RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
SCAF1-203ENST00000598359 RBX1P62877 108 aa9.01□□□□□ -0.97
SCAF1-203ENST00000598359 CTAG1AP78358 180 aa9.01□□□□□ -0.97
SCAF1-203ENST00000598359 C1orf43Q9BWL3 253 aa9.01□□□□□ -0.97
SCAF1-203ENST00000598359 LINC01549A6NIU2 74 aa9□□□□□ -0.97
SCAF1-203ENST00000598359 ATP5LO75964 103 aa9□□□□□ -0.97
SCAF1-203ENST00000598359 ST20Q9HBF5 79 aa9□□□□□ -0.97
SCAF1-203ENST00000598359 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
SCAF1-203ENST00000598359 FAM229AH3BQW9 127 aa8.99□□□□□ -0.97
SCAF1-203ENST00000598359 Q6ZSA8 131 aa8.99□□□□□ -0.97
SCAF1-203ENST00000598359 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
SCAF1-203ENST00000598359 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
SCAF1-203ENST00000598359 UQCR10Q9UDW1 63 aa8.99□□□□□ -0.97
SCAF1-203ENST00000598359 TRBV27A0A0K0K1C4 114 aa8.98□□□□□ -0.97
SCAF1-203ENST00000598359 H7C1H1 209 aa8.98□□□□□ -0.97
SCAF1-203ENST00000598359 TCAPO15273 167 aa8.98□□□□□ -0.97
SCAF1-203ENST00000598359 MAJINQ3KP22 176 aa8.98□□□□□ -0.97
SCAF1-203ENST00000598359 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
SCAF1-203ENST00000598359 TOMM6Q96B49 74 aa8.98□□□□□ -0.97
SCAF1-203ENST00000598359 G0S2P27469 103 aa8.97□□□□□ -0.97
SCAF1-203ENST00000598359 LBHQ53QV2 105 aaPredicted RBP8.97□□□□□ -0.97
SCAF1-203ENST00000598359 IGLV10-54A0A075B6I4 117 aa8.96□□□□□ -0.98
SCAF1-203ENST00000598359 USP17L23D6RBM5 183 aa8.96□□□□□ -0.98
SCAF1-203ENST00000598359 VCYO14598 125 aa8.96□□□□□ -0.98
SCAF1-203ENST00000598359 ODF1Q14990 250 aa8.96□□□□□ -0.98
SCAF1-203ENST00000598359 MIAQ16674 131 aa8.96□□□□□ -0.98
SCAF1-203ENST00000598359 PRR34Q9NV39 138 aa8.96□□□□□ -0.98
SCAF1-203ENST00000598359 IGLV4-60A0A075B6I1 120 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 TRAV12-1A0A0B4J245 112 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 hDV102S1A0JD36 115 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 HSBP1L1C9JCN9 74 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 KRTAP26-1Q6PEX3 210 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 SCXQ7RTU7 201 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 C20orf203Q8NBC4 194 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 TMEM243Q9BU79 118 aa8.95□□□□□ -0.98
SCAF1-203ENST00000598359 H0Y8G0 127 aa8.94□□□□□ -0.98
SCAF1-203ENST00000598359 PRSS1P07477 247 aa8.94□□□□□ -0.98
SCAF1-203ENST00000598359 C2orf66Q6UXQ4 117 aa8.94□□□□□ -0.98
SCAF1-203ENST00000598359 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
SCAF1-203ENST00000598359 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
SCAF1-203ENST00000598359 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.93□□□□□ -0.98
SCAF1-203ENST00000598359 REG3AQ06141 175 aa8.93□□□□□ -0.98
SCAF1-203ENST00000598359 C14orf177Q52M58 125 aa8.93□□□□□ -0.98
SCAF1-203ENST00000598359 ERASQ7Z444 233 aa8.93□□□□□ -0.98
SCAF1-203ENST00000598359 CYSLTR1Q9Y271 337 aa8.93□□□□□ -0.98
SCAF1-203ENST00000598359 COTL1Q14019 142 aa8.92□□□□□ -0.98
SCAF1-203ENST00000598359 C2orf88Q9BSF0 95 aa8.92□□□□□ -0.98
SCAF1-203ENST00000598359 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
SCAF1-203ENST00000598359 M0R143 59 aa8.91□□□□□ -0.98
SCAF1-203ENST00000598359 HNRNPA3P51991 378 aaKnown RBP8.91□□□□□ -0.98
SCAF1-203ENST00000598359 Q6ZN92 141 aa8.91□□□□□ -0.98
SCAF1-203ENST00000598359 CIRBP-AS1Q8TBR5 109 aa8.91□□□□□ -0.98
SCAF1-203ENST00000598359 SCGB3A1Q96QR1 104 aa8.91□□□□□ -0.98
SCAF1-203ENST00000598359 TIMM17AQ99595 171 aa8.91□□□□□ -0.98
SCAF1-203ENST00000598359 SNHG12Q9BXW3 62 aa8.91□□□□□ -0.98
SCAF1-203ENST00000598359 IGIPA6NJ69 53 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 I3L3M4 83 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 UBE2L6O14933 153 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 DPM2O94777 84 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 TSHBP01222 138 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 IGKCP01834 107 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 COX8AP10176 69 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 ANKRD39Q53RE8 183 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 SLC25A34Q6PIV7 304 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 TMEM141Q96I45 108 aa8.9□□□□□ -0.98
SCAF1-203ENST00000598359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
SCAF1-203ENST00000598359 IGKV3OR2-268A0A0C4DH90 116 aa8.89□□□□□ -0.99
SCAF1-203ENST00000598359 A0A1B0GUV1 79 aa8.89□□□□□ -0.99
SCAF1-203ENST00000598359 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
SCAF1-203ENST00000598359 F8VRH5 84 aa8.89□□□□□ -0.99
SCAF1-203ENST00000598359 J3QL48 77 aa8.89□□□□□ -0.99
SCAF1-203ENST00000598359 DLEU1O43261 78 aa8.88□□□□□ -0.99
SCAF1-203ENST00000598359 PLA2G1BP04054 148 aaKnown RBP8.88□□□□□ -0.99
SCAF1-203ENST00000598359 FGF6P10767 208 aa8.88□□□□□ -0.99
SCAF1-203ENST00000598359 PLNP26678 52 aa8.88□□□□□ -0.99
SCAF1-203ENST00000598359 MRPL35Q9NZE8 188 aaKnown RBP8.88□□□□□ -0.99
SCAF1-203ENST00000598359 PANO1I0J062 215 aa8.87□□□□□ -0.99
SCAF1-203ENST00000598359 NPSP0C0P6 89 aa8.87□□□□□ -0.99
SCAF1-203ENST00000598359 TRAV8-4A0A0B4J246 113 aa8.86□□□□□ -0.99
SCAF1-203ENST00000598359 BOD1L2Q8IYS8 172 aa8.86□□□□□ -0.99
SCAF1-203ENST00000598359 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
SCAF1-203ENST00000598359 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
SCAF1-203ENST00000598359 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
SCAF1-203ENST00000598359 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
SCAF1-203ENST00000598359 SLPIP03973 132 aa8.85□□□□□ -0.99
SCAF1-203ENST00000598359 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
SCAF1-203ENST00000598359 AMMECR1LQ6DCA0 310 aa8.85□□□□□ -0.99
SCAF1-203ENST00000598359 DGAT2L7PQ6IED9 249 aa8.85□□□□□ -0.99
SCAF1-203ENST00000598359 STPG4Q8N801 248 aa8.85□□□□□ -0.99
SCAF1-203ENST00000598359 PYGO1Q9Y3Y4 419 aa8.85□□□□□ -0.99
SCAF1-203ENST00000598359 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.85□□□□□ -0.99
SCAF1-203ENST00000598359 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
SCAF1-203ENST00000598359 PMVKQ15126 192 aa8.84□□□□□ -0.99
SCAF1-203ENST00000598359 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
SCAF1-203ENST00000598359 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
SCAF1-203ENST00000598359 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
SCAF1-203ENST00000598359 SDIM1Q6ZPB5 146 aa8.83□□□□□ -1
SCAF1-203ENST00000598359 C15orf56Q8N910 161 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms