RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 C10orf91Q5T1B1 145 aa14.09□□□□□ -0.15
CBWD3-212ENST00000616550 CYSLTR1Q9Y271 337 aa14.09□□□□□ -0.15
CBWD3-212ENST00000616550 KRTAP10-4P60372 401 aaPredicted RBP14.08□□□□□ -0.16
CBWD3-212ENST00000616550 C2orf66Q6UXQ4 117 aa14.08□□□□□ -0.16
CBWD3-212ENST00000616550 TMEM141Q96I45 108 aa14.08□□□□□ -0.16
CBWD3-212ENST00000616550 IGLV4-3A0A075B6K6 122 aa14.07□□□□□ -0.16
CBWD3-212ENST00000616550 GNB1LQ9BYB4 327 aa14.07□□□□□ -0.16
CBWD3-212ENST00000616550 RPS10P5Q9NQ39 176 aa14.07□□□□□ -0.16
CBWD3-212ENST00000616550 CARHSP1Q9Y2V2 147 aaKnown RBP14.07□□□□□ -0.16
CBWD3-212ENST00000616550 IGHV3OR16-9A0A0B4J2B5 98 aa14.06□□□□□ -0.16
CBWD3-212ENST00000616550 RHEBQ15382 184 aa14.06□□□□□ -0.16
CBWD3-212ENST00000616550 CAMK2N2Q96S95 79 aa14.06□□□□□ -0.16
CBWD3-212ENST00000616550 PLAC8Q9NZF1 115 aa14.06□□□□□ -0.16
CBWD3-212ENST00000616550 LINC00474Q9P2X8 69 aa14.06□□□□□ -0.16
CBWD3-212ENST00000616550 A0A096LNI7 61 aa14.05□□□□□ -0.16
CBWD3-212ENST00000616550 G0S2P27469 103 aa14.05□□□□□ -0.16
CBWD3-212ENST00000616550 COX19Q49B96 90 aa14.05□□□□□ -0.16
CBWD3-212ENST00000616550 Q6ZN92 141 aa14.05□□□□□ -0.16
CBWD3-212ENST00000616550 TEX43Q6ZNM6 134 aa14.05□□□□□ -0.16
CBWD3-212ENST00000616550 C2orf48Q96LS8 159 aa14.05□□□□□ -0.16
CBWD3-212ENST00000616550 TGIF2-C20orf24A0A0A6YYL0 155 aa14.04□□□□□ -0.16
CBWD3-212ENST00000616550 SPAG11BQ08648 103 aa14.04□□□□□ -0.16
CBWD3-212ENST00000616550 Q6ZRU5 148 aa14.04□□□□□ -0.16
CBWD3-212ENST00000616550 STPG4Q8N801 248 aa14.04□□□□□ -0.16
CBWD3-212ENST00000616550 OR10D4PQ8NGN7 298 aa14.04□□□□□ -0.16
CBWD3-212ENST00000616550 ORAOV1Q8WV07 137 aa14.03□□□□□ -0.16
CBWD3-212ENST00000616550 C2orf88Q9BSF0 95 aa14.03□□□□□ -0.16
CBWD3-212ENST00000616550 VCX2Q9H322 139 aa14.02□□□□□ -0.17
CBWD3-212ENST00000616550 LOC107984640A0A0U1RRK4 108 aa14.01□□□□□ -0.17
CBWD3-212ENST00000616550 NPSP0C0P6 89 aa14.01□□□□□ -0.17
CBWD3-212ENST00000616550 LINC00242Q5T6M2 205 aa14.01□□□□□ -0.17
CBWD3-212ENST00000616550 C7orf33Q8WU49 177 aa14.01□□□□□ -0.17
CBWD3-212ENST00000616550 J3QL48 77 aa14□□□□□ -0.17
CBWD3-212ENST00000616550 IGIPA6NJ69 53 aa13.99□□□□□ -0.17
CBWD3-212ENST00000616550 F8WDY8 70 aa13.99□□□□□ -0.17
CBWD3-212ENST00000616550 MT-ND6P03923 174 aa13.99□□□□□ -0.17
CBWD3-212ENST00000616550 UBE2D1P51668 147 aa13.99□□□□□ -0.17
CBWD3-212ENST00000616550 DMBT1Q9UGM3 2413 aaPredicted RBP13.98□□□□□ -0.17
CBWD3-212ENST00000616550 A0A087WZ39 114 aa13.98□□□□□ -0.17
CBWD3-212ENST00000616550 FABP9Q0Z7S8 132 aa13.98□□□□□ -0.17
CBWD3-212ENST00000616550 GAGE2BQ13066 116 aa13.98□□□□□ -0.17
CBWD3-212ENST00000616550 PAPPA-AS1Q5QFB9 102 aa13.98□□□□□ -0.17
CBWD3-212ENST00000616550 ZC2HC1BQ5TFG8 222 aa13.98□□□□□ -0.17
CBWD3-212ENST00000616550 AMELXQ99217 191 aa13.98□□□□□ -0.17
CBWD3-212ENST00000616550 ALKBH7Q9BT30 221 aaPredicted RBP13.98□□□□□ -0.17
CBWD3-212ENST00000616550 MRPL18Q9H0U6 180 aaKnown RBP13.98□□□□□ -0.17
CBWD3-212ENST00000616550 KRTAP29-1A8MX34 341 aaPredicted RBP13.97□□□□□ -0.17
CBWD3-212ENST00000616550 APOC3P02656 99 aa13.97□□□□□ -0.17
CBWD3-212ENST00000616550 PTTG1IPP53801 180 aa13.97□□□□□ -0.17
CBWD3-212ENST00000616550 NDUFA5Q16718 116 aa13.97□□□□□ -0.17
CBWD3-212ENST00000616550 TOMM6Q96B49 74 aa13.97□□□□□ -0.17
CBWD3-212ENST00000616550 NDUFA1O15239 70 aa13.96□□□□□ -0.17
CBWD3-212ENST00000616550 RNF151Q2KHN1 245 aa13.96□□□□□ -0.17
CBWD3-212ENST00000616550 LINC00173Q6ZV60 143 aa13.96□□□□□ -0.17
CBWD3-212ENST00000616550 TIMM17AQ99595 171 aa13.95□□□□□ -0.18
CBWD3-212ENST00000616550 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-212ENST00000616550 SNAPINO95295 136 aa13.94□□□□□ -0.18
CBWD3-212ENST00000616550 SVBPQ8N300 66 aa13.94□□□□□ -0.18
CBWD3-212ENST00000616550 MRPL35Q9NZE8 188 aaKnown RBP13.94□□□□□ -0.18
CBWD3-212ENST00000616550 A0A0J9YXV3 536 aa13.93□□□□□ -0.18
CBWD3-212ENST00000616550 HNRNPA3P51991 378 aaKnown RBP13.93□□□□□ -0.18
CBWD3-212ENST00000616550 RPL18AQ02543 176 aaKnown RBP13.93□□□□□ -0.18
CBWD3-212ENST00000616550 ERASQ7Z444 233 aa13.93□□□□□ -0.18
CBWD3-212ENST00000616550 LINC01561Q8N1V8 128 aa13.93□□□□□ -0.18
CBWD3-212ENST00000616550 SCGB3A1Q96QR1 104 aa13.93□□□□□ -0.18
CBWD3-212ENST00000616550 LINC01546A6NGU7 62 aa13.92□□□□□ -0.18
CBWD3-212ENST00000616550 LINC01549A6NIU2 74 aa13.92□□□□□ -0.18
CBWD3-212ENST00000616550 FA2HQ7L5A8 372 aa13.92□□□□□ -0.18
CBWD3-212ENST00000616550 MYCBP2O75592 4640 aa13.92□□□□□ -0.18
CBWD3-212ENST00000616550 OXTP01178 125 aa13.91□□□□□ -0.18
CBWD3-212ENST00000616550 SEC11AP67812 179 aa13.91□□□□□ -0.18
CBWD3-212ENST00000616550 UNQ6190/PRO20217Q6UXQ8 127 aa13.91□□□□□ -0.18
CBWD3-212ENST00000616550 SMCO4Q9NRQ5 59 aa13.91□□□□□ -0.18
CBWD3-212ENST00000616550 TRAPPC1Q9Y5R8 145 aa13.91□□□□□ -0.18
CBWD3-212ENST00000616550 KIAA0087Q14695 138 aa13.9□□□□□ -0.18
CBWD3-212ENST00000616550 FAM19A3Q7Z5A8 133 aa13.9□□□□□ -0.18
CBWD3-212ENST00000616550 HERVK_113P63121 156 aa13.89□□□□□ -0.19
CBWD3-212ENST00000616550 C10orf25Q5T742 122 aa13.89□□□□□ -0.19
CBWD3-212ENST00000616550 GEMIN7Q9H840 131 aaKnown RBP13.89□□□□□ -0.19
CBWD3-212ENST00000616550 C6orf48Q9UBA6 75 aa13.87□□□□□ -0.19
CBWD3-212ENST00000616550 PRSS2P07478 247 aa13.86□□□□□ -0.19
CBWD3-212ENST00000616550 A0A1W2PNN7 141 aa13.85□□□□□ -0.19
CBWD3-212ENST00000616550 C9orf116Q5BN46 136 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-212ENST00000616550 PACRGQ96M98 296 aaPredicted RBP13.85□□□□□ -0.19
CBWD3-212ENST00000616550 TRBV30A0A0K0K1B3 111 aa13.84□□□□□ -0.19
CBWD3-212ENST00000616550 TLX1NBP0CAT3 122 aa13.84□□□□□ -0.19
CBWD3-212ENST00000616550 PRR3P79522 188 aaKnown RBP13.84□□□□□ -0.19
CBWD3-212ENST00000616550 C2orf82Q6UX34 121 aa13.84□□□□□ -0.19
CBWD3-212ENST00000616550 TOMM7Q9P0U1 55 aa13.84□□□□□ -0.19
CBWD3-212ENST00000616550 CDKN2A-AS1Q9UH64 79 aa13.84□□□□□ -0.19
CBWD3-212ENST00000616550 C6orf226Q5I0X4 101 aa13.83□□□□□ -0.2
CBWD3-212ENST00000616550 CKS1BP61024 79 aa13.82□□□□□ -0.2
CBWD3-212ENST00000616550 Q6ZRP5 223 aa13.82□□□□□ -0.2
CBWD3-212ENST00000616550 CST9LQ9H4G1 147 aa13.82□□□□□ -0.2
CBWD3-212ENST00000616550 LINC00614P0C842 121 aa13.81□□□□□ -0.2
CBWD3-212ENST00000616550 GAGE2EQ4V326 116 aa13.81□□□□□ -0.2
CBWD3-212ENST00000616550 Q8IZM0 81 aa13.81□□□□□ -0.2
CBWD3-212ENST00000616550 LINC00469Q8N7U9 141 aa13.81□□□□□ -0.2
CBWD3-212ENST00000616550 C18orf32Q8TCD1 76 aa13.81□□□□□ -0.2
CBWD3-212ENST00000616550 GAGE2DQ9UEU5 116 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms