RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 PLAC8Q9NZF1 115 aa15.13■□□□□ 0.01
SSX2IP-209ENST00000603677 IGHV3OR16-9A0A0B4J2B5 98 aa15.12■□□□□ 0.01
SSX2IP-209ENST00000603677 MT-ND6P03923 174 aa15.12■□□□□ 0.01
SSX2IP-209ENST00000603677 IFITM10A6NMD0 228 aa15.11■□□□□ 0.01
SSX2IP-209ENST00000603677 PANO1I0J062 215 aa15.11■□□□□ 0.01
SSX2IP-209ENST00000603677 C2orf66Q6UXQ4 117 aa15.11■□□□□ 0.01
SSX2IP-209ENST00000603677 FLG2Q5D862 2391 aaPredicted RBP15.1■□□□□ 0.01
SSX2IP-209ENST00000603677 IGLV4-69A0A075B6H9 119 aa15.1■□□□□ 0.01
SSX2IP-209ENST00000603677 A0A087WYN8 130 aa15.1■□□□□ 0.01
SSX2IP-209ENST00000603677 KRTAP10-4P60372 401 aaPredicted RBP15.1■□□□□ 0.01
SSX2IP-209ENST00000603677 PAPPA-AS1Q5QFB9 102 aa15.1■□□□□ 0.01
SSX2IP-209ENST00000603677 Q6ZN92 141 aa15.1■□□□□ 0.01
SSX2IP-209ENST00000603677 PRSS3P2Q8NHM4 247 aa15.1■□□□□ 0.01
SSX2IP-209ENST00000603677 IGLV4-3A0A075B6K6 122 aa15.09■□□□□ 0.01
SSX2IP-209ENST00000603677 RPL37AP61513 92 aaKnown RBP15.09■□□□□ 0.01
SSX2IP-209ENST00000603677 TEX43Q6ZNM6 134 aa15.09■□□□□ 0.01
SSX2IP-209ENST00000603677 C2orf88Q9BSF0 95 aa15.09■□□□□ 0.01
SSX2IP-209ENST00000603677 DMBT1Q9UGM3 2413 aaPredicted RBP15.08■□□□□ 0.01
SSX2IP-209ENST00000603677 TGIF2-C20orf24A0A0A6YYL0 155 aa15.08■□□□□ 0
SSX2IP-209ENST00000603677 RNF151Q2KHN1 245 aa15.08■□□□□ 0
SSX2IP-209ENST00000603677 C5orf38Q86SI9 138 aa15.08■□□□□ 0
SSX2IP-209ENST00000603677 LINC01561Q8N1V8 128 aa15.07■□□□□ 0
SSX2IP-209ENST00000603677 OPRPNQ99935 248 aaPredicted RBP15.07■□□□□ 0
SSX2IP-209ENST00000603677 CAMK2N2Q96S95 79 aa15.06■□□□□ 0
SSX2IP-209ENST00000603677 RPS10P5Q9NQ39 176 aa15.06■□□□□ 0
SSX2IP-209ENST00000603677 LOC107984640A0A0U1RRK4 108 aa15.05■□□□□ -0
SSX2IP-209ENST00000603677 IGIPA6NJ69 53 aa15.05■□□□□ -0
SSX2IP-209ENST00000603677 CHTF8P0CG12 524 aa15.05■□□□□ -0
SSX2IP-209ENST00000603677 NDUFA5Q16718 116 aa15.05■□□□□ -0
SSX2IP-209ENST00000603677 AMELXQ99217 191 aa15.05■□□□□ -0
SSX2IP-209ENST00000603677 VCX2Q9H322 139 aa15.05■□□□□ -0
SSX2IP-209ENST00000603677 A0A087WZ39 114 aa15.04■□□□□ -0
SSX2IP-209ENST00000603677 SEC11AP67812 179 aa15.04■□□□□ -0
SSX2IP-209ENST00000603677 MAJINQ3KP22 176 aa15.04■□□□□ -0
SSX2IP-209ENST00000603677 TIMM17AQ99595 171 aa15.04■□□□□ -0
SSX2IP-209ENST00000603677 SPAG11BQ08648 103 aa15.03■□□□□ -0
SSX2IP-209ENST00000603677 LINC00242Q5T6M2 205 aa15.03■□□□□ -0
SSX2IP-209ENST00000603677 FAM19A3Q7Z5A8 133 aa15.03■□□□□ -0
SSX2IP-209ENST00000603677 C7orf33Q8WU49 177 aa15.03■□□□□ -0
SSX2IP-209ENST00000603677 LINC00526Q96FQ7 95 aa15.03■□□□□ -0
SSX2IP-209ENST00000603677 A0A096LNI7 61 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 LINC01546A6NGU7 62 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 KRTAP29-1A8MX34 341 aaPredicted RBP15.02■□□□□ -0
SSX2IP-209ENST00000603677 SNAPINO95295 136 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 UBE2D1P51668 147 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 KIAA1644Q3SXP7 199 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 Q6ZRU5 148 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 SVBPQ8N300 66 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 TOMM6Q96B49 74 aa15.02■□□□□ -0
SSX2IP-209ENST00000603677 ALKBH7Q9BT30 221 aaPredicted RBP15.02■□□□□ -0
SSX2IP-209ENST00000603677 MRPL35Q9NZE8 188 aaKnown RBP15.02■□□□□ -0
SSX2IP-209ENST00000603677 MYCBP2O75592 4640 aa15.01□□□□□ -0.01
SSX2IP-209ENST00000603677 IGKV2-24A0A0C4DH68 120 aa15.01□□□□□ -0.01
SSX2IP-209ENST00000603677 STPG4Q8N801 248 aa15.01□□□□□ -0.01
SSX2IP-209ENST00000603677 ORAOV1Q8WV07 137 aa15.01□□□□□ -0.01
SSX2IP-209ENST00000603677 ERASQ7Z444 233 aa15□□□□□ -0.01
SSX2IP-209ENST00000603677 NDUFA1O15239 70 aa14.99□□□□□ -0.01
SSX2IP-209ENST00000603677 PTTG1IPP53801 180 aa14.99□□□□□ -0.01
SSX2IP-209ENST00000603677 MRPL18Q9H0U6 180 aaKnown RBP14.99□□□□□ -0.01
SSX2IP-209ENST00000603677 OXTP01178 125 aa14.98□□□□□ -0.01
SSX2IP-209ENST00000603677 APOC3P02656 99 aa14.97□□□□□ -0.01
SSX2IP-209ENST00000603677 FABP9Q0Z7S8 132 aa14.97□□□□□ -0.01
SSX2IP-209ENST00000603677 LINC00173Q6ZV60 143 aa14.97□□□□□ -0.01
SSX2IP-209ENST00000603677 TLX1NBP0CAT3 122 aa14.95□□□□□ -0.02
SSX2IP-209ENST00000603677 HERVK_113P63121 156 aa14.95□□□□□ -0.02
SSX2IP-209ENST00000603677 J3QL48 77 aa14.94□□□□□ -0.02
SSX2IP-209ENST00000603677 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.93□□□□□ -0.02
SSX2IP-209ENST00000603677 SCGB3A1Q96QR1 104 aa14.93□□□□□ -0.02
SSX2IP-209ENST00000603677 SMCO4Q9NRQ5 59 aa14.93□□□□□ -0.02
SSX2IP-209ENST00000603677 TRBV30A0A0K0K1B3 111 aa14.92□□□□□ -0.02
SSX2IP-209ENST00000603677 KIAA0087Q14695 138 aa14.92□□□□□ -0.02
SSX2IP-209ENST00000603677 FA2HQ7L5A8 372 aa14.92□□□□□ -0.02
SSX2IP-209ENST00000603677 GAGE2BQ13066 116 aa14.91□□□□□ -0.02
SSX2IP-209ENST00000603677 TRAPPC1Q9Y5R8 145 aa14.91□□□□□ -0.02
SSX2IP-209ENST00000603677 GEMIN7Q9H840 131 aaKnown RBP14.89□□□□□ -0.03
SSX2IP-209ENST00000603677 PRSS2P07478 247 aa14.87□□□□□ -0.03
SSX2IP-209ENST00000603677 RPL18AQ02543 176 aaKnown RBP14.87□□□□□ -0.03
SSX2IP-209ENST00000603677 Q8IZM0 81 aa14.87□□□□□ -0.03
SSX2IP-209ENST00000603677 RAB5BP61020 215 aa14.86□□□□□ -0.03
SSX2IP-209ENST00000603677 UNQ6190/PRO20217Q6UXQ8 127 aa14.86□□□□□ -0.03
SSX2IP-209ENST00000603677 PACRGQ96M98 296 aaPredicted RBP14.86□□□□□ -0.03
SSX2IP-209ENST00000603677 TINCRA0A1B0GVN0 87 aa14.85□□□□□ -0.03
SSX2IP-209ENST00000603677 LINC00614P0C842 121 aa14.85□□□□□ -0.03
SSX2IP-209ENST00000603677 ZC2HC1BQ5TFG8 222 aa14.85□□□□□ -0.03
SSX2IP-209ENST00000603677 C6orf48Q9UBA6 75 aa14.85□□□□□ -0.03
SSX2IP-209ENST00000603677 PMVKQ15126 192 aa14.84□□□□□ -0.03
SSX2IP-209ENST00000603677 C18orf32Q8TCD1 76 aa14.84□□□□□ -0.03
SSX2IP-209ENST00000603677 CXCL5P42830 114 aa14.83□□□□□ -0.04
SSX2IP-209ENST00000603677 PRR3P79522 188 aaKnown RBP14.83□□□□□ -0.04
SSX2IP-209ENST00000603677 C6orf226Q5I0X4 101 aa14.83□□□□□ -0.04
SSX2IP-209ENST00000603677 C10orf25Q5T742 122 aa14.83□□□□□ -0.04
SSX2IP-209ENST00000603677 Q6ZRP5 223 aa14.83□□□□□ -0.04
SSX2IP-209ENST00000603677 CDKN2A-AS1Q9UH64 79 aa14.83□□□□□ -0.04
SSX2IP-209ENST00000603677 IGLV5-45A0A087WSX0 123 aa14.82□□□□□ -0.04
SSX2IP-209ENST00000603677 A0A0J9YXV3 536 aa14.82□□□□□ -0.04
SSX2IP-209ENST00000603677 HNRNPA3P51991 378 aaKnown RBP14.82□□□□□ -0.04
SSX2IP-209ENST00000603677 CKS1BP61024 79 aa14.82□□□□□ -0.04
SSX2IP-209ENST00000603677 C9orf116Q5BN46 136 aaPredicted RBP14.82□□□□□ -0.04
SSX2IP-209ENST00000603677 CST9LQ9H4G1 147 aa14.82□□□□□ -0.04
SSX2IP-209ENST00000603677 NDUFC2-KCTD14E9PQ53 114 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms