RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SDIM1Q6ZPB5 146 aa11.15□□□□□ -0.62
SHKBP1-212ENST00000596163 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
SHKBP1-212ENST00000596163 TOMM6Q96B49 74 aa11.15□□□□□ -0.62
SHKBP1-212ENST00000596163 PKIGQ9Y2B9 76 aa11.15□□□□□ -0.62
SHKBP1-212ENST00000596163 IGIPA6NJ69 53 aa11.14□□□□□ -0.63
SHKBP1-212ENST00000596163 HAMPP81172 84 aa11.14□□□□□ -0.63
SHKBP1-212ENST00000596163 TIMM17AQ99595 171 aa11.14□□□□□ -0.63
SHKBP1-212ENST00000596163 DNAH8Q96JB1 4490 aa11.14□□□□□ -0.63
SHKBP1-212ENST00000596163 SMR3BP02814 79 aaPredicted RBP11.13□□□□□ -0.63
SHKBP1-212ENST00000596163 ERASQ7Z444 233 aa11.13□□□□□ -0.63
SHKBP1-212ENST00000596163 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
SHKBP1-212ENST00000596163 IGHV3OR16-9A0A0B4J2B5 98 aa11.12□□□□□ -0.63
SHKBP1-212ENST00000596163 RAB5BP61020 215 aa11.12□□□□□ -0.63
SHKBP1-212ENST00000596163 SCXQ7RTU7 201 aa11.12□□□□□ -0.63
SHKBP1-212ENST00000596163 AMELXQ99217 191 aa11.12□□□□□ -0.63
SHKBP1-212ENST00000596163 UBE2D1P51668 147 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 SEC11AP67812 179 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 SYCNQ0VAF6 134 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 OR10D4PQ8NGN7 298 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 DPH3Q96FX2 82 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 C2orf48Q96LS8 159 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 YPEL4Q96NS1 127 aa11.11□□□□□ -0.63
SHKBP1-212ENST00000596163 LINC00242Q5T6M2 205 aa11.1□□□□□ -0.63
SHKBP1-212ENST00000596163 Q5VSD8 79 aa11.1□□□□□ -0.63
SHKBP1-212ENST00000596163 CIRBP-AS1Q8TBR5 109 aa11.1□□□□□ -0.63
SHKBP1-212ENST00000596163 C18orf32Q8TCD1 76 aa11.1□□□□□ -0.63
SHKBP1-212ENST00000596163 IGLV4-69A0A075B6H9 119 aa11.09□□□□□ -0.63
SHKBP1-212ENST00000596163 F8WDY8 70 aa11.09□□□□□ -0.63
SHKBP1-212ENST00000596163 LINC00614P0C842 121 aa11.09□□□□□ -0.63
SHKBP1-212ENST00000596163 CBLN2Q8IUK8 224 aa11.09□□□□□ -0.63
SHKBP1-212ENST00000596163 LINC00526Q96FQ7 95 aa11.09□□□□□ -0.63
SHKBP1-212ENST00000596163 KRTAP4-5Q9BYR2 181 aa11.09□□□□□ -0.63
SHKBP1-212ENST00000596163 A0A087WZ39 114 aa11.08□□□□□ -0.64
SHKBP1-212ENST00000596163 COX6A2Q02221 97 aa11.08□□□□□ -0.64
SHKBP1-212ENST00000596163 SPAG11BQ08648 103 aa11.08□□□□□ -0.64
SHKBP1-212ENST00000596163 LINC00173Q6ZV60 143 aa11.08□□□□□ -0.64
SHKBP1-212ENST00000596163 LINC01561Q8N1V8 128 aa11.08□□□□□ -0.64
SHKBP1-212ENST00000596163 ORAOV1Q8WV07 137 aa11.08□□□□□ -0.64
SHKBP1-212ENST00000596163 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
SHKBP1-212ENST00000596163 FAM19A3Q7Z5A8 133 aa11.07□□□□□ -0.64
SHKBP1-212ENST00000596163 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.07□□□□□ -0.64
SHKBP1-212ENST00000596163 PLA2G1BP04054 148 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-212ENST00000596163 HERVK_113P63121 156 aa11.06□□□□□ -0.64
SHKBP1-212ENST00000596163 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
SHKBP1-212ENST00000596163 ZC2HC1BQ5TFG8 222 aa11.06□□□□□ -0.64
SHKBP1-212ENST00000596163 LINC00474Q9P2X8 69 aa11.06□□□□□ -0.64
SHKBP1-212ENST00000596163 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
SHKBP1-212ENST00000596163 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
SHKBP1-212ENST00000596163 GEMIN7Q9H840 131 aaKnown RBP11.05□□□□□ -0.64
SHKBP1-212ENST00000596163 Q6ZRU5 148 aa11.04□□□□□ -0.64
SHKBP1-212ENST00000596163 HBDP02042 147 aa11.03□□□□□ -0.64
SHKBP1-212ENST00000596163 RNF151Q2KHN1 245 aa11.03□□□□□ -0.64
SHKBP1-212ENST00000596163 SPACA4Q8TDM5 124 aa11.03□□□□□ -0.64
SHKBP1-212ENST00000596163 LOC107984640A0A0U1RRK4 108 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 PANO1I0J062 215 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 NDUFA1O15239 70 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 CHTF8P0CG12 524 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 PMVKQ15126 192 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 MAJINQ3KP22 176 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 CST9LQ9H4G1 147 aa11.02□□□□□ -0.65
SHKBP1-212ENST00000596163 IGKV2-24A0A0C4DH68 120 aa11.01□□□□□ -0.65
SHKBP1-212ENST00000596163 INAFM2P0DMQ5 153 aa11.01□□□□□ -0.65
SHKBP1-212ENST00000596163 CHCHD1Q96BP2 118 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-212ENST00000596163 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
SHKBP1-212ENST00000596163 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
SHKBP1-212ENST00000596163 A0A087WYN8 130 aa11□□□□□ -0.65
SHKBP1-212ENST00000596163 A0A0J9YXV3 536 aa11□□□□□ -0.65
SHKBP1-212ENST00000596163 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
SHKBP1-212ENST00000596163 ATP5LO75964 103 aa11□□□□□ -0.65
SHKBP1-212ENST00000596163 PRSS2P07478 247 aa11□□□□□ -0.65
SHKBP1-212ENST00000596163 FAT1Q14517 4588 aa10.99□□□□□ -0.65
SHKBP1-212ENST00000596163 A0A096LNI7 61 aa10.99□□□□□ -0.65
SHKBP1-212ENST00000596163 TRGC2P03986 189 aa10.99□□□□□ -0.65
SHKBP1-212ENST00000596163 BAGE3Q86Y29 109 aa10.99□□□□□ -0.65
SHKBP1-212ENST00000596163 PLAC8Q9NZF1 115 aa10.99□□□□□ -0.65
SHKBP1-212ENST00000596163 A0A096LNJ9 63 aa10.98□□□□□ -0.65
SHKBP1-212ENST00000596163 NDUFA6P56556 154 aa10.98□□□□□ -0.65
SHKBP1-212ENST00000596163 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
SHKBP1-212ENST00000596163 LINC00469Q8N7U9 141 aa10.98□□□□□ -0.65
SHKBP1-212ENST00000596163 CDKN2A-AS1Q9UH64 79 aa10.98□□□□□ -0.65
SHKBP1-212ENST00000596163 PTTG1IPP53801 180 aa10.97□□□□□ -0.65
SHKBP1-212ENST00000596163 GAGE2BQ13066 116 aa10.97□□□□□ -0.65
SHKBP1-212ENST00000596163 PMCHL1Q16048 86 aa10.97□□□□□ -0.65
SHKBP1-212ENST00000596163 PDZD11Q5EBL8 140 aa10.97□□□□□ -0.65
SHKBP1-212ENST00000596163 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
SHKBP1-212ENST00000596163 STPG4Q8N801 248 aa10.97□□□□□ -0.65
SHKBP1-212ENST00000596163 ABCA13Q86UQ4 5058 aa10.96□□□□□ -0.65
SHKBP1-212ENST00000596163 COLCA2A8K830 154 aa10.96□□□□□ -0.65
SHKBP1-212ENST00000596163 CKS1BP61024 79 aa10.96□□□□□ -0.65
SHKBP1-212ENST00000596163 UNQ6190/PRO20217Q6UXQ8 127 aa10.96□□□□□ -0.65
SHKBP1-212ENST00000596163 Q8IZM0 81 aa10.96□□□□□ -0.65
SHKBP1-212ENST00000596163 TOMM7Q9P0U1 55 aa10.96□□□□□ -0.65
SHKBP1-212ENST00000596163 TRBV30A0A0K0K1B3 111 aa10.95□□□□□ -0.66
SHKBP1-212ENST00000596163 H3BRM9 83 aa10.95□□□□□ -0.66
SHKBP1-212ENST00000596163 RPL18AQ02543 176 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-212ENST00000596163 IGLV5-45A0A087WSX0 123 aa10.94□□□□□ -0.66
SHKBP1-212ENST00000596163 HSBP1O75506 76 aa10.94□□□□□ -0.66
SHKBP1-212ENST00000596163 RPL37AP61513 92 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms