RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 CIRBPQ14011 172 aaKnown RBP10.7□□□□□ -0.7
SSBP4-213ENST00000602088 LINC00528Q8N1L1 170 aa10.7□□□□□ -0.7
SSBP4-213ENST00000602088 TMEM141Q96I45 108 aa10.7□□□□□ -0.7
SSBP4-213ENST00000602088 IGHV3OR16-9A0A0B4J2B5 98 aa10.69□□□□□ -0.7
SSBP4-213ENST00000602088 PRSS3P2Q8NHM4 247 aa10.69□□□□□ -0.7
SSBP4-213ENST00000602088 IGIPA6NJ69 53 aa10.68□□□□□ -0.7
SSBP4-213ENST00000602088 NPSP0C0P6 89 aa10.68□□□□□ -0.7
SSBP4-213ENST00000602088 G0S2P27469 103 aa10.68□□□□□ -0.7
SSBP4-213ENST00000602088 COX6A2Q02221 97 aa10.68□□□□□ -0.7
SSBP4-213ENST00000602088 LINC01546A6NGU7 62 aa10.67□□□□□ -0.7
SSBP4-213ENST00000602088 APOMO95445 188 aa10.67□□□□□ -0.7
SSBP4-213ENST00000602088 INAFM2P0DMQ5 153 aa10.67□□□□□ -0.7
SSBP4-213ENST00000602088 SYCNQ0VAF6 134 aa10.67□□□□□ -0.7
SSBP4-213ENST00000602088 TEX43Q6ZNM6 134 aa10.67□□□□□ -0.7
SSBP4-213ENST00000602088 LINC00173Q6ZV60 143 aa10.67□□□□□ -0.7
SSBP4-213ENST00000602088 TOMM6Q96B49 74 aa10.67□□□□□ -0.7
SSBP4-213ENST00000602088 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
SSBP4-213ENST00000602088 PLA2G1BP04054 148 aaKnown RBP10.66□□□□□ -0.7
SSBP4-213ENST00000602088 CHTF8P0CG12 524 aa10.66□□□□□ -0.7
SSBP4-213ENST00000602088 LINC00242Q5T6M2 205 aa10.66□□□□□ -0.7
SSBP4-213ENST00000602088 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
SSBP4-213ENST00000602088 AMELXQ99217 191 aa10.66□□□□□ -0.7
SSBP4-213ENST00000602088 UBE2D1P51668 147 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 ZC2HC1BQ5TFG8 222 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 Q6ZN92 141 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 OR10D4PQ8NGN7 298 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 SPACA4Q8TDM5 124 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 DPH3Q96FX2 82 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 C2orf48Q96LS8 159 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 C2orf88Q9BSF0 95 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 VCX2Q9H322 139 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 TRAPPC1Q9Y5R8 145 aa10.65□□□□□ -0.7
SSBP4-213ENST00000602088 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
SSBP4-213ENST00000602088 A0A087WYN8 130 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 A0A087WZ39 114 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 SPAG11BQ08648 103 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 PAPPA-AS1Q5QFB9 102 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 Q6ZRU5 148 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 ERASQ7Z444 233 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 YPEL4Q96NS1 127 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 CAMK2N2Q96S95 79 aa10.63□□□□□ -0.71
SSBP4-213ENST00000602088 FA2HQ7L5A8 372 aa10.62□□□□□ -0.71
SSBP4-213ENST00000602088 SLC7A5P1Q8MH63 180 aa10.62□□□□□ -0.71
SSBP4-213ENST00000602088 ORAOV1Q8WV07 137 aa10.62□□□□□ -0.71
SSBP4-213ENST00000602088 SCGB3A1Q96QR1 104 aa10.62□□□□□ -0.71
SSBP4-213ENST00000602088 PKIGQ9Y2B9 76 aa10.62□□□□□ -0.71
SSBP4-213ENST00000602088 A0A096LNI7 61 aa10.61□□□□□ -0.71
SSBP4-213ENST00000602088 IGKV2-24A0A0C4DH68 120 aa10.61□□□□□ -0.71
SSBP4-213ENST00000602088 LINC01549A6NIU2 74 aa10.61□□□□□ -0.71
SSBP4-213ENST00000602088 KRTAP10-4P60372 401 aaPredicted RBP10.61□□□□□ -0.71
SSBP4-213ENST00000602088 FAM19A3Q7Z5A8 133 aa10.61□□□□□ -0.71
SSBP4-213ENST00000602088 MAJINQ3KP22 176 aa10.6□□□□□ -0.71
SSBP4-213ENST00000602088 C18orf32Q8TCD1 76 aa10.6□□□□□ -0.71
SSBP4-213ENST00000602088 SMCO4Q9NRQ5 59 aa10.6□□□□□ -0.71
SSBP4-213ENST00000602088 PLAC8Q9NZF1 115 aa10.6□□□□□ -0.71
SSBP4-213ENST00000602088 FLG2Q5D862 2391 aaPredicted RBP10.59□□□□□ -0.71
SSBP4-213ENST00000602088 F8WDY8 70 aa10.59□□□□□ -0.71
SSBP4-213ENST00000602088 LINC01561Q8N1V8 128 aa10.59□□□□□ -0.71
SSBP4-213ENST00000602088 URB1-AS1Q96HZ7 61 aa10.59□□□□□ -0.71
SSBP4-213ENST00000602088 KIAA0087Q14695 138 aa10.58□□□□□ -0.72
SSBP4-213ENST00000602088 RNF151Q2KHN1 245 aa10.58□□□□□ -0.72
SSBP4-213ENST00000602088 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
SSBP4-213ENST00000602088 MYCBP2O75592 4640 aa10.57□□□□□ -0.72
SSBP4-213ENST00000602088 LOC107984640A0A0U1RRK4 108 aa10.57□□□□□ -0.72
SSBP4-213ENST00000602088 LINC00614P0C842 121 aa10.57□□□□□ -0.72
SSBP4-213ENST00000602088 SEC11AP67812 179 aa10.57□□□□□ -0.72
SSBP4-213ENST00000602088 CBLN2Q8IUK8 224 aa10.57□□□□□ -0.72
SSBP4-213ENST00000602088 RPL37AP61513 92 aaKnown RBP10.56□□□□□ -0.72
SSBP4-213ENST00000602088 STPG4Q8N801 248 aa10.56□□□□□ -0.72
SSBP4-213ENST00000602088 MRPL35Q9NZE8 188 aaKnown RBP10.56□□□□□ -0.72
SSBP4-213ENST00000602088 A0A096LNJ9 63 aa10.55□□□□□ -0.72
SSBP4-213ENST00000602088 A0A0J9YXV3 536 aa10.55□□□□□ -0.72
SSBP4-213ENST00000602088 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.55□□□□□ -0.72
SSBP4-213ENST00000602088 NDUFA1O15239 70 aa10.55□□□□□ -0.72
SSBP4-213ENST00000602088 PTTG1IPP53801 180 aa10.55□□□□□ -0.72
SSBP4-213ENST00000602088 HERVK_113P63121 156 aa10.55□□□□□ -0.72
SSBP4-213ENST00000602088 C10orf25Q5T742 122 aa10.55□□□□□ -0.72
SSBP4-213ENST00000602088 UNQ6190/PRO20217Q6UXQ8 127 aa10.54□□□□□ -0.72
SSBP4-213ENST00000602088 CST9LQ9H4G1 147 aa10.54□□□□□ -0.72
SSBP4-213ENST00000602088 GEMIN7Q9H840 131 aaKnown RBP10.54□□□□□ -0.72
SSBP4-213ENST00000602088 CDKN2A-AS1Q9UH64 79 aa10.54□□□□□ -0.72
SSBP4-213ENST00000602088 RAB5BP61020 215 aa10.53□□□□□ -0.72
SSBP4-213ENST00000602088 GAGE2BQ13066 116 aa10.53□□□□□ -0.72
SSBP4-213ENST00000602088 TINCRA0A1B0GVN0 87 aa10.52□□□□□ -0.73
SSBP4-213ENST00000602088 PMVKQ15126 192 aa10.52□□□□□ -0.73
SSBP4-213ENST00000602088 C6orf48Q9UBA6 75 aa10.52□□□□□ -0.73
SSBP4-213ENST00000602088 HBDP02042 147 aa10.51□□□□□ -0.73
SSBP4-213ENST00000602088 RPL18AQ02543 176 aaKnown RBP10.51□□□□□ -0.73
SSBP4-213ENST00000602088 C2orf82Q6UX34 121 aa10.51□□□□□ -0.73
SSBP4-213ENST00000602088 TLX1NBP0CAT3 122 aa10.5□□□□□ -0.73
SSBP4-213ENST00000602088 PMCHL1Q16048 86 aa10.5□□□□□ -0.73
SSBP4-213ENST00000602088 PDZD11Q5EBL8 140 aa10.5□□□□□ -0.73
SSBP4-213ENST00000602088 C7orf33Q8WU49 177 aa10.5□□□□□ -0.73
SSBP4-213ENST00000602088 DMBT1Q9UGM3 2413 aaPredicted RBP10.49□□□□□ -0.73
SSBP4-213ENST00000602088 IGLV5-45A0A087WSX0 123 aa10.49□□□□□ -0.73
SSBP4-213ENST00000602088 TRBV30A0A0K0K1B3 111 aa10.49□□□□□ -0.73
SSBP4-213ENST00000602088 PRSS2P07478 247 aa10.49□□□□□ -0.73
SSBP4-213ENST00000602088 C6orf226Q5I0X4 101 aa10.49□□□□□ -0.73
SSBP4-213ENST00000602088 Q8IZM0 81 aa10.49□□□□□ -0.73
SSBP4-213ENST00000602088 LINC00469Q8N7U9 141 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms