RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 FAM222AQ5U5X8 452 aa15.91■□□□□ 0.14
POLR2J3-220ENST00000613744 CEMP1Q6PRD7 247 aaPredicted RBP15.9■□□□□ 0.14
POLR2J3-220ENST00000613744 SMCR5Q8TEV8 140 aa15.9■□□□□ 0.14
POLR2J3-220ENST00000613744 MDFIQ99750 246 aa15.9■□□□□ 0.14
POLR2J3-220ENST00000613744 CRYGAP11844 174 aa15.9■□□□□ 0.14
POLR2J3-220ENST00000613744 C3orf56Q8N813 242 aa15.9■□□□□ 0.14
POLR2J3-220ENST00000613744 UBE2E2Q96LR5 201 aa15.9■□□□□ 0.14
POLR2J3-220ENST00000613744 IGHV1OR15-1A0A075B7D0 117 aa15.89■□□□□ 0.13
POLR2J3-220ENST00000613744 K7EMT4 169 aa15.89■□□□□ 0.13
POLR2J3-220ENST00000613744 DAZ1Q9NQZ3 744 aaKnown RBP15.89■□□□□ 0.13
POLR2J3-220ENST00000613744 INAFM2P0DMQ5 153 aa15.88■□□□□ 0.13
POLR2J3-220ENST00000613744 HIST1H4AP62805 103 aaKnown RBP15.87■□□□□ 0.13
POLR2J3-220ENST00000613744 ATOX1O00244 68 aa15.86■□□□□ 0.13
POLR2J3-220ENST00000613744 TIRAPP58753 221 aa15.86■□□□□ 0.13
POLR2J3-220ENST00000613744 STAB1Q9NY15 2570 aa15.85■□□□□ 0.13
POLR2J3-220ENST00000613744 IGLV5-45A0A087WSX0 123 aa15.85■□□□□ 0.13
POLR2J3-220ENST00000613744 NPC2P61916 151 aa15.85■□□□□ 0.13
POLR2J3-220ENST00000613744 BEAN1Q3B7T3 259 aa15.84■□□□□ 0.13
POLR2J3-220ENST00000613744 LINC00308Q8TCZ7 52 aa15.84■□□□□ 0.13
POLR2J3-220ENST00000613744 IGKV3-7A0A075B6H7 116 aa15.83■□□□□ 0.13
POLR2J3-220ENST00000613744 DAZ2Q13117 558 aaKnown RBP15.83■□□□□ 0.13
POLR2J3-220ENST00000613744 DAZ4Q86SG3 579 aaKnown RBP15.83■□□□□ 0.13
POLR2J3-220ENST00000613744 C4orf3Q8WVX3 66 aa15.83■□□□□ 0.13
POLR2J3-220ENST00000613744 DAZ3Q9NR90 486 aaKnown RBP15.83■□□□□ 0.13
POLR2J3-220ENST00000613744 C2orf48Q96LS8 159 aa15.83■□□□□ 0.12
POLR2J3-220ENST00000613744 UBE2D4Q9Y2X8 147 aa15.83■□□□□ 0.12
POLR2J3-220ENST00000613744 SMIM9A6NGZ8 99 aa15.82■□□□□ 0.12
POLR2J3-220ENST00000613744 GAGE2AQ6NT46 116 aa15.82■□□□□ 0.12
POLR2J3-220ENST00000613744 BAALC-AS2P0C853 105 aa15.81■□□□□ 0.12
POLR2J3-220ENST00000613744 ZNF415Q09FC8 603 aa15.8■□□□□ 0.12
POLR2J3-220ENST00000613744 HOXD3P31249 432 aaPredicted RBP15.8■□□□□ 0.12
POLR2J3-220ENST00000613744 OR13C6PQ8NH95 151 aa15.8■□□□□ 0.12
POLR2J3-220ENST00000613744 CHCHD7Q9BUK0 85 aa15.8■□□□□ 0.12
POLR2J3-220ENST00000613744 SLURP1P55000 103 aa15.79■□□□□ 0.12
POLR2J3-220ENST00000613744 SYNJ2BPP57105 145 aa15.79■□□□□ 0.12
POLR2J3-220ENST00000613744 PIK3CD-AS1Q5SR53 167 aa15.79■□□□□ 0.12
POLR2J3-220ENST00000613744 WNK1Q9H4A3 2382 aa15.78■□□□□ 0.12
POLR2J3-220ENST00000613744 A8MZ25 164 aa15.78■□□□□ 0.12
POLR2J3-220ENST00000613744 TRRAPQ9Y4A5 3859 aa15.77■□□□□ 0.12
POLR2J3-220ENST00000613744 IGLV5-39A0A0G2JS06 123 aa15.77■□□□□ 0.12
POLR2J3-220ENST00000613744 CCL24O00175 119 aa15.77■□□□□ 0.12
POLR2J3-220ENST00000613744 FAM19A5Q7Z5A7 132 aaPredicted RBP15.77■□□□□ 0.12
POLR2J3-220ENST00000613744 EDN2P20800 178 aa15.77■□□□□ 0.11
POLR2J3-220ENST00000613744 SNRPD3P62318 126 aaKnown RBP15.77■□□□□ 0.11
POLR2J3-220ENST00000613744 WIPF1O43516 503 aa15.76■□□□□ 0.11
POLR2J3-220ENST00000613744 OVOL2Q9BRP0 275 aa15.76■□□□□ 0.11
POLR2J3-220ENST00000613744 LOC107984640A0A0U1RRK4 108 aa15.75■□□□□ 0.11
POLR2J3-220ENST00000613744 C22orf24Q9Y442 160 aa15.75■□□□□ 0.11
POLR2J3-220ENST00000613744 VWFP04275 2813 aa15.75■□□□□ 0.11
POLR2J3-220ENST00000613744 TRAV12-2A0A075B6T6 113 aa15.75■□□□□ 0.11
POLR2J3-220ENST00000613744 PF4P02776 101 aa15.74■□□□□ 0.11
POLR2J3-220ENST00000613744 CDKN2A-AS1Q9UH64 79 aa15.74■□□□□ 0.11
POLR2J3-220ENST00000613744 TMEM258P61165 79 aa15.74■□□□□ 0.11
POLR2J3-220ENST00000613744 RNASE13Q5GAN3 156 aaKnown RBP15.74■□□□□ 0.11
POLR2J3-220ENST00000613744 FAM19A3Q7Z5A8 133 aa15.73■□□□□ 0.11
POLR2J3-220ENST00000613744 RPL18AQ02543 176 aaKnown RBP15.72■□□□□ 0.11
POLR2J3-220ENST00000613744 Q9H8V8 135 aa15.72■□□□□ 0.11
POLR2J3-220ENST00000613744 K7EQG2 157 aa15.71■□□□□ 0.11
POLR2J3-220ENST00000613744 SPATA3Q8NHX4 192 aa15.71■□□□□ 0.11
POLR2J3-220ENST00000613744 KLK5Q9Y337 293 aaPredicted RBP15.71■□□□□ 0.11
POLR2J3-220ENST00000613744 MALP21145 153 aa15.71■□□□□ 0.1
POLR2J3-220ENST00000613744 Q6JHZ5 121 aa15.71■□□□□ 0.1
POLR2J3-220ENST00000613744 SPINK13Q1W4C9 94 aa15.7■□□□□ 0.1
POLR2J3-220ENST00000613744 RPL28P46779 137 aaKnown RBP15.68■□□□□ 0.1
POLR2J3-220ENST00000613744 SOSTDC1Q6X4U4 206 aa15.68■□□□□ 0.1
POLR2J3-220ENST00000613744 LINC00467Q9BRT7 94 aa15.68■□□□□ 0.1
POLR2J3-220ENST00000613744 ANK2Q01484 3957 aa15.67■□□□□ 0.1
POLR2J3-220ENST00000613744 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.67■□□□□ 0.1
POLR2J3-220ENST00000613744 TRAV13-2A0A0B4J235 113 aa15.67■□□□□ 0.1
POLR2J3-220ENST00000613744 IGKV2-29A2NJV5 120 aaPredicted RBP15.67■□□□□ 0.1
POLR2J3-220ENST00000613744 SERP2Q8N6R1 65 aa15.67■□□□□ 0.1
POLR2J3-220ENST00000613744 IGKV3-20P01619 116 aa15.66■□□□□ 0.1
POLR2J3-220ENST00000613744 hADV29S1A0JD25 119 aa15.65■□□□□ 0.1
POLR2J3-220ENST00000613744 FAM218AQ96MZ4 157 aa15.65■□□□□ 0.1
POLR2J3-220ENST00000613744 DNAL4O96015 105 aa15.64■□□□□ 0.09
POLR2J3-220ENST00000613744 LINC00482Q8N8I6 264 aa15.64■□□□□ 0.09
POLR2J3-220ENST00000613744 ZNF625Q96I27 306 aaPredicted RBP15.64■□□□□ 0.09
POLR2J3-220ENST00000613744 IGHV3-73A0A0B4J1V6 119 aa15.63■□□□□ 0.09
POLR2J3-220ENST00000613744 OBSCN-AS1Q96MR7 158 aa15.63■□□□□ 0.09
POLR2J3-220ENST00000613744 IGHV3-53P01767 116 aa15.63■□□□□ 0.09
POLR2J3-220ENST00000613744 DGAT2L7PQ6IED9 249 aa15.63■□□□□ 0.09
POLR2J3-220ENST00000613744 DPH3Q96FX2 82 aa15.63■□□□□ 0.09
POLR2J3-220ENST00000613744 SMIM1B2RUZ4 78 aa15.62■□□□□ 0.09
POLR2J3-220ENST00000613744 UPK3BQ9BT76 320 aa15.62■□□□□ 0.09
POLR2J3-220ENST00000613744 COX6A2Q02221 97 aa15.61■□□□□ 0.09
POLR2J3-220ENST00000613744 LINC00242Q5T6M2 205 aa15.61■□□□□ 0.09
POLR2J3-220ENST00000613744 IGHV3OR16-12A0A075B7B8 117 aa15.6■□□□□ 0.09
POLR2J3-220ENST00000613744 A8MTW9 85 aa15.59■□□□□ 0.09
POLR2J3-220ENST00000613744 DYNLRB2Q8TF09 96 aa15.59■□□□□ 0.09
POLR2J3-220ENST00000613744 PKD1L1Q8TDX9 2849 aa15.59■□□□□ 0.09
POLR2J3-220ENST00000613744 H0YGX0 51 aa15.58■□□□□ 0.09
POLR2J3-220ENST00000613744 CRPP02741 224 aa15.58■□□□□ 0.09
POLR2J3-220ENST00000613744 KRTAP21-3Q3LHN1 58 aa15.58■□□□□ 0.09
POLR2J3-220ENST00000613744 RBMY1A1P0DJD3 496 aaKnown RBP15.57■□□□□ 0.08
POLR2J3-220ENST00000613744 RBMY1CP0DJD4 496 aa15.57■□□□□ 0.08
POLR2J3-220ENST00000613744 RBMY1FQ15415 496 aaKnown RBP15.57■□□□□ 0.08
POLR2J3-220ENST00000613744 Q6ZSN1 163 aa15.57■□□□□ 0.08
POLR2J3-220ENST00000613744 TRAV25A0A0B4J276 109 aa15.56■□□□□ 0.08
POLR2J3-220ENST00000613744 NOTCH3Q9UM47 2321 aa15.56■□□□□ 0.08
POLR2J3-220ENST00000613744 DNHD1Q96M86 4753 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms