RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 CRIP1P50238 77 aa6.52□□□□□ -1.36
TTC28-208ENST00000612946 TMEM105Q8N8V8 129 aa6.52□□□□□ -1.36
TTC28-208ENST00000612946 PSPHP1O15172 72 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 Q8N9W7 124 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 KLLNB2CW77 178 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 CCL18P55774 89 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 RUSC1-AS1Q66K80 236 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 IGLV10-54A0A075B6I4 117 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 C8orf87E5RJ46 101 aa6.52□□□□□ -1.37
TTC28-208ENST00000612946 CTSZQ9UBR2 303 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 IGLV4-69A0A075B6H9 119 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 CHCHD10Q8WYQ3 142 aaPredicted RBP6.51□□□□□ -1.37
TTC28-208ENST00000612946 Q6ZS46 218 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 BEAN1Q3B7T3 259 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 C9orf66Q5T8R8 295 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 CEP295Q9C0D2 2601 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 SLPIP03973 132 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 C3orf84H3BNL1 204 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 PSMG3-AS1Q96PY0 264 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 TP53AIP1Q9HCN2 124 aa6.51□□□□□ -1.37
TTC28-208ENST00000612946 ODF3BA8MYP8 253 aa6.5□□□□□ -1.37
TTC28-208ENST00000612946 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
TTC28-208ENST00000612946 SCXQ7RTU7 201 aa6.5□□□□□ -1.37
TTC28-208ENST00000612946 COL4A6Q14031 1691 aa6.5□□□□□ -1.37
TTC28-208ENST00000612946 HILS1P60008 231 aa6.5□□□□□ -1.37
TTC28-208ENST00000612946 SPRNQ5BIV9 151 aa6.5□□□□□ -1.37
TTC28-208ENST00000612946 ZFAND3Q9H8U3 227 aa6.5□□□□□ -1.37
TTC28-208ENST00000612946 TRBV6-8A0A0A6YYG3 113 aa6.5□□□□□ -1.37
TTC28-208ENST00000612946 C4orf26Q17RF5 130 aa6.49□□□□□ -1.37
TTC28-208ENST00000612946 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
TTC28-208ENST00000612946 AMELXQ99217 191 aa6.49□□□□□ -1.37
TTC28-208ENST00000612946 NANOS2P60321 138 aaKnown RBP6.49□□□□□ -1.37
TTC28-208ENST00000612946 RITA1Q96K30 269 aa6.49□□□□□ -1.37
TTC28-208ENST00000612946 NHLRC4P0CG21 123 aaPredicted RBP6.49□□□□□ -1.37
TTC28-208ENST00000612946 PRM2P04554 102 aa6.48□□□□□ -1.37
TTC28-208ENST00000612946 IGF1P05019 195 aa6.48□□□□□ -1.37
TTC28-208ENST00000612946 URB1-AS1Q96HZ7 61 aa6.48□□□□□ -1.37
TTC28-208ENST00000612946 APRG1Q8IVJ8 170 aa6.47□□□□□ -1.37
TTC28-208ENST00000612946 FAM215AQ9Y5M1 114 aa6.47□□□□□ -1.37
TTC28-208ENST00000612946 K7EQG2 157 aa6.47□□□□□ -1.37
TTC28-208ENST00000612946 IGF2-ASQ6U949 168 aa6.47□□□□□ -1.37
TTC28-208ENST00000612946 E7EUB6 86 aa6.47□□□□□ -1.37
TTC28-208ENST00000612946 CRYGDP07320 174 aa6.47□□□□□ -1.37
TTC28-208ENST00000612946 C22orf34Q6ZV56 151 aa6.47□□□□□ -1.37
TTC28-208ENST00000612946 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.37
TTC28-208ENST00000612946 CRIP3Q6Q6R5 217 aa6.46□□□□□ -1.37
TTC28-208ENST00000612946 SPAG11AQ6PDA7 123 aa6.46□□□□□ -1.38
TTC28-208ENST00000612946 CEMP1Q6PRD7 247 aaPredicted RBP6.46□□□□□ -1.38
TTC28-208ENST00000612946 A0A087WVE0 104 aa6.46□□□□□ -1.38
TTC28-208ENST00000612946 LINC00269Q8N2A0 174 aa6.46□□□□□ -1.38
TTC28-208ENST00000612946 WFDC13Q8IUB5 93 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 KLK12Q9UKR0 248 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 Q6ZVQ6 151 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 RNF223E7ERA6 249 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 RNASE3P12724 160 aaKnown RBP6.45□□□□□ -1.38
TTC28-208ENST00000612946 DCANP1Q8TF63 244 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 CHCHD7Q9BUK0 85 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 COL27A1Q8IZC6 1860 aaPredicted RBP6.45□□□□□ -1.38
TTC28-208ENST00000612946 Q6ZPA2 131 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 Q8N7P7 452 aa6.45□□□□□ -1.38
TTC28-208ENST00000612946 RETNLBQ9BQ08 111 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 MAP6D1Q9H9H5 199 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 POM121L12Q8N7R1 296 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 IGFL2Q6UWQ7 119 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 H0Y9P7 68 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 IGHV4-59P01825 116 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 ATP11AUNQ6ZP68 121 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 C10orf25Q5T742 122 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 LINC00474Q9P2X8 69 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 IGLV2-18A0A075B6J9 118 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 CRIP2P52943 208 aaPredicted RBP6.44□□□□□ -1.38
TTC28-208ENST00000612946 KTN1-AS1Q86SY8 53 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 Q96MF0 132 aa6.44□□□□□ -1.38
TTC28-208ENST00000612946 C1orf137Q5JT78 98 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 A0A096LPF7 62 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 LY6G6EA0A0G2JKS1 128 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 SLURP1P55000 103 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 U3KQA8 63 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 C7orf65Q6ZTY9 151 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 PRRC2CQ9Y520 2896 aaKnown RBP6.43□□□□□ -1.38
TTC28-208ENST00000612946 A0A087WYN8 130 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 A0A096LNJ9 63 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 SMIM1B2RUZ4 78 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 SYCNQ0VAF6 134 aa6.43□□□□□ -1.38
TTC28-208ENST00000612946 CDC42SE2Q9NRR3 84 aa6.42□□□□□ -1.38
TTC28-208ENST00000612946 PRR15Q8IV56 129 aa6.42□□□□□ -1.38
TTC28-208ENST00000612946 PRR4Q16378 134 aa6.42□□□□□ -1.38
TTC28-208ENST00000612946 EGFEM1PQ0D2K5 195 aa6.42□□□□□ -1.38
TTC28-208ENST00000612946 UNQ9165/PRO28630Q6UXU0 137 aa6.42□□□□□ -1.38
TTC28-208ENST00000612946 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
TTC28-208ENST00000612946 LINC00242Q5T6M2 205 aa6.41□□□□□ -1.38
TTC28-208ENST00000612946 KLKP1Q107X0 134 aa6.41□□□□□ -1.38
TTC28-208ENST00000612946 LY6HO94772 140 aa6.41□□□□□ -1.38
TTC28-208ENST00000612946 LY6LH3BQJ8 138 aa6.41□□□□□ -1.38
TTC28-208ENST00000612946 J3QKU1 62 aa6.41□□□□□ -1.38
TTC28-208ENST00000612946 FAM19A1Q7Z5A9 133 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms