RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CENPEQ02224 2701 aa7.15□□□□□ -1.27
CSMD1-217ENST00000602723 TNFRSF13BO14836 293 aaPredicted RBP7.14□□□□□ -1.27
CSMD1-217ENST00000602723 IGLV2-11P01706 119 aa7.14□□□□□ -1.27
CSMD1-217ENST00000602723 TSHBP01222 138 aa7.14□□□□□ -1.27
CSMD1-217ENST00000602723 BRWD1-AS2P59051 145 aa7.14□□□□□ -1.27
CSMD1-217ENST00000602723 Q8N9L7 120 aa7.14□□□□□ -1.27
CSMD1-217ENST00000602723 SYCNQ0VAF6 134 aa7.14□□□□□ -1.27
CSMD1-217ENST00000602723 Q6ZQY7 126 aa7.14□□□□□ -1.27
CSMD1-217ENST00000602723 HILS1P60008 231 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 EIF4EBP1Q13541 118 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-217ENST00000602723 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 MRPS36P82909 103 aaKnown RBP7.13□□□□□ -1.27
CSMD1-217ENST00000602723 PYGO1Q9Y3Y4 419 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 CD164L2Q6UWJ8 174 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 SPINK6Q6UWN8 80 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 COX17Q14061 63 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 XGP55808 180 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 C22orf34Q6ZV56 151 aa7.13□□□□□ -1.27
CSMD1-217ENST00000602723 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.13□□□□□ -1.27
CSMD1-217ENST00000602723 MIFP14174 115 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 Q6ZPA2 131 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 SERP1Q9Y6X1 66 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 PCSK5Q92824 1860 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 HRCT1Q6UXD1 115 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 A8MZ25 164 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 LINC00694P0DN24 101 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 ZNF706Q9Y5V0 76 aaPredicted RBP7.12□□□□□ -1.27
CSMD1-217ENST00000602723 FBXL19-AS1Q494R0 122 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 Q8N976 141 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 C7orf33Q8WU49 177 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 FAM30AQ9NZY2 134 aa7.12□□□□□ -1.27
CSMD1-217ENST00000602723 IGHV4-30-4P0DP06 118 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 IGHV4-31P0DP07 118 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 LRRC75A-AS1Q8N1F1 130 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 PROK1P58294 105 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 SMIM11BQ8TCY0 68 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.11□□□□□ -1.27
CSMD1-217ENST00000602723 MGAM2Q2M2H8 2515 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 M0R378 163 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 Q6JHZ5 121 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 TRBV6-4A0A1B0GX49 114 aa7.11□□□□□ -1.27
CSMD1-217ENST00000602723 ZNF73O43830 326 aaPredicted RBP7.11□□□□□ -1.27
CSMD1-217ENST00000602723 LMO4P61968 165 aa7.1□□□□□ -1.27
CSMD1-217ENST00000602723 SMIM26A0A096LP01 95 aa7.1□□□□□ -1.27
CSMD1-217ENST00000602723 FLNBO75369 2602 aaKnown RBP7.1□□□□□ -1.27
CSMD1-217ENST00000602723 Q6YL49 198 aa7.09□□□□□ -1.27
CSMD1-217ENST00000602723 C1orf229Q6ZS94 237 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-217ENST00000602723 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
CSMD1-217ENST00000602723 LY6LH3BQJ8 138 aa7.09□□□□□ -1.27
CSMD1-217ENST00000602723 LINC00526Q96FQ7 95 aa7.09□□□□□ -1.27
CSMD1-217ENST00000602723 A0A1W2PNU3 283 aaPredicted RBP7.09□□□□□ -1.27
CSMD1-217ENST00000602723 UBE2D4Q9Y2X8 147 aa7.09□□□□□ -1.27
CSMD1-217ENST00000602723 UBE2D3P61077 147 aa7.09□□□□□ -1.28
CSMD1-217ENST00000602723 PMAIP1Q13794 54 aa7.09□□□□□ -1.28
CSMD1-217ENST00000602723 UBE2D1P51668 147 aa7.08□□□□□ -1.28
CSMD1-217ENST00000602723 Q6ZS46 218 aa7.08□□□□□ -1.28
CSMD1-217ENST00000602723 CLUHP3Q96NS8 147 aa7.08□□□□□ -1.28
CSMD1-217ENST00000602723 RPL37AP8A6NKH3 93 aa7.08□□□□□ -1.28
CSMD1-217ENST00000602723 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
CSMD1-217ENST00000602723 POM121L12Q8N7R1 296 aa7.08□□□□□ -1.28
CSMD1-217ENST00000602723 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
CSMD1-217ENST00000602723 Q8NA96 180 aa7.07□□□□□ -1.28
CSMD1-217ENST00000602723 CELA1Q9UNI1 258 aa7.07□□□□□ -1.28
CSMD1-217ENST00000602723 PRR9Q5T870 116 aa7.07□□□□□ -1.28
CSMD1-217ENST00000602723 BBC3Q96PG8 261 aaPredicted RBP7.07□□□□□ -1.28
CSMD1-217ENST00000602723 IGLV9-49A0A0B4J1Y8 123 aa7.07□□□□□ -1.28
CSMD1-217ENST00000602723 CRIP3Q6Q6R5 217 aa7.07□□□□□ -1.28
CSMD1-217ENST00000602723 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.07□□□□□ -1.28
CSMD1-217ENST00000602723 FSTL3O95633 263 aa7.06□□□□□ -1.28
CSMD1-217ENST00000602723 KLLNB2CW77 178 aa7.06□□□□□ -1.28
CSMD1-217ENST00000602723 Q6Q795 121 aa7.06□□□□□ -1.28
CSMD1-217ENST00000602723 KPRPQ5T749 579 aaPredicted RBP7.06□□□□□ -1.28
CSMD1-217ENST00000602723 M0QXV9 152 aa7.06□□□□□ -1.28
CSMD1-217ENST00000602723 LOC107984640A0A0U1RRK4 108 aa7.06□□□□□ -1.28
CSMD1-217ENST00000602723 EBI3Q14213 229 aa7.05□□□□□ -1.28
CSMD1-217ENST00000602723 LELP1Q5T871 98 aa7.05□□□□□ -1.28
CSMD1-217ENST00000602723 C10orf25Q5T742 122 aa7.05□□□□□ -1.28
CSMD1-217ENST00000602723 Q8IZM0 81 aa7.05□□□□□ -1.28
CSMD1-217ENST00000602723 NTM-AS1Q6ZSK4 140 aa7.05□□□□□ -1.28
CSMD1-217ENST00000602723 LINC00959A0A1B0GUT2 108 aa7.05□□□□□ -1.28
CSMD1-217ENST00000602723 CNFNQ9BYD5 112 aa7.05□□□□□ -1.28
CSMD1-217ENST00000602723 IGLV4-69A0A075B6H9 119 aa7.04□□□□□ -1.28
CSMD1-217ENST00000602723 LINC00482Q8N8I6 264 aa7.04□□□□□ -1.28
CSMD1-217ENST00000602723 TRAV10A0A0B4J240 114 aa7.04□□□□□ -1.28
CSMD1-217ENST00000602723 WFDC10AQ9H1F0 79 aa7.04□□□□□ -1.28
CSMD1-217ENST00000602723 WISP2O76076 250 aa7.04□□□□□ -1.28
CSMD1-217ENST00000602723 GAS8-AS1O95177 125 aa7.04□□□□□ -1.28
CSMD1-217ENST00000602723 Q8N814 137 aa7.04□□□□□ -1.28
CSMD1-217ENST00000602723 LOC100131303A0A0U1RQF7 123 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 MUC7Q8TAX7 377 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 LINC00474Q9P2X8 69 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 PLAC8L1A1L4L8 177 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 ESRGQ1W209 222 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 C10orf99Q6UWK7 81 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 POLR2KP53803 58 aaKnown RBP7.03□□□□□ -1.28
CSMD1-217ENST00000602723 Q6ZVQ6 151 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 SOSTDC1Q6X4U4 206 aa7.03□□□□□ -1.28
CSMD1-217ENST00000602723 C11orf21Q9P2W6 132 aa7.02□□□□□ -1.29
CSMD1-217ENST00000602723 TRBV7-6A0A0J9YX20 115 aa7.02□□□□□ -1.29
CSMD1-217ENST00000602723 PRYO14603 147 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms