RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MT1HL1P0DM35 61 aa14.21□□□□□ -0.13
FAM228B-208ENST00000613899 GAGE2BQ13066 116 aa14.21□□□□□ -0.13
FAM228B-208ENST00000613899 FAM104AQ969W3 186 aa14.21□□□□□ -0.13
FAM228B-208ENST00000613899 ANAPC16Q96DE5 110 aa14.21□□□□□ -0.13
FAM228B-208ENST00000613899 LAMTOR2Q9Y2Q5 125 aa14.21□□□□□ -0.13
FAM228B-208ENST00000613899 IFI27P40305 119 aaPredicted RBP14.2□□□□□ -0.14
FAM228B-208ENST00000613899 MT-ND4LP03901 98 aa14.19□□□□□ -0.14
FAM228B-208ENST00000613899 OPRPNQ99935 248 aaPredicted RBP14.19□□□□□ -0.14
FAM228B-208ENST00000613899 PLA2G2DQ9UNK4 145 aa14.19□□□□□ -0.14
FAM228B-208ENST00000613899 IGHV3OR16-9A0A0B4J2B5 98 aa14.18□□□□□ -0.14
FAM228B-208ENST00000613899 ORAOV1Q8WV07 137 aa14.18□□□□□ -0.14
FAM228B-208ENST00000613899 HMCN2Q8NDA2 5059 aa14.18□□□□□ -0.14
FAM228B-208ENST00000613899 F8WDY8 70 aa14.17□□□□□ -0.14
FAM228B-208ENST00000613899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.17□□□□□ -0.14
FAM228B-208ENST00000613899 RPL18AQ02543 176 aaKnown RBP14.17□□□□□ -0.14
FAM228B-208ENST00000613899 RNF151Q2KHN1 245 aa14.17□□□□□ -0.14
FAM228B-208ENST00000613899 MAP1LC3AQ9H492 121 aa14.17□□□□□ -0.14
FAM228B-208ENST00000613899 PYGO1Q9Y3Y4 419 aa14.17□□□□□ -0.14
FAM228B-208ENST00000613899 PRSS47A8MTI9 375 aa14.16□□□□□ -0.14
FAM228B-208ENST00000613899 Q6ZRP5 223 aa14.16□□□□□ -0.14
FAM228B-208ENST00000613899 TGIF2-C20orf24A0A0A6YYL0 155 aa14.15□□□□□ -0.14
FAM228B-208ENST00000613899 MRPL35Q9NZE8 188 aaKnown RBP14.14□□□□□ -0.15
FAM228B-208ENST00000613899 IGLV4-3A0A075B6K6 122 aa14.13□□□□□ -0.15
FAM228B-208ENST00000613899 NDUFA1O15239 70 aa14.13□□□□□ -0.15
FAM228B-208ENST00000613899 TMEM141Q96I45 108 aa14.13□□□□□ -0.15
FAM228B-208ENST00000613899 LOC389332A0A1B0GUA5 103 aa14.12□□□□□ -0.15
FAM228B-208ENST00000613899 SPINK6Q6UWN8 80 aa14.12□□□□□ -0.15
FAM228B-208ENST00000613899 A0A0J9YXV3 536 aa14.11□□□□□ -0.15
FAM228B-208ENST00000613899 A0A1W2PNN7 141 aa14.11□□□□□ -0.15
FAM228B-208ENST00000613899 C9orf116Q5BN46 136 aaPredicted RBP14.11□□□□□ -0.15
FAM228B-208ENST00000613899 Q8N8P6 123 aa14.11□□□□□ -0.15
FAM228B-208ENST00000613899 IMMP2LQ96T52 175 aa14.11□□□□□ -0.15
FAM228B-208ENST00000613899 CLLU1Q5K131 121 aa14.1□□□□□ -0.15
FAM228B-208ENST00000613899 TEX43Q6ZNM6 134 aa14.1□□□□□ -0.15
FAM228B-208ENST00000613899 LINC01600Q96MT4 127 aa14.1□□□□□ -0.15
FAM228B-208ENST00000613899 CYSLTR1Q9Y271 337 aa14.1□□□□□ -0.15
FAM228B-208ENST00000613899 A0A087WZ39 114 aa14.09□□□□□ -0.15
FAM228B-208ENST00000613899 REG3GQ6UW15 175 aa14.09□□□□□ -0.15
FAM228B-208ENST00000613899 C2orf88Q9BSF0 95 aa14.09□□□□□ -0.15
FAM228B-208ENST00000613899 K7EMI3 77 aa14.08□□□□□ -0.16
FAM228B-208ENST00000613899 ORMDL2Q53FV1 153 aa14.08□□□□□ -0.16
FAM228B-208ENST00000613899 LINC00242Q5T6M2 205 aa14.08□□□□□ -0.16
FAM228B-208ENST00000613899 C2orf66Q6UXQ4 117 aa14.08□□□□□ -0.16
FAM228B-208ENST00000613899 Q6ZN92 141 aa14.08□□□□□ -0.16
FAM228B-208ENST00000613899 TLX1NBP0CAT3 122 aa14.06□□□□□ -0.16
FAM228B-208ENST00000613899 CTDSP1Q9GZU7 261 aa14.06□□□□□ -0.16
FAM228B-208ENST00000613899 NPSP0C0P6 89 aa14.05□□□□□ -0.16
FAM228B-208ENST00000613899 UBE2D1P51668 147 aa14.05□□□□□ -0.16
FAM228B-208ENST00000613899 SRSF9Q13242 221 aaKnown RBP eCLIP14.05□□□□□ -0.16
FAM228B-208ENST00000613899 C10orf25Q5T742 122 aa14.05□□□□□ -0.16
FAM228B-208ENST00000613899 UNQ6190/PRO20217Q6UXQ8 127 aa14.05□□□□□ -0.16
FAM228B-208ENST00000613899 NXT2Q9NPJ8 142 aaKnown RBP14.05□□□□□ -0.16
FAM228B-208ENST00000613899 UQCC3Q6UW78 93 aa14.04□□□□□ -0.16
FAM228B-208ENST00000613899 C6orf48Q9UBA6 75 aa14.04□□□□□ -0.16
FAM228B-208ENST00000613899 TNXBP22105 4242 aa14.03□□□□□ -0.16
FAM228B-208ENST00000613899 MT-ND6P03923 174 aa14.03□□□□□ -0.16
FAM228B-208ENST00000613899 KIAA0087Q14695 138 aa14.03□□□□□ -0.16
FAM228B-208ENST00000613899 LINC01561Q8N1V8 128 aa14.03□□□□□ -0.16
FAM228B-208ENST00000613899 AMELXQ99217 191 aa14.03□□□□□ -0.16
FAM228B-208ENST00000613899 LINC00173Q6ZV60 143 aa14.02□□□□□ -0.17
FAM228B-208ENST00000613899 PHF5AQ7RTV0 110 aaKnown RBP14.02□□□□□ -0.17
FAM228B-208ENST00000613899 VCX2Q9H322 139 aa14.02□□□□□ -0.17
FAM228B-208ENST00000613899 PSORS1C2Q9UIG4 136 aa14.02□□□□□ -0.17
FAM228B-208ENST00000613899 TRBV30A0A0K0K1B3 111 aa14.01□□□□□ -0.17
FAM228B-208ENST00000613899 G0S2P27469 103 aa14.01□□□□□ -0.17
FAM228B-208ENST00000613899 ADCYAP1P18509 176 aa14□□□□□ -0.17
FAM228B-208ENST00000613899 PAPPA-AS1Q5QFB9 102 aa14□□□□□ -0.17
FAM228B-208ENST00000613899 TRAV9-1A0A075B6T8 112 aa13.99□□□□□ -0.17
FAM228B-208ENST00000613899 IGIPA6NJ69 53 aa13.99□□□□□ -0.17
FAM228B-208ENST00000613899 PACRGQ96M98 296 aaPredicted RBP13.99□□□□□ -0.17
FAM228B-208ENST00000613899 TMEM218A2RU14 115 aa13.98□□□□□ -0.17
FAM228B-208ENST00000613899 GAGE2EQ4V326 116 aa13.98□□□□□ -0.17
FAM228B-208ENST00000613899 C1orf137Q5JT78 98 aa13.98□□□□□ -0.17
FAM228B-208ENST00000613899 ZC2HC1BQ5TFG8 222 aa13.98□□□□□ -0.17
FAM228B-208ENST00000613899 GAGE2DQ9UEU5 116 aa13.98□□□□□ -0.17
FAM228B-208ENST00000613899 FAM19A3Q7Z5A8 133 aa13.97□□□□□ -0.17
FAM228B-208ENST00000613899 FAM168BA1KXE4 195 aa13.96□□□□□ -0.17
FAM228B-208ENST00000613899 PRSS2P07478 247 aa13.96□□□□□ -0.17
FAM228B-208ENST00000613899 SEC11AP67812 179 aa13.96□□□□□ -0.17
FAM228B-208ENST00000613899 C2orf82Q6UX34 121 aa13.96□□□□□ -0.17
FAM228B-208ENST00000613899 FAM19A5Q7Z5A7 132 aaPredicted RBP13.96□□□□□ -0.17
FAM228B-208ENST00000613899 TIMM17AQ99595 171 aa13.96□□□□□ -0.17
FAM228B-208ENST00000613899 NDUFC2-KCTD14E9PQ53 114 aa13.95□□□□□ -0.18
FAM228B-208ENST00000613899 HERVK_113P63121 156 aa13.95□□□□□ -0.18
FAM228B-208ENST00000613899 S100PP25815 95 aa13.94□□□□□ -0.18
FAM228B-208ENST00000613899 KRTAP10-8P60410 259 aa13.94□□□□□ -0.18
FAM228B-208ENST00000613899 KIAA1644Q3SXP7 199 aa13.94□□□□□ -0.18
FAM228B-208ENST00000613899 TOMM6Q96B49 74 aa13.94□□□□□ -0.18
FAM228B-208ENST00000613899 SEC11CQ9BY50 192 aa13.94□□□□□ -0.18
FAM228B-208ENST00000613899 Q8IZM0 81 aa13.93□□□□□ -0.18
FAM228B-208ENST00000613899 KRTAP3-3Q9BYR6 98 aa13.93□□□□□ -0.18
FAM228B-208ENST00000613899 KRTAP3-2Q9BYR7 98 aa13.93□□□□□ -0.18
FAM228B-208ENST00000613899 TOMM7Q9P0U1 55 aa13.93□□□□□ -0.18
FAM228B-208ENST00000613899 UBR4Q5T4S7 5183 aa13.92□□□□□ -0.18
FAM228B-208ENST00000613899 CKS1BP61024 79 aa13.92□□□□□ -0.18
FAM228B-208ENST00000613899 IFITM2Q01629 132 aa13.92□□□□□ -0.18
FAM228B-208ENST00000613899 M0QXV9 152 aa13.91□□□□□ -0.18
FAM228B-208ENST00000613899 GNB1LQ9BYB4 327 aa13.91□□□□□ -0.18
FAM228B-208ENST00000613899 GEMIN7Q9H840 131 aaKnown RBP13.91□□□□□ -0.18
FAM228B-208ENST00000613899 IGLV7-43P04211 117 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms