RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 CDIP1Q9H305 208 aa12.78□□□□□ -0.36
SNAPC3-207ENST00000610884 SCGB1C2P0DMR2 95 aa12.77□□□□□ -0.37
SNAPC3-207ENST00000610884 F5H768 121 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 PRO1854Q9UHT4 67 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 A0A0J9YXV3 536 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 Q6ZUT4 128 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 TEN1Q86WV5 123 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 DNAJC30Q96LL9 226 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 CARD19Q96LW7 228 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 UBE2D4Q9Y2X8 147 aa12.76□□□□□ -0.37
SNAPC3-207ENST00000610884 TRBV6-4A0A1B0GX49 114 aa12.75□□□□□ -0.37
SNAPC3-207ENST00000610884 LINC00612Q8N6U2 182 aa12.75□□□□□ -0.37
SNAPC3-207ENST00000610884 TRBV20-1A0A075B6N2 111 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 TRAV26-1A0A087WT03 109 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 TMEM223A0PJW6 202 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 A4D1N5 150 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 MIFP14174 115 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 H7C2G1 150 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 K7EIL1 84 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 CRYBA4P53673 196 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 PPDPFLQ8WWR9 84 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 VSIG2Q96IQ7 327 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 VCX2Q9H322 139 aa12.74□□□□□ -0.37
SNAPC3-207ENST00000610884 IGKV3OR2-268A0A0C4DH90 116 aa12.73□□□□□ -0.37
SNAPC3-207ENST00000610884 TRBV10-1A0A0K0K1A3 114 aa12.73□□□□□ -0.37
SNAPC3-207ENST00000610884 CKS1BP61024 79 aa12.73□□□□□ -0.37
SNAPC3-207ENST00000610884 LEPROTO15243 131 aa12.73□□□□□ -0.37
SNAPC3-207ENST00000610884 MT-ATP8P03928 68 aa12.73□□□□□ -0.37
SNAPC3-207ENST00000610884 ZNF22P17026 224 aaPredicted RBP12.73□□□□□ -0.37
SNAPC3-207ENST00000610884 EIF4EBP3O60516 100 aaPredicted RBP12.72□□□□□ -0.37
SNAPC3-207ENST00000610884 GAGE6Q13070 117 aa12.72□□□□□ -0.37
SNAPC3-207ENST00000610884 ANKRD29Q8N6D5 301 aa12.72□□□□□ -0.37
SNAPC3-207ENST00000610884 PAX4O43316 350 aa12.72□□□□□ -0.37
SNAPC3-207ENST00000610884 SPINK8P0C7L1 97 aa12.72□□□□□ -0.37
SNAPC3-207ENST00000610884 A0A0J9YWU9 116 aa12.71□□□□□ -0.37
SNAPC3-207ENST00000610884 LYRM9A8MSI8 78 aa12.71□□□□□ -0.37
SNAPC3-207ENST00000610884 SPART-AS1P0CW21 52 aa12.71□□□□□ -0.37
SNAPC3-207ENST00000610884 XGP55808 180 aa12.71□□□□□ -0.37
SNAPC3-207ENST00000610884 Q8N3U1 123 aa12.71□□□□□ -0.37
SNAPC3-207ENST00000610884 DAZ4Q86SG3 579 aaKnown RBP12.71□□□□□ -0.37
SNAPC3-207ENST00000610884 DAZ3Q9NR90 486 aaKnown RBP12.71□□□□□ -0.37
SNAPC3-207ENST00000610884 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
SNAPC3-207ENST00000610884 MUSTN1Q8IVN3 82 aa12.7□□□□□ -0.38
SNAPC3-207ENST00000610884 PRO0255Q9UI72 69 aa12.7□□□□□ -0.38
SNAPC3-207ENST00000610884 A8MZ25 164 aa12.69□□□□□ -0.38
SNAPC3-207ENST00000610884 IGHV3-33P01772 117 aa12.69□□□□□ -0.38
SNAPC3-207ENST00000610884 STAB2Q8WWQ8 2551 aa12.69□□□□□ -0.38
SNAPC3-207ENST00000610884 C9JAW5 83 aa12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 NANOS2P60321 138 aaKnown RBP12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 Q6ZTC4 211 aa12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 CHCHD5Q9BSY4 110 aa12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 TRAV13-1A0A0B4J241 112 aa12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 SLC25A20O43772 301 aa12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 Q1RN00 199 aa12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 ERG28Q9UKR5 140 aa12.68□□□□□ -0.38
SNAPC3-207ENST00000610884 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
SNAPC3-207ENST00000610884 ATP5G1P05496 136 aa12.67□□□□□ -0.38
SNAPC3-207ENST00000610884 HUWE1Q7Z6Z7 4374 aaKnown RBP12.66□□□□□ -0.38
SNAPC3-207ENST00000610884 A0A0B4J2C4 111 aa12.66□□□□□ -0.38
SNAPC3-207ENST00000610884 A0A0J9YXY3 114 aa12.66□□□□□ -0.38
SNAPC3-207ENST00000610884 COX6A2Q02221 97 aa12.66□□□□□ -0.38
SNAPC3-207ENST00000610884 TRBV6-8A0A0A6YYG3 113 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 TRAV8-3A0A0A6YYJ7 113 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 TMEM262E9PQX1 116 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 UBE2L6O14933 153 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 CLPSL2Q6UWE3 100 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 TMEM243Q9BU79 118 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 IGHV3-30-3P0DP02 117 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 TIMM21Q9BVV7 248 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 GEMIN7Q9H840 131 aaKnown RBP12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 PYGO1Q9Y3Y4 419 aa12.65□□□□□ -0.38
SNAPC3-207ENST00000610884 LYSTQ99698 3801 aa12.63□□□□□ -0.39
SNAPC3-207ENST00000610884 TENM2Q9NT68 2774 aa12.63□□□□□ -0.39
SNAPC3-207ENST00000610884 MEGF8Q7Z7M0 2845 aa12.62□□□□□ -0.39
SNAPC3-207ENST00000610884 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.62□□□□□ -0.39
SNAPC3-207ENST00000610884 SPANXA1Q9NS26 97 aa12.62□□□□□ -0.39
SNAPC3-207ENST00000610884 CDC42SE2Q9NRR3 84 aa12.61□□□□□ -0.39
SNAPC3-207ENST00000610884 PRSS2P07478 247 aa12.61□□□□□ -0.39
SNAPC3-207ENST00000610884 NPC2P61916 151 aa12.6□□□□□ -0.39
SNAPC3-207ENST00000610884 LITAFQ99732 161 aa12.6□□□□□ -0.39
SNAPC3-207ENST00000610884 CDKN2A-AS1Q9UH64 79 aa12.6□□□□□ -0.39
SNAPC3-207ENST00000610884 MRPS36P82909 103 aaKnown RBP12.6□□□□□ -0.39
SNAPC3-207ENST00000610884 TRIAP1O43715 76 aa12.59□□□□□ -0.39
SNAPC3-207ENST00000610884 ATXN8Q156A1 80 aa12.59□□□□□ -0.39
SNAPC3-207ENST00000610884 NTN5Q8WTR8 489 aaPredicted RBP12.59□□□□□ -0.39
SNAPC3-207ENST00000610884 LINC01620Q4KN68 170 aa12.59□□□□□ -0.39
SNAPC3-207ENST00000610884 ADAMTSL4-AS1Q5T5F5 129 aa12.58□□□□□ -0.4
SNAPC3-207ENST00000610884 LINC00242Q5T6M2 205 aa12.57□□□□□ -0.4
SNAPC3-207ENST00000610884 NDUFA12Q9UI09 145 aa12.57□□□□□ -0.4
SNAPC3-207ENST00000610884 IGHV1-58A0A0C4DH39 117 aa12.57□□□□□ -0.4
SNAPC3-207ENST00000610884 C11orf45Q8TAV5 145 aa12.57□□□□□ -0.4
SNAPC3-207ENST00000610884 M0QXV9 152 aa12.56□□□□□ -0.4
SNAPC3-207ENST00000610884 TMEM101Q96IK0 257 aa12.55□□□□□ -0.4
SNAPC3-207ENST00000610884 CSMD3Q7Z407 3707 aa12.55□□□□□ -0.4
SNAPC3-207ENST00000610884 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
SNAPC3-207ENST00000610884 TEX49A0A1B0GTD5 131 aa12.54□□□□□ -0.4
SNAPC3-207ENST00000610884 KPRPQ5T749 579 aaPredicted RBP12.54□□□□□ -0.4
SNAPC3-207ENST00000610884 ICOSQ9Y6W8 199 aa12.54□□□□□ -0.4
SNAPC3-207ENST00000610884 PRKDCP78527 4128 aaKnown RBP12.54□□□□□ -0.4
SNAPC3-207ENST00000610884 IGLV10-54A0A075B6I4 117 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms