RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
TCF4-248ENST00000616053 ZNF702PQ9H963 129 aa9.37□□□□□ -0.91
TCF4-248ENST00000616053 ZNF106Q9H2Y7 1883 aaKnown RBP9.37□□□□□ -0.91
TCF4-248ENST00000616053 Q6JHZ5 121 aa9.37□□□□□ -0.91
TCF4-248ENST00000616053 CCDC140Q96MF4 163 aa9.37□□□□□ -0.91
TCF4-248ENST00000616053 IGFL2Q6UWQ7 119 aa9.36□□□□□ -0.91
TCF4-248ENST00000616053 MRGPRG-AS1Q2M3A8 158 aa9.36□□□□□ -0.91
TCF4-248ENST00000616053 PMAIP1Q13794 54 aa9.35□□□□□ -0.91
TCF4-248ENST00000616053 LRRC37AA6NMS7 1700 aa9.35□□□□□ -0.91
TCF4-248ENST00000616053 K7EQG2 157 aa9.35□□□□□ -0.91
TCF4-248ENST00000616053 SPINT4Q6UDR6 99 aa9.35□□□□□ -0.91
TCF4-248ENST00000616053 WFDC2Q14508 124 aa9.34□□□□□ -0.91
TCF4-248ENST00000616053 FXYD2P54710 66 aa9.34□□□□□ -0.91
TCF4-248ENST00000616053 PTPRSQ13332 1948 aa9.34□□□□□ -0.91
TCF4-248ENST00000616053 PYGO1Q9Y3Y4 419 aa9.34□□□□□ -0.91
TCF4-248ENST00000616053 BEAN1Q3B7T3 259 aa9.33□□□□□ -0.92
TCF4-248ENST00000616053 COX6A2Q02221 97 aa9.33□□□□□ -0.92
TCF4-248ENST00000616053 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.32□□□□□ -0.92
TCF4-248ENST00000616053 KIAA1549LQ6ZVL6 1849 aa9.32□□□□□ -0.92
TCF4-248ENST00000616053 FN1P02751 2386 aaKnown RBP9.32□□□□□ -0.92
TCF4-248ENST00000616053 LMO4P61968 165 aa9.32□□□□□ -0.92
TCF4-248ENST00000616053 COX17Q14061 63 aa9.32□□□□□ -0.92
TCF4-248ENST00000616053 LINC00575Q6W349 94 aa9.32□□□□□ -0.92
TCF4-248ENST00000616053 LINC00308Q8TCZ7 52 aa9.32□□□□□ -0.92
TCF4-248ENST00000616053 PROK1P58294 105 aa9.32□□□□□ -0.92
TCF4-248ENST00000616053 EBI3Q14213 229 aa9.32□□□□□ -0.92
TCF4-248ENST00000616053 UQCRQO14949 82 aa9.31□□□□□ -0.92
TCF4-248ENST00000616053 LINC00959A0A1B0GUT2 108 aa9.31□□□□□ -0.92
TCF4-248ENST00000616053 CYSRT1A8MQ03 144 aa9.31□□□□□ -0.92
TCF4-248ENST00000616053 FBXL19-AS1Q494R0 122 aa9.31□□□□□ -0.92
TCF4-248ENST00000616053 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
TCF4-248ENST00000616053 P0C879 139 aa9.31□□□□□ -0.92
TCF4-248ENST00000616053 RNASE8Q8TDE3 154 aaKnown RBP9.31□□□□□ -0.92
TCF4-248ENST00000616053 MYO9AB2RTY4 2548 aa9.3□□□□□ -0.92
TCF4-248ENST00000616053 Q6ZTC4 211 aa9.3□□□□□ -0.92
TCF4-248ENST00000616053 TYMSOSQ8TAI1 123 aa9.29□□□□□ -0.92
TCF4-248ENST00000616053 ADCYAP1P18509 176 aa9.29□□□□□ -0.92
TCF4-248ENST00000616053 PTH2Q96A98 100 aa9.29□□□□□ -0.92
TCF4-248ENST00000616053 HCG22E2RYF7 251 aa9.29□□□□□ -0.92
TCF4-248ENST00000616053 CRYGAP11844 174 aa9.29□□□□□ -0.92
TCF4-248ENST00000616053 KIAA0087Q14695 138 aa9.29□□□□□ -0.92
TCF4-248ENST00000616053 H0Y9P7 68 aa9.29□□□□□ -0.92
TCF4-248ENST00000616053 CDIP1Q9H305 208 aa9.28□□□□□ -0.92
TCF4-248ENST00000616053 E7EUB6 86 aa9.28□□□□□ -0.92
TCF4-248ENST00000616053 HIGD1BQ9P298 99 aa9.28□□□□□ -0.92
TCF4-248ENST00000616053 WDR87Q6ZQQ6 2873 aa9.28□□□□□ -0.92
TCF4-248ENST00000616053 LINC00173Q6ZV60 143 aa9.27□□□□□ -0.92
TCF4-248ENST00000616053 FLG2Q5D862 2391 aaPredicted RBP9.27□□□□□ -0.92
TCF4-248ENST00000616053 DEFB116Q30KQ4 102 aa9.27□□□□□ -0.93
TCF4-248ENST00000616053 PSMG3-AS1Q96PY0 264 aa9.27□□□□□ -0.93
TCF4-248ENST00000616053 MBD6Q96DN6 1003 aa9.27□□□□□ -0.93
TCF4-248ENST00000616053 C10orf99Q6UWK7 81 aa9.27□□□□□ -0.93
TCF4-248ENST00000616053 C2CD3Q4AC94 2353 aa9.27□□□□□ -0.93
TCF4-248ENST00000616053 NDUFS6O75380 124 aaKnown RBP9.26□□□□□ -0.93
TCF4-248ENST00000616053 LRP4O75096 1905 aa9.26□□□□□ -0.93
TCF4-248ENST00000616053 LOC105371267A0A1B0GV96 52 aa9.26□□□□□ -0.93
TCF4-248ENST00000616053 A0A087WSZ3 146 aa9.26□□□□□ -0.93
TCF4-248ENST00000616053 IGLV1-47P01700 117 aa9.26□□□□□ -0.93
TCF4-248ENST00000616053 IGLV4-3A0A075B6K6 122 aa9.26□□□□□ -0.93
TCF4-248ENST00000616053 EGFEM1PQ0D2K5 195 aa9.26□□□□□ -0.93
TCF4-248ENST00000616053 A0A1B0GU69 56 aa9.25□□□□□ -0.93
TCF4-248ENST00000616053 C1orf195Q5TG92 126 aa9.25□□□□□ -0.93
TCF4-248ENST00000616053 PIEZO1Q92508 2521 aa9.24□□□□□ -0.93
TCF4-248ENST00000616053 MRPS36P82909 103 aaKnown RBP9.24□□□□□ -0.93
TCF4-248ENST00000616053 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
TCF4-248ENST00000616053 CRIP2P52943 208 aaPredicted RBP9.24□□□□□ -0.93
TCF4-248ENST00000616053 NDUFA7O95182 113 aa9.23□□□□□ -0.93
TCF4-248ENST00000616053 GDF5OSQ5U4N7 250 aa9.23□□□□□ -0.93
TCF4-248ENST00000616053 LRRC37A2A6NM11 1700 aa9.23□□□□□ -0.93
TCF4-248ENST00000616053 SPAG11AQ6PDA7 123 aa9.23□□□□□ -0.93
TCF4-248ENST00000616053 ZNF524Q96C55 264 aa9.22□□□□□ -0.93
TCF4-248ENST00000616053 MUC7Q8TAX7 377 aa9.22□□□□□ -0.93
TCF4-248ENST00000616053 SMIM11BQ8TCY0 68 aa9.22□□□□□ -0.93
TCF4-248ENST00000616053 ZSWIM8A7E2V4 1837 aa9.22□□□□□ -0.93
TCF4-248ENST00000616053 COL11A2P13942 1736 aaPredicted RBP9.22□□□□□ -0.93
TCF4-248ENST00000616053 BRWD3Q6RI45 1802 aa9.22□□□□□ -0.93
TCF4-248ENST00000616053 UNQ6190/PRO20217Q6UXQ8 127 aa9.22□□□□□ -0.93
TCF4-248ENST00000616053 C20orf173Q96LM9 149 aa9.22□□□□□ -0.93
TCF4-248ENST00000616053 MOBPQ13875 183 aa9.21□□□□□ -0.94
TCF4-248ENST00000616053 CRIPAKQ8N1N5 446 aa9.21□□□□□ -0.94
TCF4-248ENST00000616053 Q8IZM0 81 aa9.21□□□□□ -0.94
TCF4-248ENST00000616053 NRXN2Q9P2S2 1712 aa9.2□□□□□ -0.94
TCF4-248ENST00000616053 COL5A3P25940 1745 aaPredicted RBP9.2□□□□□ -0.94
TCF4-248ENST00000616053 ZNF22P17026 224 aaPredicted RBP9.2□□□□□ -0.94
TCF4-248ENST00000616053 CHCHD7Q9BUK0 85 aa9.2□□□□□ -0.94
TCF4-248ENST00000616053 COL4A5P29400 1685 aa9.19□□□□□ -0.94
TCF4-248ENST00000616053 PSPHP1O15172 72 aa9.19□□□□□ -0.94
TCF4-248ENST00000616053 Q8N2B8 174 aa9.19□□□□□ -0.94
TCF4-248ENST00000616053 TRBV10-3A0A0K0K1G6 114 aa9.19□□□□□ -0.94
TCF4-248ENST00000616053 M0QY20 66 aa9.19□□□□□ -0.94
TCF4-248ENST00000616053 SOSTDC1Q6X4U4 206 aa9.19□□□□□ -0.94
TCF4-248ENST00000616053 EIF4EBP1Q13541 118 aaPredicted RBP9.18□□□□□ -0.94
TCF4-248ENST00000616053 TRIAP1O43715 76 aa9.18□□□□□ -0.94
TCF4-248ENST00000616053 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
TCF4-248ENST00000616053 TRBV7-7A0A0K0K1E9 115 aa9.18□□□□□ -0.94
TCF4-248ENST00000616053 C9orf116Q5BN46 136 aaPredicted RBP9.18□□□□□ -0.94
TCF4-248ENST00000616053 RSPO1Q2MKA7 263 aaPredicted RBP9.18□□□□□ -0.94
TCF4-248ENST00000616053 APLNQ9ULZ1 77 aa9.17□□□□□ -0.94
TCF4-248ENST00000616053 NTM-AS1Q6ZSK4 140 aa9.17□□□□□ -0.94
TCF4-248ENST00000616053 RPL37AP61513 92 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms