RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 UNQ6190/PRO20217Q6UXQ8 127 aa8.89□□□□□ -0.99
XRCC1-209ENST00000599693 NRACQ8N912 160 aa8.89□□□□□ -0.99
XRCC1-209ENST00000599693 TMEM18Q96B42 140 aa8.89□□□□□ -0.99
XRCC1-209ENST00000599693 GAGE2DQ9UEU5 116 aa8.89□□□□□ -0.99
XRCC1-209ENST00000599693 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
XRCC1-209ENST00000599693 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
XRCC1-209ENST00000599693 PPP1R2P9O14990 202 aa8.86□□□□□ -0.99
XRCC1-209ENST00000599693 TSPAN13O95857 204 aa8.86□□□□□ -0.99
XRCC1-209ENST00000599693 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
XRCC1-209ENST00000599693 ZNF861PO60384 105 aa8.84□□□□□ -0.99
XRCC1-209ENST00000599693 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
XRCC1-209ENST00000599693 RIGQ13278 110 aa8.84□□□□□ -0.99
XRCC1-209ENST00000599693 MRPS36P82909 103 aaKnown RBP8.83□□□□□ -1
XRCC1-209ENST00000599693 KIAA0087Q14695 138 aa8.83□□□□□ -1
XRCC1-209ENST00000599693 SPANXA1Q9NS26 97 aa8.83□□□□□ -1
XRCC1-209ENST00000599693 TGIF2-C20orf24A0A0A6YYL0 155 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 TRBV30A0A0K0K1B3 111 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 IFITM10A6NMD0 228 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 NDUFC2-KCTD14E9PQ53 114 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 TCAPO15273 167 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 CEBPGP53567 150 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 HBBP68871 147 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
XRCC1-209ENST00000599693 SLC51BQ86UW2 128 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 C20orf78Q9BR46 151 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 OSTCQ9NRP0 149 aa8.82□□□□□ -1
XRCC1-209ENST00000599693 RPL32P62910 135 aaKnown RBP8.81□□□□□ -1
XRCC1-209ENST00000599693 MRPL51Q4U2R6 128 aaKnown RBP8.81□□□□□ -1
XRCC1-209ENST00000599693 LINC01551Q86U37 167 aa8.81□□□□□ -1
XRCC1-209ENST00000599693 NUPR1O60356 82 aa8.8□□□□□ -1
XRCC1-209ENST00000599693 FAM104BQ5XKR9 115 aa8.8□□□□□ -1
XRCC1-209ENST00000599693 SMIM7Q9BQ49 75 aa8.8□□□□□ -1
XRCC1-209ENST00000599693 TRBV24-1A0A075B6N3 115 aa8.79□□□□□ -1
XRCC1-209ENST00000599693 A0A087X002 238 aa8.79□□□□□ -1
XRCC1-209ENST00000599693 LINC00862A6NCI5 91 aa8.79□□□□□ -1
XRCC1-209ENST00000599693 C2orf82Q6UX34 121 aa8.79□□□□□ -1
XRCC1-209ENST00000599693 PACRGQ96M98 296 aaPredicted RBP8.79□□□□□ -1
XRCC1-209ENST00000599693 MUC17Q685J3 4493 aa8.78□□□□□ -1
XRCC1-209ENST00000599693 TYMSOSQ8TAI1 123 aa8.78□□□□□ -1
XRCC1-209ENST00000599693 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
XRCC1-209ENST00000599693 V9GYV3 84 aa8.78□□□□□ -1
XRCC1-209ENST00000599693 CTDSP1Q9GZU7 261 aa8.77□□□□□ -1.01
XRCC1-209ENST00000599693 TNFRSF6BO95407 300 aa8.76□□□□□ -1.01
XRCC1-209ENST00000599693 CRYGAP11844 174 aa8.76□□□□□ -1.01
XRCC1-209ENST00000599693 CKS2P33552 79 aa8.76□□□□□ -1.01
XRCC1-209ENST00000599693 NAT8BQ9UHF3 227 aa8.76□□□□□ -1.01
XRCC1-209ENST00000599693 C22orf24Q9Y442 160 aa8.76□□□□□ -1.01
XRCC1-209ENST00000599693 ZNF727A8MUV8 499 aa8.75□□□□□ -1.01
XRCC1-209ENST00000599693 BLOC1S1P78537 153 aa8.75□□□□□ -1.01
XRCC1-209ENST00000599693 LBHQ53QV2 105 aaPredicted RBP8.75□□□□□ -1.01
XRCC1-209ENST00000599693 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
XRCC1-209ENST00000599693 IFI27P40305 119 aaPredicted RBP8.74□□□□□ -1.01
XRCC1-209ENST00000599693 RPL28P46779 137 aaKnown RBP8.74□□□□□ -1.01
XRCC1-209ENST00000599693 FAM74A3Q4VXF1 159 aa8.73□□□□□ -1.01
XRCC1-209ENST00000599693 TCTE3Q8IZS6 198 aa8.73□□□□□ -1.01
XRCC1-209ENST00000599693 LINC01561Q8N1V8 128 aa8.73□□□□□ -1.01
XRCC1-209ENST00000599693 LINC00469Q8N7U9 141 aa8.73□□□□□ -1.01
XRCC1-209ENST00000599693 IGLV4-3A0A075B6K6 122 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 D6R8Y8 96 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 BCE1O60756 84 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 NPYP01303 97 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 TPRXLQ17RH7 258 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 RETNLBQ9BQ08 111 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 EIF5A2Q9GZV4 153 aaKnown RBP8.72□□□□□ -1.01
XRCC1-209ENST00000599693 CDIP1Q9H305 208 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 PYGO1Q9Y3Y4 419 aa8.72□□□□□ -1.01
XRCC1-209ENST00000599693 A0A1B0GW15 77 aa8.71□□□□□ -1.02
XRCC1-209ENST00000599693 ALKAL2Q6UX46 152 aa8.71□□□□□ -1.02
XRCC1-209ENST00000599693 TMEM141Q96I45 108 aa8.71□□□□□ -1.02
XRCC1-209ENST00000599693 XAGE1AQ9HD64 81 aa8.71□□□□□ -1.02
XRCC1-209ENST00000599693 TP73-AS1Q9UF72 201 aa8.71□□□□□ -1.02
XRCC1-209ENST00000599693 SMIM27A0A1W2PRY6 76 aa8.7□□□□□ -1.02
XRCC1-209ENST00000599693 PRSS2P07478 247 aa8.7□□□□□ -1.02
XRCC1-209ENST00000599693 CKS1BP61024 79 aa8.7□□□□□ -1.02
XRCC1-209ENST00000599693 MRPL55Q7Z7F7 128 aaKnown RBP8.7□□□□□ -1.02
XRCC1-209ENST00000599693 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
XRCC1-209ENST00000599693 RAB5AP20339 215 aa8.69□□□□□ -1.02
XRCC1-209ENST00000599693 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
XRCC1-209ENST00000599693 Q6ZN92 141 aa8.69□□□□□ -1.02
XRCC1-209ENST00000599693 TEX43Q6ZNM6 134 aa8.69□□□□□ -1.02
XRCC1-209ENST00000599693 ANAPC11Q9NYG5 84 aa8.69□□□□□ -1.02
XRCC1-209ENST00000599693 TOMM7Q9P0U1 55 aa8.69□□□□□ -1.02
XRCC1-209ENST00000599693 F8W036 122 aa8.68□□□□□ -1.02
XRCC1-209ENST00000599693 LINC00304Q8N9R0 145 aa8.68□□□□□ -1.02
XRCC1-209ENST00000599693 C2orf88Q9BSF0 95 aa8.68□□□□□ -1.02
XRCC1-209ENST00000599693 PPBPP02775 128 aa8.67□□□□□ -1.02
XRCC1-209ENST00000599693 S100A8P05109 93 aa8.67□□□□□ -1.02
XRCC1-209ENST00000599693 RPL23P62829 140 aaKnown RBP8.67□□□□□ -1.02
XRCC1-209ENST00000599693 C6orf226Q5I0X4 101 aa8.67□□□□□ -1.02
XRCC1-209ENST00000599693 Q8IZM0 81 aa8.67□□□□□ -1.02
XRCC1-209ENST00000599693 IGLV7-46A0A075B6I9 117 aa8.66□□□□□ -1.02
XRCC1-209ENST00000599693 LINC00173Q6ZV60 143 aa8.66□□□□□ -1.02
XRCC1-209ENST00000599693 A0A1B0GXF2 115 aa8.65□□□□□ -1.02
XRCC1-209ENST00000599693 ADIRFQ15847 76 aa8.65□□□□□ -1.02
XRCC1-209ENST00000599693 FAM229BQ4G0N7 80 aa8.65□□□□□ -1.02
XRCC1-209ENST00000599693 MRPL54Q6P161 138 aaKnown RBP8.65□□□□□ -1.02
XRCC1-209ENST00000599693 LINC00167Q96N53 147 aa8.65□□□□□ -1.02
XRCC1-209ENST00000599693 ALKBH7Q9BT30 221 aaPredicted RBP8.65□□□□□ -1.02
XRCC1-209ENST00000599693 RPL37AP8A6NKH3 93 aa8.64□□□□□ -1.03
XRCC1-209ENST00000599693 F8VRH5 84 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms