RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 XCL1P47992 114 aa11.84□□□□□ -0.51
SREK1-216ENST00000612404 FAM19A3Q7Z5A8 133 aa11.84□□□□□ -0.51
SREK1-216ENST00000612404 TRAV9-2A0A087WT02 112 aa11.84□□□□□ -0.51
SREK1-216ENST00000612404 PAM16Q9Y3D7 125 aa11.84□□□□□ -0.51
SREK1-216ENST00000612404 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
SREK1-216ENST00000612404 C10orf126Q8N4M7 172 aa11.83□□□□□ -0.52
SREK1-216ENST00000612404 CHCHD10Q8WYQ3 142 aaPredicted RBP11.83□□□□□ -0.52
SREK1-216ENST00000612404 CDKN2A-AS1Q9UH64 79 aa11.83□□□□□ -0.52
SREK1-216ENST00000612404 MIAQ16674 131 aa11.82□□□□□ -0.52
SREK1-216ENST00000612404 CTAG1AP78358 180 aa11.81□□□□□ -0.52
SREK1-216ENST00000612404 Q9HAA7 133 aa11.81□□□□□ -0.52
SREK1-216ENST00000612404 TRAV8-4A0A0B4J246 113 aa11.8□□□□□ -0.52
SREK1-216ENST00000612404 IBA57-AS1B1ANH7 110 aa11.8□□□□□ -0.52
SREK1-216ENST00000612404 SPATA45Q537H7 98 aa11.8□□□□□ -0.52
SREK1-216ENST00000612404 IGLV5-45A0A087WSX0 123 aa11.8□□□□□ -0.52
SREK1-216ENST00000612404 H3BRM9 83 aa11.8□□□□□ -0.52
SREK1-216ENST00000612404 IGHV3-64A0A075B6Q5 118 aa11.79□□□□□ -0.52
SREK1-216ENST00000612404 CD164L2Q6UWJ8 174 aa11.79□□□□□ -0.52
SREK1-216ENST00000612404 TRAV8-3A0A0A6YYJ7 113 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 IGHV3OR16-9A0A0B4J2B5 98 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 K7EP13 123 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 SPINK8P0C7L1 97 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 HERVK_113P61574 105 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 ANKRD39Q53RE8 183 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 C5orf38Q86SI9 138 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 IGKV2D-24A0A075B6R9 120 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 TMEM223A0PJW6 202 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 GAGE12HA6NDE8 117 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 C1orf43Q9BWL3 253 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 KRTAP1-5Q9BYS1 174 aa11.78□□□□□ -0.52
SREK1-216ENST00000612404 LY6G6CO95867 125 aa11.77□□□□□ -0.52
SREK1-216ENST00000612404 NMUP48645 174 aa11.76□□□□□ -0.53
SREK1-216ENST00000612404 NBDYA0A0U1RRE5 68 aa11.75□□□□□ -0.53
SREK1-216ENST00000612404 COX7A2LO14548 114 aa11.75□□□□□ -0.53
SREK1-216ENST00000612404 FOXI1Q12951 378 aa11.75□□□□□ -0.53
SREK1-216ENST00000612404 TTC32Q5I0X7 151 aa11.75□□□□□ -0.53
SREK1-216ENST00000612404 A0A087WZ39 114 aa11.75□□□□□ -0.53
SREK1-216ENST00000612404 IGKV2D-26A0A0A0MRZ7 120 aa11.74□□□□□ -0.53
SREK1-216ENST00000612404 LINC00476Q8WZB0 136 aa11.74□□□□□ -0.53
SREK1-216ENST00000612404 ALMS1Q8TCU4 4167 aa11.74□□□□□ -0.53
SREK1-216ENST00000612404 SMIM1B2RUZ4 78 aa11.74□□□□□ -0.53
SREK1-216ENST00000612404 E9PLD3 99 aa11.74□□□□□ -0.53
SREK1-216ENST00000612404 MALP21145 153 aa11.74□□□□□ -0.53
SREK1-216ENST00000612404 M0R2N4 97 aa11.73□□□□□ -0.53
SREK1-216ENST00000612404 KMT2AQ03164 3969 aa11.72□□□□□ -0.53
SREK1-216ENST00000612404 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
SREK1-216ENST00000612404 RMI2Q96E14 147 aa11.72□□□□□ -0.53
SREK1-216ENST00000612404 KRTAP26-1Q6PEX3 210 aa11.72□□□□□ -0.53
SREK1-216ENST00000612404 C14orf144Q96I85 54 aa11.72□□□□□ -0.53
SREK1-216ENST00000612404 PRO1933Q9H354 126 aa11.72□□□□□ -0.53
SREK1-216ENST00000612404 LEPROTO15243 131 aa11.71□□□□□ -0.54
SREK1-216ENST00000612404 IGLV5-39A0A0G2JS06 123 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 J3QQQ9 107 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 TSPEAR-AS2P59090 65 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 PCP2Q8IVA1 136 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 PLEKHB2Q96CS7 222 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 TTTY13Q9BZ97 58 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 TOMM7Q9P0U1 55 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 LGALS3P17931 250 aaKnown RBP11.69□□□□□ -0.54
SREK1-216ENST00000612404 DNAH10Q8IVF4 4471 aa11.69□□□□□ -0.54
SREK1-216ENST00000612404 LINC01561Q8N1V8 128 aa11.68□□□□□ -0.54
SREK1-216ENST00000612404 ORAOV1Q8WV07 137 aa11.68□□□□□ -0.54
SREK1-216ENST00000612404 APOMO95445 188 aa11.67□□□□□ -0.54
SREK1-216ENST00000612404 COX8AP10176 69 aa11.67□□□□□ -0.54
SREK1-216ENST00000612404 TM2D2Q9BX73 214 aa11.67□□□□□ -0.54
SREK1-216ENST00000612404 COX11Q9Y6N1 276 aa11.67□□□□□ -0.54
SREK1-216ENST00000612404 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
SREK1-216ENST00000612404 COX7B2Q8TF08 81 aa11.66□□□□□ -0.54
SREK1-216ENST00000612404 TP73-AS1Q9UF72 201 aa11.66□□□□□ -0.54
SREK1-216ENST00000612404 DNAH6Q9C0G6 4158 aa11.66□□□□□ -0.54
SREK1-216ENST00000612404 TSTD3H0UI37 97 aa11.66□□□□□ -0.54
SREK1-216ENST00000612404 PSCAO43653 123 aa11.66□□□□□ -0.54
SREK1-216ENST00000612404 PRSS2P07478 247 aa11.65□□□□□ -0.54
SREK1-216ENST00000612404 SLC25A34Q6PIV7 304 aa11.65□□□□□ -0.54
SREK1-216ENST00000612404 MAPKAPK5-AS1Q8N8E1 139 aa11.65□□□□□ -0.54
SREK1-216ENST00000612404 ZNF815PA8K554 130 aa11.65□□□□□ -0.55
SREK1-216ENST00000612404 C6orf226Q5I0X4 101 aa11.64□□□□□ -0.55
SREK1-216ENST00000612404 Q6ZR54 194 aa11.63□□□□□ -0.55
SREK1-216ENST00000612404 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
SREK1-216ENST00000612404 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
SREK1-216ENST00000612404 BOD1L2Q8IYS8 172 aa11.63□□□□□ -0.55
SREK1-216ENST00000612404 UQCR10Q9UDW1 63 aa11.63□□□□□ -0.55
SREK1-216ENST00000612404 SPAG11BQ08648 103 aa11.62□□□□□ -0.55
SREK1-216ENST00000612404 CFAP161Q6P656 301 aa11.62□□□□□ -0.55
SREK1-216ENST00000612404 Q8IZM0 81 aa11.62□□□□□ -0.55
SREK1-216ENST00000612404 HIGD2BQ4VC39 106 aa11.62□□□□□ -0.55
SREK1-216ENST00000612404 C15orf56Q8N910 161 aa11.62□□□□□ -0.55
SREK1-216ENST00000612404 LINC00526Q96FQ7 95 aa11.62□□□□□ -0.55
SREK1-216ENST00000612404 LECT2O14960 151 aa11.61□□□□□ -0.55
SREK1-216ENST00000612404 MIEN1Q9BRT3 115 aa11.6□□□□□ -0.55
SREK1-216ENST00000612404 HYDINQ4G0P3 5121 aa11.6□□□□□ -0.55
SREK1-216ENST00000612404 USP17L23D6RBM5 183 aa11.6□□□□□ -0.55
SREK1-216ENST00000612404 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
SREK1-216ENST00000612404 CKS1BP61024 79 aa11.6□□□□□ -0.55
SREK1-216ENST00000612404 KIAA0087Q14695 138 aa11.6□□□□□ -0.55
SREK1-216ENST00000612404 C6orf223Q8N319 242 aa11.6□□□□□ -0.55
SREK1-216ENST00000612404 DNAH2Q9P225 4427 aa11.59□□□□□ -0.55
SREK1-216ENST00000612404 NDUFA1O15239 70 aa11.59□□□□□ -0.55
SREK1-216ENST00000612404 DLEU1O43261 78 aa11.59□□□□□ -0.55
SREK1-216ENST00000612404 C2orf82Q6UX34 121 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 283.1 ms