RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 ATOH7Q8N100 152 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 BAALCQ8WXS3 180 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 C2orf88Q9BSF0 95 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 FAM30AQ9NZY2 134 aa11.83□□□□□ -0.52
TRAPPC3-209ENST00000616395 IGLV5-52A0A0A0MRZ9 124 aa11.82□□□□□ -0.52
TRAPPC3-209ENST00000616395 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
TRAPPC3-209ENST00000616395 MRPL23Q16540 153 aaKnown RBP11.81□□□□□ -0.52
TRAPPC3-209ENST00000616395 ZNF664Q8N3J9 261 aa11.81□□□□□ -0.52
TRAPPC3-209ENST00000616395 ICOSQ9Y6W8 199 aa11.81□□□□□ -0.52
TRAPPC3-209ENST00000616395 ZNF25P17030 456 aaPredicted RBP11.8□□□□□ -0.52
TRAPPC3-209ENST00000616395 PMCHL2Q9BQD1 86 aa11.8□□□□□ -0.52
TRAPPC3-209ENST00000616395 CHCHD7Q9BUK0 85 aa11.8□□□□□ -0.52
TRAPPC3-209ENST00000616395 HERVK_113P61574 105 aa11.79□□□□□ -0.52
TRAPPC3-209ENST00000616395 LINC00528Q8N1L1 170 aa11.79□□□□□ -0.52
TRAPPC3-209ENST00000616395 MRPL35Q9NZE8 188 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-209ENST00000616395 CSDC2Q9Y534 153 aaKnown RBP11.79□□□□□ -0.52
TRAPPC3-209ENST00000616395 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
TRAPPC3-209ENST00000616395 MRPS36P82909 103 aaKnown RBP11.78□□□□□ -0.52
TRAPPC3-209ENST00000616395 PRO1933Q9H354 126 aa11.78□□□□□ -0.52
TRAPPC3-209ENST00000616395 CST9LQ9H4G1 147 aa11.78□□□□□ -0.52
TRAPPC3-209ENST00000616395 UQCR10Q9UDW1 63 aa11.78□□□□□ -0.52
TRAPPC3-209ENST00000616395 UBE2D4Q9Y2X8 147 aa11.78□□□□□ -0.52
TRAPPC3-209ENST00000616395 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 LOC100131303A0A0U1RQF7 123 aa11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 SEC11AP67812 179 aa11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 MRPL52Q86TS9 123 aaKnown RBP11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 CHCHD5Q9BSY4 110 aa11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 Q9UF83 564 aa11.77□□□□□ -0.53
TRAPPC3-209ENST00000616395 IGLV4-3A0A075B6K6 122 aa11.76□□□□□ -0.53
TRAPPC3-209ENST00000616395 LINC00694P0DN24 101 aa11.76□□□□□ -0.53
TRAPPC3-209ENST00000616395 MIEN1Q9BRT3 115 aa11.76□□□□□ -0.53
TRAPPC3-209ENST00000616395 FGF6P10767 208 aa11.75□□□□□ -0.53
TRAPPC3-209ENST00000616395 DDTP30046 118 aa11.75□□□□□ -0.53
TRAPPC3-209ENST00000616395 NTN5Q8WTR8 489 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC3-209ENST00000616395 hDV102S1A0JD36 115 aa11.74□□□□□ -0.53
TRAPPC3-209ENST00000616395 OXTP01178 125 aa11.74□□□□□ -0.53
TRAPPC3-209ENST00000616395 ZC2HC1BQ5TFG8 222 aa11.73□□□□□ -0.53
TRAPPC3-209ENST00000616395 SLC25A34Q6PIV7 304 aa11.73□□□□□ -0.53
TRAPPC3-209ENST00000616395 FAT3Q8TDW7 4589 aa11.72□□□□□ -0.53
TRAPPC3-209ENST00000616395 DNAH8Q96JB1 4490 aa11.72□□□□□ -0.53
TRAPPC3-209ENST00000616395 LRCOL1A6NCL2 159 aa11.72□□□□□ -0.53
TRAPPC3-209ENST00000616395 IGLC3P0DOY3 106 aa11.72□□□□□ -0.53
TRAPPC3-209ENST00000616395 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
TRAPPC3-209ENST00000616395 NTM-AS1Q6ZSK4 140 aa11.72□□□□□ -0.53
TRAPPC3-209ENST00000616395 AMELXQ99217 191 aa11.72□□□□□ -0.53
TRAPPC3-209ENST00000616395 GEMIN7Q9H840 131 aaKnown RBP11.71□□□□□ -0.53
TRAPPC3-209ENST00000616395 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
TRAPPC3-209ENST00000616395 TMEM262E9PQX1 116 aa11.7□□□□□ -0.54
TRAPPC3-209ENST00000616395 HNRNPA3P51991 378 aaKnown RBP11.7□□□□□ -0.54
TRAPPC3-209ENST00000616395 TMEM170BQ5T4T1 132 aa11.7□□□□□ -0.54
TRAPPC3-209ENST00000616395 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
TRAPPC3-209ENST00000616395 H3BRM9 83 aa11.69□□□□□ -0.54
TRAPPC3-209ENST00000616395 NMUP48645 174 aa11.69□□□□□ -0.54
TRAPPC3-209ENST00000616395 MAJINQ3KP22 176 aa11.69□□□□□ -0.54
TRAPPC3-209ENST00000616395 WFDC10BQ8IUB3 73 aa11.69□□□□□ -0.54
TRAPPC3-209ENST00000616395 Q8N814 137 aa11.69□□□□□ -0.54
TRAPPC3-209ENST00000616395 TRAV8-6A0A0B4J262 113 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 K7EP13 123 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 COX8AP10176 69 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 TIRAPP58753 221 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 GAGE6Q13070 117 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 Q6ZSA8 131 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 Q6ZUT4 128 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 STPG4Q8N801 248 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 C14orf144Q96I85 54 aa11.68□□□□□ -0.54
TRAPPC3-209ENST00000616395 TINCRA0A1B0GVN0 87 aa11.67□□□□□ -0.54
TRAPPC3-209ENST00000616395 PSCAO43653 123 aa11.67□□□□□ -0.54
TRAPPC3-209ENST00000616395 KRTAP10-4P60372 401 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC3-209ENST00000616395 HERVK_113P63121 156 aa11.67□□□□□ -0.54
TRAPPC3-209ENST00000616395 LELP1Q5T871 98 aa11.67□□□□□ -0.54
TRAPPC3-209ENST00000616395 OPRPNQ99935 248 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC3-209ENST00000616395 A0A1B0GUV1 79 aa11.66□□□□□ -0.54
TRAPPC3-209ENST00000616395 CDC42SE2Q9NRR3 84 aa11.66□□□□□ -0.54
TRAPPC3-209ENST00000616395 IGLV4-69A0A075B6H9 119 aa11.65□□□□□ -0.54
TRAPPC3-209ENST00000616395 CCL25O15444 150 aa11.65□□□□□ -0.54
TRAPPC3-209ENST00000616395 DLEU1O43261 78 aa11.65□□□□□ -0.54
TRAPPC3-209ENST00000616395 ANKRD39Q53RE8 183 aa11.65□□□□□ -0.54
TRAPPC3-209ENST00000616395 A0A0J9YXV3 536 aa11.64□□□□□ -0.55
TRAPPC3-209ENST00000616395 E9PLD3 99 aa11.64□□□□□ -0.55
TRAPPC3-209ENST00000616395 UBE2D1P51668 147 aa11.63□□□□□ -0.55
TRAPPC3-209ENST00000616395 PLEKHB2Q96CS7 222 aa11.63□□□□□ -0.55
TRAPPC3-209ENST00000616395 RNASE13Q5GAN3 156 aaKnown RBP11.62□□□□□ -0.55
TRAPPC3-209ENST00000616395 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
TRAPPC3-209ENST00000616395 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
TRAPPC3-209ENST00000616395 SS18Q15532 418 aa11.61□□□□□ -0.55
TRAPPC3-209ENST00000616395 FAM19A3Q7Z5A8 133 aa11.61□□□□□ -0.55
TRAPPC3-209ENST00000616395 C10orf126Q8N4M7 172 aa11.61□□□□□ -0.55
TRAPPC3-209ENST00000616395 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
TRAPPC3-209ENST00000616395 ZNF22P17026 224 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC3-209ENST00000616395 SCXQ7RTU7 201 aa11.6□□□□□ -0.55
TRAPPC3-209ENST00000616395 BOD1L2Q8IYS8 172 aa11.6□□□□□ -0.55
TRAPPC3-209ENST00000616395 LEPROTO15243 131 aa11.6□□□□□ -0.55
TRAPPC3-209ENST00000616395 RBX1P62877 108 aa11.6□□□□□ -0.55
TRAPPC3-209ENST00000616395 TMEM223A0PJW6 202 aa11.59□□□□□ -0.55
TRAPPC3-209ENST00000616395 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
TRAPPC3-209ENST00000616395 M0R143 59 aa11.59□□□□□ -0.55
TRAPPC3-209ENST00000616395 LRP2P98164 4655 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms