RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
HDDC2-210ENST00000609574 SMDT1Q9H4I9 107 aa9.49□□□□□ -0.89
HDDC2-210ENST00000609574 KRTAP1-4P0C5Y4 121 aa9.48□□□□□ -0.89
HDDC2-210ENST00000609574 HBBP68871 147 aa9.48□□□□□ -0.89
HDDC2-210ENST00000609574 BLOC1S1P78537 153 aa9.48□□□□□ -0.89
HDDC2-210ENST00000609574 PACRGQ96M98 296 aaPredicted RBP9.48□□□□□ -0.89
HDDC2-210ENST00000609574 C20orf78Q9BR46 151 aa9.48□□□□□ -0.89
HDDC2-210ENST00000609574 IGHV3OR16-9A0A0B4J2B5 98 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 IFITM10A6NMD0 228 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 C10orf25Q5T742 122 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 KRTAP11-1Q8IUC1 163 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 NRACQ8N912 160 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 SMIM7Q9BQ49 75 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 OSTCQ9NRP0 149 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
HDDC2-210ENST00000609574 LINC00862A6NCI5 91 aa9.46□□□□□ -0.9
HDDC2-210ENST00000609574 TSPAN13O95857 204 aa9.46□□□□□ -0.9
HDDC2-210ENST00000609574 CKS2P33552 79 aa9.46□□□□□ -0.9
HDDC2-210ENST00000609574 TRBV30A0A0K0K1B3 111 aa9.45□□□□□ -0.9
HDDC2-210ENST00000609574 ZNF861PO60384 105 aa9.45□□□□□ -0.9
HDDC2-210ENST00000609574 EIF5A2Q9GZV4 153 aaKnown RBP9.45□□□□□ -0.9
HDDC2-210ENST00000609574 ZNF727A8MUV8 499 aa9.44□□□□□ -0.9
HDDC2-210ENST00000609574 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
HDDC2-210ENST00000609574 MRPS36P82909 103 aaKnown RBP9.44□□□□□ -0.9
HDDC2-210ENST00000609574 MRPL51Q4U2R6 128 aaKnown RBP9.44□□□□□ -0.9
HDDC2-210ENST00000609574 LBHQ53QV2 105 aaPredicted RBP9.44□□□□□ -0.9
HDDC2-210ENST00000609574 FAM104BQ5XKR9 115 aa9.44□□□□□ -0.9
HDDC2-210ENST00000609574 LINC01551Q86U37 167 aa9.44□□□□□ -0.9
HDDC2-210ENST00000609574 NAT8BQ9UHF3 227 aa9.44□□□□□ -0.9
HDDC2-210ENST00000609574 NDUFC2-KCTD14E9PQ53 114 aa9.43□□□□□ -0.9
HDDC2-210ENST00000609574 RPL32P62910 135 aaKnown RBP9.43□□□□□ -0.9
HDDC2-210ENST00000609574 NUPR1O60356 82 aa9.42□□□□□ -0.9
HDDC2-210ENST00000609574 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
HDDC2-210ENST00000609574 A0A1B0GW15 77 aa9.41□□□□□ -0.9
HDDC2-210ENST00000609574 PRSS2P07478 247 aa9.41□□□□□ -0.9
HDDC2-210ENST00000609574 RAB5AP20339 215 aa9.41□□□□□ -0.9
HDDC2-210ENST00000609574 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
HDDC2-210ENST00000609574 TNFRSF6BO95407 300 aa9.4□□□□□ -0.9
HDDC2-210ENST00000609574 SMIM2Q9BVW6 85 aa9.4□□□□□ -0.9
HDDC2-210ENST00000609574 F8W036 122 aa9.39□□□□□ -0.91
HDDC2-210ENST00000609574 S100A8P05109 93 aa9.39□□□□□ -0.91
HDDC2-210ENST00000609574 CRYGAP11844 174 aa9.39□□□□□ -0.91
HDDC2-210ENST00000609574 RPL28P46779 137 aaKnown RBP9.39□□□□□ -0.91
HDDC2-210ENST00000609574 CKS1BP61024 79 aa9.39□□□□□ -0.91
HDDC2-210ENST00000609574 TCTE3Q8IZS6 198 aa9.39□□□□□ -0.91
HDDC2-210ENST00000609574 TYMSOSQ8TAI1 123 aa9.39□□□□□ -0.91
HDDC2-210ENST00000609574 V9GYV3 84 aa9.39□□□□□ -0.91
HDDC2-210ENST00000609574 KIAA0087Q14695 138 aa9.38□□□□□ -0.91
HDDC2-210ENST00000609574 C9orf129Q5T035 196 aaKnown RBP9.38□□□□□ -0.91
HDDC2-210ENST00000609574 KRTAP7-1Q8IUC3 87 aa9.38□□□□□ -0.91
HDDC2-210ENST00000609574 FAM74A3Q4VXF1 159 aa9.37□□□□□ -0.91
HDDC2-210ENST00000609574 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
HDDC2-210ENST00000609574 C2orf82Q6UX34 121 aa9.37□□□□□ -0.91
HDDC2-210ENST00000609574 LINC01561Q8N1V8 128 aa9.37□□□□□ -0.91
HDDC2-210ENST00000609574 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
HDDC2-210ENST00000609574 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
HDDC2-210ENST00000609574 C22orf24Q9Y442 160 aa9.37□□□□□ -0.91
HDDC2-210ENST00000609574 PPBPP02775 128 aa9.36□□□□□ -0.91
HDDC2-210ENST00000609574 ALKAL2Q6UX46 152 aa9.36□□□□□ -0.91
HDDC2-210ENST00000609574 D6R8Y8 96 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 LINC00242Q5T6M2 205 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 Q6ZN92 141 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 FAM104AQ969W3 186 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 TMEM141Q96I45 108 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 TOMM7Q9P0U1 55 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 PYGO1Q9Y3Y4 419 aa9.35□□□□□ -0.91
HDDC2-210ENST00000609574 KRTAP9-6A0A140TA67 174 aa9.33□□□□□ -0.92
HDDC2-210ENST00000609574 SMIM27A0A1W2PRY6 76 aa9.33□□□□□ -0.92
HDDC2-210ENST00000609574 SRP19P09132 144 aaKnown RBP9.33□□□□□ -0.92
HDDC2-210ENST00000609574 ADIRFQ15847 76 aa9.33□□□□□ -0.92
HDDC2-210ENST00000609574 LINC00469Q8N7U9 141 aa9.33□□□□□ -0.92
HDDC2-210ENST00000609574 CDIP1Q9H305 208 aa9.33□□□□□ -0.92
HDDC2-210ENST00000609574 BCE1O60756 84 aa9.32□□□□□ -0.92
HDDC2-210ENST00000609574 FAT4Q6V0I7 4981 aa9.32□□□□□ -0.92
HDDC2-210ENST00000609574 IGLV4-3A0A075B6K6 122 aa9.31□□□□□ -0.92
HDDC2-210ENST00000609574 NPYP01303 97 aa9.31□□□□□ -0.92
HDDC2-210ENST00000609574 MRPL55Q7Z7F7 128 aaKnown RBP9.31□□□□□ -0.92
HDDC2-210ENST00000609574 ORMDL3Q8N138 153 aa9.31□□□□□ -0.92
HDDC2-210ENST00000609574 ALKBH7Q9BT30 221 aaPredicted RBP9.31□□□□□ -0.92
HDDC2-210ENST00000609574 VCX2Q9H322 139 aa9.31□□□□□ -0.92
HDDC2-210ENST00000609574 XAGE1AQ9HD64 81 aa9.31□□□□□ -0.92
HDDC2-210ENST00000609574 TP73-AS1Q9UF72 201 aa9.31□□□□□ -0.92
HDDC2-210ENST00000609574 RPL23P62829 140 aaKnown RBP9.3□□□□□ -0.92
HDDC2-210ENST00000609574 LCE2AQ5TA79 106 aaPredicted RBP9.3□□□□□ -0.92
HDDC2-210ENST00000609574 MRPL54Q6P161 138 aaKnown RBP9.3□□□□□ -0.92
HDDC2-210ENST00000609574 TMEM136Q6ZRR5 245 aa9.3□□□□□ -0.92
HDDC2-210ENST00000609574 A0A087X002 238 aa9.29□□□□□ -0.92
HDDC2-210ENST00000609574 NAT8Q9UHE5 227 aa9.29□□□□□ -0.92
HDDC2-210ENST00000609574 Q8IZM0 81 aa9.28□□□□□ -0.92
HDDC2-210ENST00000609574 PRELID3AQ96N28 172 aa9.28□□□□□ -0.92
HDDC2-210ENST00000609574 CYSLTR1Q9Y271 337 aa9.28□□□□□ -0.92
HDDC2-210ENST00000609574 UBE2AP49459 152 aa9.27□□□□□ -0.93
HDDC2-210ENST00000609574 SEC11AP67812 179 aa9.27□□□□□ -0.93
HDDC2-210ENST00000609574 LOC389332A0A1B0GUA5 103 aa9.26□□□□□ -0.93
HDDC2-210ENST00000609574 F8VRH5 84 aa9.26□□□□□ -0.93
HDDC2-210ENST00000609574 LINC00304Q8N9R0 145 aa9.26□□□□□ -0.93
HDDC2-210ENST00000609574 IGKV2D-26A0A0A0MRZ7 120 aa9.25□□□□□ -0.93
HDDC2-210ENST00000609574 RPL37AP8A6NKH3 93 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms