RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 A0A087WZ39 114 aa9.67□□□□□ -0.86
LINC02560-201ENST00000596379 F8WDY8 70 aa9.67□□□□□ -0.86
LINC02560-201ENST00000596379 NDUFA1O15239 70 aa9.67□□□□□ -0.86
LINC02560-201ENST00000596379 CKS2P33552 79 aa9.67□□□□□ -0.86
LINC02560-201ENST00000596379 RPL23P62829 140 aaKnown RBP9.67□□□□□ -0.86
LINC02560-201ENST00000596379 RPL32P62910 135 aaKnown RBP9.67□□□□□ -0.86
LINC02560-201ENST00000596379 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
LINC02560-201ENST00000596379 KRTAP11-1Q8IUC1 163 aa9.67□□□□□ -0.86
LINC02560-201ENST00000596379 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
LINC02560-201ENST00000596379 TCAPO15273 167 aa9.66□□□□□ -0.86
LINC02560-201ENST00000596379 TNFRSF6BO95407 300 aa9.66□□□□□ -0.86
LINC02560-201ENST00000596379 UNQ6190/PRO20217Q6UXQ8 127 aa9.66□□□□□ -0.86
LINC02560-201ENST00000596379 SMIM27A0A1W2PRY6 76 aa9.65□□□□□ -0.86
LINC02560-201ENST00000596379 TLX1NBP0CAT3 122 aa9.65□□□□□ -0.86
LINC02560-201ENST00000596379 ADIRFQ15847 76 aa9.65□□□□□ -0.86
LINC02560-201ENST00000596379 SPANXA1Q9NS26 97 aa9.65□□□□□ -0.86
LINC02560-201ENST00000596379 C6orf48Q9UBA6 75 aa9.65□□□□□ -0.86
LINC02560-201ENST00000596379 HBBP68871 147 aa9.64□□□□□ -0.87
LINC02560-201ENST00000596379 MRPS36P82909 103 aaKnown RBP9.64□□□□□ -0.87
LINC02560-201ENST00000596379 GAGE2EQ4V326 116 aa9.64□□□□□ -0.87
LINC02560-201ENST00000596379 FAM19A5Q7Z5A7 132 aaPredicted RBP9.64□□□□□ -0.87
LINC02560-201ENST00000596379 SMIM2Q9BVW6 85 aa9.64□□□□□ -0.87
LINC02560-201ENST00000596379 GAGE2DQ9UEU5 116 aa9.64□□□□□ -0.87
LINC02560-201ENST00000596379 A0A1B0GW15 77 aa9.63□□□□□ -0.87
LINC02560-201ENST00000596379 IFITM10A6NMD0 228 aa9.63□□□□□ -0.87
LINC02560-201ENST00000596379 H0Y9J4 135 aa9.63□□□□□ -0.87
LINC02560-201ENST00000596379 hCG_2014768A0A024R1R8 64 aa9.62□□□□□ -0.87
LINC02560-201ENST00000596379 C9JQL5 133 aa9.62□□□□□ -0.87
LINC02560-201ENST00000596379 D6R8Y8 96 aa9.62□□□□□ -0.87
LINC02560-201ENST00000596379 NPYP01303 97 aa9.62□□□□□ -0.87
LINC02560-201ENST00000596379 KRTAP7-1Q8IUC3 87 aa9.62□□□□□ -0.87
LINC02560-201ENST00000596379 NAT8Q9UHE5 227 aa9.62□□□□□ -0.87
LINC02560-201ENST00000596379 KIAA0087Q14695 138 aa9.61□□□□□ -0.87
LINC02560-201ENST00000596379 MRPL54Q6P161 138 aaKnown RBP9.61□□□□□ -0.87
LINC02560-201ENST00000596379 SMDT1Q9H4I9 107 aa9.61□□□□□ -0.87
LINC02560-201ENST00000596379 TGIF2-C20orf24A0A0A6YYL0 155 aa9.6□□□□□ -0.87
LINC02560-201ENST00000596379 IGLV1-50A0A075B6I6 118 aa9.59□□□□□ -0.87
LINC02560-201ENST00000596379 F8W036 122 aa9.59□□□□□ -0.87
LINC02560-201ENST00000596379 KRTAP1-4P0C5Y4 121 aa9.59□□□□□ -0.87
LINC02560-201ENST00000596379 M0QXV9 152 aa9.58□□□□□ -0.88
LINC02560-201ENST00000596379 S100A8P05109 93 aa9.58□□□□□ -0.88
LINC02560-201ENST00000596379 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
LINC02560-201ENST00000596379 UBE2BP63146 152 aa9.58□□□□□ -0.88
LINC02560-201ENST00000596379 LINC00242Q5T6M2 205 aa9.58□□□□□ -0.88
LINC02560-201ENST00000596379 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
LINC02560-201ENST00000596379 A0A1B0GXF2 115 aa9.57□□□□□ -0.88
LINC02560-201ENST00000596379 PPBPP02775 128 aa9.57□□□□□ -0.88
LINC02560-201ENST00000596379 RAB5AP20339 215 aa9.57□□□□□ -0.88
LINC02560-201ENST00000596379 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
LINC02560-201ENST00000596379 C2orf82Q6UX34 121 aa9.57□□□□□ -0.88
LINC02560-201ENST00000596379 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
LINC02560-201ENST00000596379 PYGO1Q9Y3Y4 419 aa9.56□□□□□ -0.88
LINC02560-201ENST00000596379 NDUFC2-KCTD14E9PQ53 114 aa9.55□□□□□ -0.88
LINC02560-201ENST00000596379 PEA15Q15121 130 aa9.55□□□□□ -0.88
LINC02560-201ENST00000596379 C9orf129Q5T035 196 aaKnown RBP9.55□□□□□ -0.88
LINC02560-201ENST00000596379 TMEM136Q6ZRR5 245 aa9.55□□□□□ -0.88
LINC02560-201ENST00000596379 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
LINC02560-201ENST00000596379 PACRGQ96M98 296 aaPredicted RBP9.55□□□□□ -0.88
LINC02560-201ENST00000596379 UBE2D1P51668 147 aa9.54□□□□□ -0.88
LINC02560-201ENST00000596379 TMEM141Q96I45 108 aa9.54□□□□□ -0.88
LINC02560-201ENST00000596379 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
LINC02560-201ENST00000596379 LOC389332A0A1B0GUA5 103 aa9.52□□□□□ -0.89
LINC02560-201ENST00000596379 PRR4Q16378 134 aa9.52□□□□□ -0.89
LINC02560-201ENST00000596379 ZC2HC1BQ5TFG8 222 aa9.52□□□□□ -0.89
LINC02560-201ENST00000596379 TEX43Q6ZNM6 134 aa9.52□□□□□ -0.89
LINC02560-201ENST00000596379 RPL13AP40429 203 aaKnown RBP9.51□□□□□ -0.89
LINC02560-201ENST00000596379 LINC01561Q8N1V8 128 aa9.51□□□□□ -0.89
LINC02560-201ENST00000596379 PRSS47A8MTI9 375 aa9.5□□□□□ -0.89
LINC02560-201ENST00000596379 ATP5L2Q7Z4Y8 100 aa9.5□□□□□ -0.89
LINC02560-201ENST00000596379 ZNF861PO60384 105 aa9.49□□□□□ -0.89
LINC02560-201ENST00000596379 PRSS2P07478 247 aa9.49□□□□□ -0.89
LINC02560-201ENST00000596379 LINC00469Q8N7U9 141 aa9.49□□□□□ -0.89
LINC02560-201ENST00000596379 C2orf88Q9BSF0 95 aa9.49□□□□□ -0.89
LINC02560-201ENST00000596379 TOMM7Q9P0U1 55 aa9.49□□□□□ -0.89
LINC02560-201ENST00000596379 CARHSP1Q9Y2V2 147 aaKnown RBP9.49□□□□□ -0.89
LINC02560-201ENST00000596379 CKS1BP61024 79 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 C6orf226Q5I0X4 101 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 Q6ZN92 141 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 AMELXQ99217 191 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 VCX2Q9H322 139 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 MAP1LC3AQ9H492 121 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 CYSLTR1Q9Y271 337 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 C22orf24Q9Y442 160 aa9.48□□□□□ -0.89
LINC02560-201ENST00000596379 Q8N8P6 123 aa9.47□□□□□ -0.89
LINC02560-201ENST00000596379 LAMTOR2Q9Y2Q5 125 aa9.47□□□□□ -0.89
LINC02560-201ENST00000596379 XAGE1AQ9HD64 81 aa9.46□□□□□ -0.9
LINC02560-201ENST00000596379 MUC2Q02817 5179 aa9.46□□□□□ -0.9
LINC02560-201ENST00000596379 NUPR1O60356 82 aa9.45□□□□□ -0.9
LINC02560-201ENST00000596379 LBHQ53QV2 105 aaPredicted RBP9.45□□□□□ -0.9
LINC02560-201ENST00000596379 Q8IZM0 81 aa9.45□□□□□ -0.9
LINC02560-201ENST00000596379 ALKBH7Q9BT30 221 aaPredicted RBP9.45□□□□□ -0.9
LINC02560-201ENST00000596379 CTDSP1Q9GZU7 261 aa9.45□□□□□ -0.9
LINC02560-201ENST00000596379 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
LINC02560-201ENST00000596379 TSPAN13O95857 204 aa9.44□□□□□ -0.9
LINC02560-201ENST00000596379 FAM19A3Q7Z5A8 133 aa9.44□□□□□ -0.9
LINC02560-201ENST00000596379 ORMDL2Q53FV1 153 aa9.43□□□□□ -0.9
LINC02560-201ENST00000596379 A0A1B0GVG6 124 aa9.42□□□□□ -0.9
LINC02560-201ENST00000596379 NPSP0C0P6 89 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms