RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 LST1O00453 97 aa9.31□□□□□ -0.92
DNMT1-228ENST00000592705 NANOS2P60321 138 aaKnown RBP9.31□□□□□ -0.92
DNMT1-228ENST00000592705 A0A087WZ39 114 aa9.31□□□□□ -0.92
DNMT1-228ENST00000592705 A8MZ25 164 aa9.31□□□□□ -0.92
DNMT1-228ENST00000592705 UQCRQO14949 82 aa9.31□□□□□ -0.92
DNMT1-228ENST00000592705 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
DNMT1-228ENST00000592705 UBE2D1P51668 147 aa9.3□□□□□ -0.92
DNMT1-228ENST00000592705 C18orf65Q6ZTR6 163 aa9.3□□□□□ -0.92
DNMT1-228ENST00000592705 MRGPRG-AS1Q2M3A8 158 aa9.29□□□□□ -0.92
DNMT1-228ENST00000592705 HIGD2BQ4VC39 106 aa9.29□□□□□ -0.92
DNMT1-228ENST00000592705 ATP5EP2Q5VTU8 51 aa9.29□□□□□ -0.92
DNMT1-228ENST00000592705 IGLV4-69A0A075B6H9 119 aa9.28□□□□□ -0.92
DNMT1-228ENST00000592705 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
DNMT1-228ENST00000592705 BRI3O95415 125 aa9.28□□□□□ -0.92
DNMT1-228ENST00000592705 IMUPQ9GZP8 106 aa9.28□□□□□ -0.92
DNMT1-228ENST00000592705 SDIM1Q6ZPB5 146 aa9.28□□□□□ -0.92
DNMT1-228ENST00000592705 UPK3BQ9BT76 320 aa9.28□□□□□ -0.92
DNMT1-228ENST00000592705 NDUFS5O43920 106 aa9.27□□□□□ -0.93
DNMT1-228ENST00000592705 XGP55808 180 aa9.26□□□□□ -0.93
DNMT1-228ENST00000592705 C3orf22Q8N5N4 141 aa9.26□□□□□ -0.93
DNMT1-228ENST00000592705 NDUFB1O75438 58 aa9.26□□□□□ -0.93
DNMT1-228ENST00000592705 ACANP16112 2415 aa9.25□□□□□ -0.93
DNMT1-228ENST00000592705 TRAV23DV6A0A075B6W5 121 aa9.25□□□□□ -0.93
DNMT1-228ENST00000592705 SLPIP03973 132 aa9.25□□□□□ -0.93
DNMT1-228ENST00000592705 IGLV1-51P01701 117 aa9.25□□□□□ -0.93
DNMT1-228ENST00000592705 MP68P56378 58 aa9.25□□□□□ -0.93
DNMT1-228ENST00000592705 POM121L12Q8N7R1 296 aa9.24□□□□□ -0.93
DNMT1-228ENST00000592705 HIGD2AQ9BW72 106 aa9.24□□□□□ -0.93
DNMT1-228ENST00000592705 UBE2D3P61077 147 aa9.23□□□□□ -0.93
DNMT1-228ENST00000592705 UBE2D2P62837 147 aa9.23□□□□□ -0.93
DNMT1-228ENST00000592705 KRTAP24-1Q3LI83 254 aa9.23□□□□□ -0.93
DNMT1-228ENST00000592705 RETNQ9HD89 108 aa9.23□□□□□ -0.93
DNMT1-228ENST00000592705 HECTD1Q9ULT8 2610 aa9.23□□□□□ -0.93
DNMT1-228ENST00000592705 C1orf134Q5TEV5 83 aa9.23□□□□□ -0.93
DNMT1-228ENST00000592705 CDC42SE2Q9NRR3 84 aa9.22□□□□□ -0.93
DNMT1-228ENST00000592705 PRM2P04554 102 aa9.22□□□□□ -0.93
DNMT1-228ENST00000592705 EDN2P20800 178 aa9.22□□□□□ -0.93
DNMT1-228ENST00000592705 ZNF580Q9UK33 172 aa9.22□□□□□ -0.93
DNMT1-228ENST00000592705 TSPEAR-AS2P59090 65 aa9.22□□□□□ -0.93
DNMT1-228ENST00000592705 CD164L2Q6UWJ8 174 aa9.21□□□□□ -0.93
DNMT1-228ENST00000592705 LINC00959A0A1B0GUT2 108 aa9.21□□□□□ -0.94
DNMT1-228ENST00000592705 LINC01546A6NGU7 62 aa9.21□□□□□ -0.94
DNMT1-228ENST00000592705 SYCNQ0VAF6 134 aa9.21□□□□□ -0.94
DNMT1-228ENST00000592705 Q6Q795 121 aa9.21□□□□□ -0.94
DNMT1-228ENST00000592705 C6orf99Q4VX62 202 aa9.21□□□□□ -0.94
DNMT1-228ENST00000592705 LELP1Q5T871 98 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 ARHGAP32A7KAX9 2087 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 FAM240AA0A1B0GVK7 77 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 LINC00242Q5T6M2 205 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 SMIM11BQ8TCY0 68 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 ENHOQ6UWT2 76 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 CHCHD7Q9BUK0 85 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 BPY2O14599 106 aa9.2□□□□□ -0.94
DNMT1-228ENST00000592705 RAI1Q7Z5J4 1906 aaPredicted RBP9.2□□□□□ -0.94
DNMT1-228ENST00000592705 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
DNMT1-228ENST00000592705 AMELXQ99217 191 aa9.19□□□□□ -0.94
DNMT1-228ENST00000592705 LINC00474Q9P2X8 69 aa9.19□□□□□ -0.94
DNMT1-228ENST00000592705 C20orf197Q8N268 126 aa9.18□□□□□ -0.94
DNMT1-228ENST00000592705 COL4A2P08572 1712 aa9.18□□□□□ -0.94
DNMT1-228ENST00000592705 COX17Q14061 63 aa9.18□□□□□ -0.94
DNMT1-228ENST00000592705 FAM19A1Q7Z5A9 133 aa9.17□□□□□ -0.94
DNMT1-228ENST00000592705 WFDC9Q8NEX5 89 aa9.17□□□□□ -0.94
DNMT1-228ENST00000592705 WDR87Q6ZQQ6 2873 aa9.17□□□□□ -0.94
DNMT1-228ENST00000592705 SMIM1B2RUZ4 78 aa9.17□□□□□ -0.94
DNMT1-228ENST00000592705 NDUFC2O95298 119 aa9.17□□□□□ -0.94
DNMT1-228ENST00000592705 Q8IZM0 81 aa9.17□□□□□ -0.94
DNMT1-228ENST00000592705 CLUHP3Q96NS8 147 aa9.17□□□□□ -0.94
DNMT1-228ENST00000592705 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
DNMT1-228ENST00000592705 ODF3L2Q3SX64 289 aa9.16□□□□□ -0.94
DNMT1-228ENST00000592705 SERP2Q8N6R1 65 aa9.16□□□□□ -0.94
DNMT1-228ENST00000592705 MUC7Q8TAX7 377 aa9.16□□□□□ -0.94
DNMT1-228ENST00000592705 CCDC179H3BU77 68 aa9.15□□□□□ -0.94
DNMT1-228ENST00000592705 XAGE1AQ9HD64 81 aa9.15□□□□□ -0.94
DNMT1-228ENST00000592705 ADAMTS20P59510 1910 aa9.15□□□□□ -0.94
DNMT1-228ENST00000592705 FAM236DA0A1B0GTK5 79 aa9.15□□□□□ -0.94
DNMT1-228ENST00000592705 FAM236CP0DP71 79 aa9.15□□□□□ -0.94
DNMT1-228ENST00000592705 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.95
DNMT1-228ENST00000592705 USP17L23D6RBM5 183 aa9.14□□□□□ -0.95
DNMT1-228ENST00000592705 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-228ENST00000592705 FAM19A5Q7Z5A7 132 aaPredicted RBP9.14□□□□□ -0.95
DNMT1-228ENST00000592705 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
DNMT1-228ENST00000592705 Q6ZTC4 211 aa9.14□□□□□ -0.95
DNMT1-228ENST00000592705 COX7CP15954 63 aa9.14□□□□□ -0.95
DNMT1-228ENST00000592705 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
DNMT1-228ENST00000592705 Q6JHZ5 121 aa9.13□□□□□ -0.95
DNMT1-228ENST00000592705 RPL28P46779 137 aaKnown RBP9.13□□□□□ -0.95
DNMT1-228ENST00000592705 COX6A2Q02221 97 aa9.13□□□□□ -0.95
DNMT1-228ENST00000592705 M0QXV9 152 aa9.13□□□□□ -0.95
DNMT1-228ENST00000592705 BEAN1Q3B7T3 259 aa9.13□□□□□ -0.95
DNMT1-228ENST00000592705 SPATA3Q8NHX4 192 aa9.13□□□□□ -0.95
DNMT1-228ENST00000592705 ZNF706Q9Y5V0 76 aaPredicted RBP9.13□□□□□ -0.95
DNMT1-228ENST00000592705 KIF25-AS1Q9Y6Z4 181 aa9.13□□□□□ -0.95
DNMT1-228ENST00000592705 Q6ZQY7 126 aa9.12□□□□□ -0.95
DNMT1-228ENST00000592705 M0R378 163 aa9.11□□□□□ -0.95
DNMT1-228ENST00000592705 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
DNMT1-228ENST00000592705 LOC107984640A0A0U1RRK4 108 aa9.11□□□□□ -0.95
DNMT1-228ENST00000592705 C1orf158Q8N1D5 194 aa9.1□□□□□ -0.95
DNMT1-228ENST00000592705 FHL3Q13643 280 aa9.1□□□□□ -0.95
DNMT1-228ENST00000592705 A0A096LNI7 61 aa9.1□□□□□ -0.95
DNMT1-228ENST00000592705 LINC00694P0DN24 101 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms