RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 APLNQ9ULZ1 77 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 CCL25O15444 150 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 LINC01556Q5JQF7 62 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 KLK12Q9UKR0 248 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 DYNC2H1Q8NCM8 4307 aaKnown RBP14.12□□□□□ -0.15
PNKP-203ENST00000593946 M0R143 59 aa14.11□□□□□ -0.15
PNKP-203ENST00000593946 SS18Q15532 418 aa14.11□□□□□ -0.15
PNKP-203ENST00000593946 BOD1L2Q8IYS8 172 aa14.11□□□□□ -0.15
PNKP-203ENST00000593946 TGP01266 2768 aa14.1□□□□□ -0.15
PNKP-203ENST00000593946 H3BRM9 83 aa14.1□□□□□ -0.15
PNKP-203ENST00000593946 TTTY13Q9BZ97 58 aa14.1□□□□□ -0.15
PNKP-203ENST00000593946 IGHV3OR16-9A0A0B4J2B5 98 aa14.1□□□□□ -0.15
PNKP-203ENST00000593946 DLEU1O43261 78 aa14.1□□□□□ -0.15
PNKP-203ENST00000593946 SPINK8P0C7L1 97 aa14.09□□□□□ -0.15
PNKP-203ENST00000593946 DNAH10OSP0CZ25 163 aa14.09□□□□□ -0.15
PNKP-203ENST00000593946 UPK3BQ9BT76 320 aa14.09□□□□□ -0.15
PNKP-203ENST00000593946 KLK5Q9Y337 293 aaPredicted RBP14.09□□□□□ -0.15
PNKP-203ENST00000593946 TRAV8-3A0A0A6YYJ7 113 aa14.08□□□□□ -0.16
PNKP-203ENST00000593946 LEPROTO15243 131 aa14.08□□□□□ -0.16
PNKP-203ENST00000593946 IGHV3-64A0A075B6Q5 118 aa14.07□□□□□ -0.16
PNKP-203ENST00000593946 IGHV1-58A0A0C4DH39 117 aa14.07□□□□□ -0.16
PNKP-203ENST00000593946 TSPEAR-AS2P59090 65 aa14.07□□□□□ -0.16
PNKP-203ENST00000593946 ENHOQ6UWT2 76 aa14.07□□□□□ -0.16
PNKP-203ENST00000593946 TENM2Q9NT68 2774 aa14.07□□□□□ -0.16
PNKP-203ENST00000593946 MAPKAPK5-AS1Q8N8E1 139 aa14.07□□□□□ -0.16
PNKP-203ENST00000593946 SMIM1B2RUZ4 78 aa14.06□□□□□ -0.16
PNKP-203ENST00000593946 J3QQQ9 107 aa14.06□□□□□ -0.16
PNKP-203ENST00000593946 SIVA1O15304 175 aa14.06□□□□□ -0.16
PNKP-203ENST00000593946 XCL1P47992 114 aa14.06□□□□□ -0.16
PNKP-203ENST00000593946 PLEKHB2Q96CS7 222 aa14.06□□□□□ -0.16
PNKP-203ENST00000593946 IGLV5-39A0A0G2JS06 123 aa14.05□□□□□ -0.16
PNKP-203ENST00000593946 CHCHD10Q8WYQ3 142 aaPredicted RBP14.05□□□□□ -0.16
PNKP-203ENST00000593946 A0A087WZ39 114 aa14.04□□□□□ -0.16
PNKP-203ENST00000593946 HNRNPA3P51991 378 aaKnown RBP14.04□□□□□ -0.16
PNKP-203ENST00000593946 IGLV10-54A0A075B6I4 117 aa14.04□□□□□ -0.16
PNKP-203ENST00000593946 CRPP02741 224 aa14.04□□□□□ -0.16
PNKP-203ENST00000593946 CD164L2Q6UWJ8 174 aa14.04□□□□□ -0.16
PNKP-203ENST00000593946 C2orf91Q6ZV80 131 aa14.04□□□□□ -0.16
PNKP-203ENST00000593946 UBE2WQ96B02 151 aa14.04□□□□□ -0.16
PNKP-203ENST00000593946 MYMXA0A1B0GTQ4 84 aa14.03□□□□□ -0.16
PNKP-203ENST00000593946 LGALS3P17931 250 aaKnown RBP14.02□□□□□ -0.16
PNKP-203ENST00000593946 TRAV8-4A0A0B4J246 113 aa14.01□□□□□ -0.17
PNKP-203ENST00000593946 ZNF815PA8K554 130 aa14.01□□□□□ -0.17
PNKP-203ENST00000593946 MIAQ16674 131 aa14.01□□□□□ -0.17
PNKP-203ENST00000593946 C5orf38Q86SI9 138 aa14.01□□□□□ -0.17
PNKP-203ENST00000593946 SNHG12Q9BXW3 62 aa14.01□□□□□ -0.17
PNKP-203ENST00000593946 EREGO14944 169 aa14.01□□□□□ -0.17
PNKP-203ENST00000593946 STARD9Q9P2P6 4700 aa14□□□□□ -0.17
PNKP-203ENST00000593946 LYSTQ99698 3801 aa14□□□□□ -0.17
PNKP-203ENST00000593946 FOXI1Q12951 378 aa13.99□□□□□ -0.17
PNKP-203ENST00000593946 LINC01561Q8N1V8 128 aa13.99□□□□□ -0.17
PNKP-203ENST00000593946 Q9H8V8 135 aa13.99□□□□□ -0.17
PNKP-203ENST00000593946 ZFAND6Q6FIF0 208 aa13.98□□□□□ -0.17
PNKP-203ENST00000593946 UBE2DNLQ8IWF7 75 aa13.98□□□□□ -0.17
PNKP-203ENST00000593946 HIGD1BQ9P298 99 aa13.98□□□□□ -0.17
PNKP-203ENST00000593946 GAGE12HA6NDE8 117 aa13.97□□□□□ -0.17
PNKP-203ENST00000593946 COX7A2LO14548 114 aa13.97□□□□□ -0.17
PNKP-203ENST00000593946 MUC7Q8TAX7 377 aa13.97□□□□□ -0.17
PNKP-203ENST00000593946 PLECQ15149 4684 aaKnown RBP13.96□□□□□ -0.17
PNKP-203ENST00000593946 IBA57-AS1B1ANH7 110 aa13.95□□□□□ -0.18
PNKP-203ENST00000593946 C10orf126Q8N4M7 172 aa13.95□□□□□ -0.18
PNKP-203ENST00000593946 NDUFA12Q9UI09 145 aa13.95□□□□□ -0.18
PNKP-203ENST00000593946 KRTAP26-1Q6PEX3 210 aa13.95□□□□□ -0.18
PNKP-203ENST00000593946 WWC2-AS2Q96NR7 200 aa13.94□□□□□ -0.18
PNKP-203ENST00000593946 K7EP13 123 aa13.93□□□□□ -0.18
PNKP-203ENST00000593946 SCGB1D4Q6XE38 83 aa13.93□□□□□ -0.18
PNKP-203ENST00000593946 COX7B2Q8TF08 81 aa13.93□□□□□ -0.18
PNKP-203ENST00000593946 NDUFA1O15239 70 aa13.93□□□□□ -0.18
PNKP-203ENST00000593946 C1orf43Q9BWL3 253 aa13.92□□□□□ -0.18
PNKP-203ENST00000593946 MALP21145 153 aa13.91□□□□□ -0.18
PNKP-203ENST00000593946 ZNF625Q96I27 306 aaPredicted RBP13.91□□□□□ -0.18
PNKP-203ENST00000593946 TOMM7Q9P0U1 55 aa13.9□□□□□ -0.18
PNKP-203ENST00000593946 A0A0J9YXY3 114 aa13.9□□□□□ -0.18
PNKP-203ENST00000593946 Q9HAA7 133 aa13.9□□□□□ -0.18
PNKP-203ENST00000593946 COL5A1-AS1Q5SY13 56 aa13.89□□□□□ -0.19
PNKP-203ENST00000593946 Q8IZM0 81 aa13.89□□□□□ -0.19
PNKP-203ENST00000593946 IGKV2D-24A0A075B6R9 120 aa13.88□□□□□ -0.19
PNKP-203ENST00000593946 ORAOV1Q8WV07 137 aa13.88□□□□□ -0.19
PNKP-203ENST00000593946 KRTAP1-5Q9BYS1 174 aa13.88□□□□□ -0.19
PNKP-203ENST00000593946 APOMO95445 188 aa13.87□□□□□ -0.19
PNKP-203ENST00000593946 HSD52Q0P140 79 aa13.87□□□□□ -0.19
PNKP-203ENST00000593946 KIAA0087Q14695 138 aa13.87□□□□□ -0.19
PNKP-203ENST00000593946 DNAH1Q9P2D7 4330 aa13.86□□□□□ -0.19
PNKP-203ENST00000593946 PRSS2P07478 247 aa13.85□□□□□ -0.19
PNKP-203ENST00000593946 HINT1P49773 126 aaPredicted RBP13.85□□□□□ -0.19
PNKP-203ENST00000593946 C6orf226Q5I0X4 101 aa13.85□□□□□ -0.19
PNKP-203ENST00000593946 HERV-K104P63124 156 aa13.84□□□□□ -0.19
PNKP-203ENST00000593946 TAL2Q16559 108 aa13.84□□□□□ -0.19
PNKP-203ENST00000593946 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
PNKP-203ENST00000593946 SFTA2Q6UW10 78 aa13.84□□□□□ -0.19
PNKP-203ENST00000593946 RMI2Q96E14 147 aa13.84□□□□□ -0.19
PNKP-203ENST00000593946 LITAFQ99732 161 aa13.84□□□□□ -0.19
PNKP-203ENST00000593946 BVES-AS1Q5T3Y7 98 aa13.83□□□□□ -0.2
PNKP-203ENST00000593946 HIST1H4GQ99525 98 aa13.83□□□□□ -0.2
PNKP-203ENST00000593946 TMEM238C9JI98 176 aa13.81□□□□□ -0.2
PNKP-203ENST00000593946 TIMM17BO60830 172 aa13.81□□□□□ -0.2
PNKP-203ENST00000593946 SPAG11BQ08648 103 aa13.81□□□□□ -0.2
PNKP-203ENST00000593946 CXCL5P42830 114 aa13.81□□□□□ -0.2
PNKP-203ENST00000593946 CASC10Q5T4H9 136 aa13.81□□□□□ -0.2
PNKP-203ENST00000593946 CFAP161Q6P656 301 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms