RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 Q6ZN92 141 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 TEX43Q6ZNM6 134 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 FAM19A2Q8N3H0 131 aa12.44□□□□□ -0.42
CCDC9-205ENST00000600117 BAALCQ8WXS3 180 aa12.43□□□□□ -0.42
CCDC9-205ENST00000600117 VCX2Q9H322 139 aa12.43□□□□□ -0.42
CCDC9-205ENST00000600117 FAT1Q14517 4588 aa12.42□□□□□ -0.42
CCDC9-205ENST00000600117 XCL1P47992 114 aa12.42□□□□□ -0.42
CCDC9-205ENST00000600117 FOXI1Q12951 378 aa12.42□□□□□ -0.42
CCDC9-205ENST00000600117 PAPPA-AS1Q5QFB9 102 aa12.42□□□□□ -0.42
CCDC9-205ENST00000600117 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.41□□□□□ -0.42
CCDC9-205ENST00000600117 UBE2D1P51668 147 aa12.41□□□□□ -0.42
CCDC9-205ENST00000600117 COA6Q5JTJ3 125 aaKnown RBP12.41□□□□□ -0.42
CCDC9-205ENST00000600117 LECT2O14960 151 aa12.4□□□□□ -0.42
CCDC9-205ENST00000600117 CD164L2Q6UWJ8 174 aa12.4□□□□□ -0.42
CCDC9-205ENST00000600117 C2orf88Q9BSF0 95 aa12.4□□□□□ -0.42
CCDC9-205ENST00000600117 ATP5LO75964 103 aa12.39□□□□□ -0.43
CCDC9-205ENST00000600117 LINC00242Q5T6M2 205 aa12.39□□□□□ -0.43
CCDC9-205ENST00000600117 FAM19A3Q7Z5A8 133 aa12.39□□□□□ -0.43
CCDC9-205ENST00000600117 USP17L23D6RBM5 183 aa12.38□□□□□ -0.43
CCDC9-205ENST00000600117 CST9LQ9H4G1 147 aa12.38□□□□□ -0.43
CCDC9-205ENST00000600117 NDUFA6P56556 154 aa12.37□□□□□ -0.43
CCDC9-205ENST00000600117 PMVKQ15126 192 aa12.37□□□□□ -0.43
CCDC9-205ENST00000600117 IGHV3OR16-9A0A0B4J2B5 98 aa12.36□□□□□ -0.43
CCDC9-205ENST00000600117 COX6A2Q02221 97 aa12.36□□□□□ -0.43
CCDC9-205ENST00000600117 Q8N814 137 aa12.36□□□□□ -0.43
CCDC9-205ENST00000600117 IFI27L1Q96BM0 104 aa12.36□□□□□ -0.43
CCDC9-205ENST00000600117 EREGO14944 169 aa12.35□□□□□ -0.43
CCDC9-205ENST00000600117 C15orf56Q8N910 161 aa12.35□□□□□ -0.43
CCDC9-205ENST00000600117 A0A0J9YXV3 536 aa12.34□□□□□ -0.43
CCDC9-205ENST00000600117 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
CCDC9-205ENST00000600117 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
CCDC9-205ENST00000600117 C5orf38Q86SI9 138 aa12.34□□□□□ -0.43
CCDC9-205ENST00000600117 COX7A2LO14548 114 aa12.33□□□□□ -0.44
CCDC9-205ENST00000600117 SPATA12Q7Z6I5 190 aa12.33□□□□□ -0.44
CCDC9-205ENST00000600117 EPM2AB3EWF7 344 aa12.32□□□□□ -0.44
CCDC9-205ENST00000600117 PRSS1P07477 247 aa12.32□□□□□ -0.44
CCDC9-205ENST00000600117 FABP4P15090 132 aa12.32□□□□□ -0.44
CCDC9-205ENST00000600117 TINCRA0A1B0GVN0 87 aa12.31□□□□□ -0.44
CCDC9-205ENST00000600117 FUSP35637 526 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC9-205ENST00000600117 SEC11AP67812 179 aa12.31□□□□□ -0.44
CCDC9-205ENST00000600117 C14orf177Q52M58 125 aa12.31□□□□□ -0.44
CCDC9-205ENST00000600117 HSPB8Q9UJY1 196 aa12.31□□□□□ -0.44
CCDC9-205ENST00000600117 FLG2Q5D862 2391 aaPredicted RBP12.31□□□□□ -0.44
CCDC9-205ENST00000600117 IGLV4-69A0A075B6H9 119 aa12.3□□□□□ -0.44
CCDC9-205ENST00000600117 A0A087WZ39 114 aa12.3□□□□□ -0.44
CCDC9-205ENST00000600117 TRAV12-1A0A0B4J245 112 aa12.3□□□□□ -0.44
CCDC9-205ENST00000600117 IGHV1-58A0A0C4DH39 117 aa12.3□□□□□ -0.44
CCDC9-205ENST00000600117 HERVK_113P63121 156 aa12.3□□□□□ -0.44
CCDC9-205ENST00000600117 CFAP161Q6P656 301 aa12.3□□□□□ -0.44
CCDC9-205ENST00000600117 PACRGQ96M98 296 aaPredicted RBP12.3□□□□□ -0.44
CCDC9-205ENST00000600117 IGLV5-45A0A087WSX0 123 aa12.29□□□□□ -0.44
CCDC9-205ENST00000600117 GVQW2A0A096LPI5 108 aaPredicted RBP12.29□□□□□ -0.44
CCDC9-205ENST00000600117 INAFM2P0DMQ5 153 aa12.29□□□□□ -0.44
CCDC9-205ENST00000600117 IGLC3P0DOY3 106 aa12.29□□□□□ -0.44
CCDC9-205ENST00000600117 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.28□□□□□ -0.44
CCDC9-205ENST00000600117 MALP21145 153 aa12.28□□□□□ -0.44
CCDC9-205ENST00000600117 NTN5Q8WTR8 489 aaPredicted RBP12.28□□□□□ -0.44
CCDC9-205ENST00000600117 GEMIN7Q9H840 131 aaKnown RBP12.28□□□□□ -0.44
CCDC9-205ENST00000600117 CDKN2A-AS1Q9UH64 79 aa12.28□□□□□ -0.44
CCDC9-205ENST00000600117 HIGD2BQ4VC39 106 aa12.27□□□□□ -0.45
CCDC9-205ENST00000600117 LINC01561Q8N1V8 128 aa12.27□□□□□ -0.45
CCDC9-205ENST00000600117 PGPEP1Q9NXJ5 209 aa12.27□□□□□ -0.45
CCDC9-205ENST00000600117 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
CCDC9-205ENST00000600117 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
CCDC9-205ENST00000600117 CHAC1Q9BUX1 264 aa12.26□□□□□ -0.45
CCDC9-205ENST00000600117 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
CCDC9-205ENST00000600117 C11orf86A6NJI1 115 aa12.25□□□□□ -0.45
CCDC9-205ENST00000600117 APOMO95445 188 aa12.25□□□□□ -0.45
CCDC9-205ENST00000600117 SLPIP03973 132 aa12.25□□□□□ -0.45
CCDC9-205ENST00000600117 ODF1Q14990 250 aa12.25□□□□□ -0.45
CCDC9-205ENST00000600117 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
CCDC9-205ENST00000600117 LINC00469Q8N7U9 141 aa12.25□□□□□ -0.45
CCDC9-205ENST00000600117 MRPL35Q9NZE8 188 aaKnown RBP12.25□□□□□ -0.45
CCDC9-205ENST00000600117 F8VRH5 84 aa12.24□□□□□ -0.45
CCDC9-205ENST00000600117 ZNF22P17026 224 aaPredicted RBP12.24□□□□□ -0.45
CCDC9-205ENST00000600117 HIST3H2BBQ8N257 126 aa12.24□□□□□ -0.45
CCDC9-205ENST00000600117 IGLV5-52A0A0A0MRZ9 124 aa12.23□□□□□ -0.45
CCDC9-205ENST00000600117 H0Y8G0 127 aa12.23□□□□□ -0.45
CCDC9-205ENST00000600117 S100A6P06703 90 aa12.23□□□□□ -0.45
CCDC9-205ENST00000600117 CNBPP62633 177 aaKnown RBP12.23□□□□□ -0.45
CCDC9-205ENST00000600117 OR10D4PQ8NGN7 298 aa12.23□□□□□ -0.45
CCDC9-205ENST00000600117 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
CCDC9-205ENST00000600117 LINC00526Q96FQ7 95 aa12.23□□□□□ -0.45
CCDC9-205ENST00000600117 MAP1LC3CQ9BXW4 147 aa12.23□□□□□ -0.45
CCDC9-205ENST00000600117 UBR4Q5T4S7 5183 aa12.22□□□□□ -0.45
CCDC9-205ENST00000600117 SPAG11BQ08648 103 aa12.22□□□□□ -0.45
CCDC9-205ENST00000600117 SMIM1B2RUZ4 78 aa12.21□□□□□ -0.45
CCDC9-205ENST00000600117 KIAA0087Q14695 138 aa12.21□□□□□ -0.45
CCDC9-205ENST00000600117 SYS1-DBNDD2H3BUS1 97 aa12.2□□□□□ -0.46
CCDC9-205ENST00000600117 ZNF561-AS1K7EIQ3 104 aa12.2□□□□□ -0.46
CCDC9-205ENST00000600117 C5orf52A6NGY3 159 aa12.19□□□□□ -0.46
CCDC9-205ENST00000600117 C3orf79P0CE67 100 aa12.19□□□□□ -0.46
CCDC9-205ENST00000600117 SNRPEP62304 92 aaKnown RBP12.19□□□□□ -0.46
CCDC9-205ENST00000600117 HIST1H2BLQ99880 126 aa12.19□□□□□ -0.46
CCDC9-205ENST00000600117 H3BRM9 83 aa12.18□□□□□ -0.46
CCDC9-205ENST00000600117 SPINK8P0C7L1 97 aa12.18□□□□□ -0.46
CCDC9-205ENST00000600117 C2orf48Q96LS8 159 aa12.18□□□□□ -0.46
CCDC9-205ENST00000600117 PMCHL2Q9BQD1 86 aa12.18□□□□□ -0.46
CCDC9-205ENST00000600117 GCSHP23434 173 aa12.17□□□□□ -0.46
CCDC9-205ENST00000600117 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms