnown RBP13.66□□□□□ -0.22
SYNGR3-206ENST00000618464 C2orf82Q6UX34 121 aa13.65□□□□□ -0.22
SYNGR3-206ENST00000618464 FA2HQ7L5A8 372 aa13.65□□□□□ -0.22
SYNGR3-206ENST00000618464 GAGE2EQ4V326 116 aa13.64□□□□□ -0.23
SYNGR3-206ENST00000618464 SPINK6Q6UWN8 80 aa13.64□□□□□ -0.23
SYNGR3-206ENST00000618464 GAGE2DQ9UEU5 116 aa13.64□□□□□ -0.23
SYNGR3-206ENST00000618464 TNXBP22105 4242 aa13.63□□□□□ -0.23
SYNGR3-206ENST00000618464 FAM168BA1KXE4 195 aa13.63□□□□□ -0.23
SYNGR3-206ENST00000618464 NPSP0C0P6 89 aa13.63□□□□□ -0.23
SYNGR3-206ENST00000618464 TLX1NBP0CAT3 122 aa13.63□□□□□ -0.23
SYNGR3-206ENST00000618464 LINC01561Q8N1V8 128 aa13.62□□□□□ -0.23
SYNGR3-206ENST00000618464 TOMM6Q96B49 74 aa13.62□□□□□ -0.23
SYNGR3-206ENST00000618464 TOMM7Q9P0U1 55 aa13.62□□□□□ -0.23
SYNGR3-206ENST00000618464 PSORS1C2Q9UIG4 136 aa13.62□□□□□ -0.23
SYNGR3-206ENST00000618464 SRSF9Q13242 221 aaKnown RBP eCLIP13.61□□□□□ -0.23
SYNGR3-206ENST00000618464 FAM19A5Q7Z5A7 132 aaPredicted RBP13.61□□□□□ -0.23
SYNGR3-206ENST00000618464 LINC01600Q96MT4 127 aa13.61□□□□□ -0.23
SYNGR3-206ENST00000618464 PRSS2P07478 247 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms