RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 TMEM243Q9BU79 118 aa7.01□□□□□ -1.29
TPM1-233ENST00000610733 V9GYY9 64 aa7.01□□□□□ -1.29
TPM1-233ENST00000610733 LINC00315P59091 139 aa7.01□□□□□ -1.29
TPM1-233ENST00000610733 RBMY1A1P0DJD3 496 aaKnown RBP7.01□□□□□ -1.29
TPM1-233ENST00000610733 RBMY1CP0DJD4 496 aa7.01□□□□□ -1.29
TPM1-233ENST00000610733 HERVK_113P63121 156 aa7.01□□□□□ -1.29
TPM1-233ENST00000610733 RBMY1FQ15415 496 aaKnown RBP7.01□□□□□ -1.29
TPM1-233ENST00000610733 MAP6D1Q9H9H5 199 aa7.01□□□□□ -1.29
TPM1-233ENST00000610733 PSMB8P28062 276 aa7□□□□□ -1.29
TPM1-233ENST00000610733 KRTAP10-9P60411 292 aa7□□□□□ -1.29
TPM1-233ENST00000610733 COX6A2Q02221 97 aa7□□□□□ -1.29
TPM1-233ENST00000610733 TMEM263Q8WUH6 116 aaKnown RBP7□□□□□ -1.29
TPM1-233ENST00000610733 MXRA5Q9NR99 2828 aa7□□□□□ -1.29
TPM1-233ENST00000610733 EIF4EBP3O60516 100 aaPredicted RBP7□□□□□ -1.29
TPM1-233ENST00000610733 LINC00526Q96FQ7 95 aa7□□□□□ -1.29
TPM1-233ENST00000610733 SND1-IT1Q9HBX3 110 aa7□□□□□ -1.29
TPM1-233ENST00000610733 MIAQ16674 131 aa7□□□□□ -1.29
TPM1-233ENST00000610733 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
TPM1-233ENST00000610733 KIF25-AS1Q9Y6Z4 181 aa7□□□□□ -1.29
TPM1-233ENST00000610733 UBE2D3P61077 147 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 UBE2D2P62837 147 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
TPM1-233ENST00000610733 H3BUA1 57 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 K7EMT4 169 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 MAST4O15021 2626 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 J3QLI3 93 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 CCL24O00175 119 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 LECT2O14960 151 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 MED14OSP0DP75 135 aa6.99□□□□□ -1.29
TPM1-233ENST00000610733 NOTCH1P46531 2555 aa6.98□□□□□ -1.29
TPM1-233ENST00000610733 H7C423 109 aa6.98□□□□□ -1.29
TPM1-233ENST00000610733 DAZ2Q13117 558 aaKnown RBP6.98□□□□□ -1.29
TPM1-233ENST00000610733 DAZ4Q86SG3 579 aaKnown RBP6.98□□□□□ -1.29
TPM1-233ENST00000610733 DAZ3Q9NR90 486 aaKnown RBP6.98□□□□□ -1.29
TPM1-233ENST00000610733 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
TPM1-233ENST00000610733 C9orf85Q96MD7 179 aa6.98□□□□□ -1.29
TPM1-233ENST00000610733 IGLV1-40P01703 118 aa6.97□□□□□ -1.29
TPM1-233ENST00000610733 SDIM1Q6ZPB5 146 aa6.97□□□□□ -1.29
TPM1-233ENST00000610733 LAMTOR3Q9UHA4 124 aa6.97□□□□□ -1.29
TPM1-233ENST00000610733 C3orf22Q8N5N4 141 aa6.97□□□□□ -1.29
TPM1-233ENST00000610733 LINC00308Q8TCZ7 52 aa6.97□□□□□ -1.29
TPM1-233ENST00000610733 RBMY1BA6NDE4 496 aaKnown RBP6.97□□□□□ -1.29
TPM1-233ENST00000610733 RBMY1EA6NEQ0 496 aaKnown RBP6.97□□□□□ -1.29
TPM1-233ENST00000610733 UQCRQO14949 82 aa6.97□□□□□ -1.29
TPM1-233ENST00000610733 RBMY1DP0C7P1 496 aaKnown RBP6.97□□□□□ -1.29
TPM1-233ENST00000610733 COPS9Q8WXC6 57 aa6.96□□□□□ -1.29
TPM1-233ENST00000610733 ITPR2Q14571 2701 aa6.96□□□□□ -1.3
TPM1-233ENST00000610733 A0A0B4J2C4 111 aa6.96□□□□□ -1.3
TPM1-233ENST00000610733 ANGP03950 147 aaKnown RBP6.96□□□□□ -1.3
TPM1-233ENST00000610733 HRCT1Q6UXD1 115 aa6.96□□□□□ -1.3
TPM1-233ENST00000610733 UBE2D4Q9Y2X8 147 aa6.96□□□□□ -1.3
TPM1-233ENST00000610733 PRR3P79522 188 aaKnown RBP6.95□□□□□ -1.3
TPM1-233ENST00000610733 TMEM86BQ8N661 226 aa6.95□□□□□ -1.3
TPM1-233ENST00000610733 K7EQD1 137 aa6.95□□□□□ -1.3
TPM1-233ENST00000610733 PRO0628Q9UI54 55 aa6.95□□□□□ -1.3
TPM1-233ENST00000610733 NCR3O14931 201 aa6.94□□□□□ -1.3
TPM1-233ENST00000610733 GYPEP15421 78 aa6.94□□□□□ -1.3
TPM1-233ENST00000610733 Q8N2B8 174 aa6.94□□□□□ -1.3
TPM1-233ENST00000610733 TRBV6-5A0A0K0K1A5 114 aa6.94□□□□□ -1.3
TPM1-233ENST00000610733 HAMPP81172 84 aa6.94□□□□□ -1.3
TPM1-233ENST00000610733 TRACP01848 142 aa6.94□□□□□ -1.3
TPM1-233ENST00000610733 PKIGQ9Y2B9 76 aa6.94□□□□□ -1.3
TPM1-233ENST00000610733 DEFB114Q30KQ6 69 aa6.93□□□□□ -1.3
TPM1-233ENST00000610733 WFDC9Q8NEX5 89 aa6.93□□□□□ -1.3
TPM1-233ENST00000610733 COX7B2Q8TF08 81 aa6.93□□□□□ -1.3
TPM1-233ENST00000610733 LINC00242Q5T6M2 205 aa6.93□□□□□ -1.3
TPM1-233ENST00000610733 ZNF702PQ9H963 129 aa6.93□□□□□ -1.3
TPM1-233ENST00000610733 J3QKU1 62 aa6.92□□□□□ -1.3
TPM1-233ENST00000610733 KLK5Q9Y337 293 aaPredicted RBP6.92□□□□□ -1.3
TPM1-233ENST00000610733 DSCR9P59020 149 aa6.92□□□□□ -1.3
TPM1-233ENST00000610733 LINC00482Q8N8I6 264 aa6.92□□□□□ -1.3
TPM1-233ENST00000610733 CHCHD7Q9BUK0 85 aa6.92□□□□□ -1.3
TPM1-233ENST00000610733 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
TPM1-233ENST00000610733 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
TPM1-233ENST00000610733 APCP25054 2843 aa6.92□□□□□ -1.3
TPM1-233ENST00000610733 A0A087WVE0 104 aa6.91□□□□□ -1.3
TPM1-233ENST00000610733 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.91□□□□□ -1.3
TPM1-233ENST00000610733 HIVEP1P15822 2718 aa6.91□□□□□ -1.3
TPM1-233ENST00000610733 LINC01546A6NGU7 62 aa6.91□□□□□ -1.3
TPM1-233ENST00000610733 DEFB135Q30KP9 77 aa6.91□□□□□ -1.3
TPM1-233ENST00000610733 H3BT86 120 aa6.91□□□□□ -1.3
TPM1-233ENST00000610733 SS18Q15532 418 aa6.91□□□□□ -1.3
TPM1-233ENST00000610733 ODF3L2Q3SX64 289 aa6.91□□□□□ -1.3
TPM1-233ENST00000610733 LST1O00453 97 aa6.9□□□□□ -1.3
TPM1-233ENST00000610733 COX7A2LO14548 114 aa6.9□□□□□ -1.31
TPM1-233ENST00000610733 IGLV4-60A0A075B6I1 120 aa6.89□□□□□ -1.31
TPM1-233ENST00000610733 TRAV13-2A0A0B4J235 113 aa6.89□□□□□ -1.31
TPM1-233ENST00000610733 IGHV4-31P0DP07 118 aa6.89□□□□□ -1.31
TPM1-233ENST00000610733 C4orf26Q17RF5 130 aa6.89□□□□□ -1.31
TPM1-233ENST00000610733 C9orf116Q5BN46 136 aaPredicted RBP6.89□□□□□ -1.31
TPM1-233ENST00000610733 INAFM2P0DMQ5 153 aa6.89□□□□□ -1.31
TPM1-233ENST00000610733 DNAJC9-AS1A6NH13 148 aa6.89□□□□□ -1.31
TPM1-233ENST00000610733 LINC00269Q8N2A0 174 aa6.89□□□□□ -1.31
TPM1-233ENST00000610733 TRAV23DV6A0A075B6W5 121 aa6.88□□□□□ -1.31
TPM1-233ENST00000610733 TMEM89A2RUT3 159 aa6.88□□□□□ -1.31
TPM1-233ENST00000610733 A8MTW9 85 aa6.88□□□□□ -1.31
TPM1-233ENST00000610733 TIRAPP58753 221 aa6.88□□□□□ -1.31
TPM1-233ENST00000610733 AMELXQ99217 191 aa6.88□□□□□ -1.31
TPM1-233ENST00000610733 PRB2P02812 416 aaPredicted RBP6.88□□□□□ -1.31
TPM1-233ENST00000610733 Q6YL49 198 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms