RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 PPBPP02775 128 aa8.78□□□□□ -1
APOC1-208ENST00000592535 MAJINQ3KP22 176 aa8.78□□□□□ -1
APOC1-208ENST00000592535 CARD19Q96LW7 228 aa8.78□□□□□ -1
APOC1-208ENST00000592535 PKHD1L1Q86WI1 4243 aa8.78□□□□□ -1
APOC1-208ENST00000592535 ZNF561-AS1K7EIQ3 104 aa8.77□□□□□ -1.01
APOC1-208ENST00000592535 COX7A2LO14548 114 aa8.77□□□□□ -1.01
APOC1-208ENST00000592535 ORMDL3Q8N138 153 aa8.77□□□□□ -1.01
APOC1-208ENST00000592535 FAM104AQ969W3 186 aa8.77□□□□□ -1.01
APOC1-208ENST00000592535 LRP1Q07954 4544 aaKnown RBP8.76□□□□□ -1.01
APOC1-208ENST00000592535 MALP21145 153 aa8.76□□□□□ -1.01
APOC1-208ENST00000592535 SYCNQ0VAF6 134 aa8.76□□□□□ -1.01
APOC1-208ENST00000592535 C5orf38Q86SI9 138 aa8.76□□□□□ -1.01
APOC1-208ENST00000592535 PRELID3AQ96N28 172 aa8.76□□□□□ -1.01
APOC1-208ENST00000592535 OPRPNQ99935 248 aaPredicted RBP8.76□□□□□ -1.01
APOC1-208ENST00000592535 IGLV4-69A0A075B6H9 119 aa8.75□□□□□ -1.01
APOC1-208ENST00000592535 OXTP01178 125 aa8.75□□□□□ -1.01
APOC1-208ENST00000592535 MT-ND6P03923 174 aa8.75□□□□□ -1.01
APOC1-208ENST00000592535 STPG4Q8N801 248 aa8.75□□□□□ -1.01
APOC1-208ENST00000592535 SPANXA1Q9NS26 97 aa8.75□□□□□ -1.01
APOC1-208ENST00000592535 FAT3Q8TDW7 4589 aa8.74□□□□□ -1.01
APOC1-208ENST00000592535 MRPS36P82909 103 aaKnown RBP8.73□□□□□ -1.01
APOC1-208ENST00000592535 Q6ZRU5 148 aa8.73□□□□□ -1.01
APOC1-208ENST00000592535 PKIGQ9Y2B9 76 aa8.73□□□□□ -1.01
APOC1-208ENST00000592535 LOC389332A0A1B0GUA5 103 aa8.72□□□□□ -1.01
APOC1-208ENST00000592535 C7orf33Q8WU49 177 aa8.72□□□□□ -1.01
APOC1-208ENST00000592535 CAMK2N2Q96S95 79 aa8.72□□□□□ -1.01
APOC1-208ENST00000592535 MRPL18Q9H0U6 180 aaKnown RBP8.72□□□□□ -1.01
APOC1-208ENST00000592535 TRAPPC1Q9Y5R8 145 aa8.72□□□□□ -1.01
APOC1-208ENST00000592535 IFITM10A6NMD0 228 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 APOMO95445 188 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 TRGC2P03986 189 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 FABP9Q0Z7S8 132 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 C2orf48Q96LS8 159 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 MAP1LC3AQ9H492 121 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 LINC00474Q9P2X8 69 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 LAMTOR2Q9Y2Q5 125 aa8.71□□□□□ -1.02
APOC1-208ENST00000592535 IGHV3OR16-9A0A0B4J2B5 98 aa8.7□□□□□ -1.02
APOC1-208ENST00000592535 IFI27P40305 119 aaPredicted RBP8.7□□□□□ -1.02
APOC1-208ENST00000592535 SPAG11BQ08648 103 aa8.7□□□□□ -1.02
APOC1-208ENST00000592535 LOC107984640A0A0U1RRK4 108 aa8.69□□□□□ -1.02
APOC1-208ENST00000592535 PTTG1IPP53801 180 aa8.69□□□□□ -1.02
APOC1-208ENST00000592535 GAGE2BQ13066 116 aa8.69□□□□□ -1.02
APOC1-208ENST00000592535 KIAA1644Q3SXP7 199 aa8.69□□□□□ -1.02
APOC1-208ENST00000592535 ALKBH7Q9BT30 221 aaPredicted RBP8.69□□□□□ -1.02
APOC1-208ENST00000592535 PYGO1Q9Y3Y4 419 aa8.69□□□□□ -1.02
APOC1-208ENST00000592535 IGLV4-3A0A075B6K6 122 aa8.68□□□□□ -1.02
APOC1-208ENST00000592535 Q8N8P6 123 aa8.68□□□□□ -1.02
APOC1-208ENST00000592535 OR10D4PQ8NGN7 298 aa8.68□□□□□ -1.02
APOC1-208ENST00000592535 ORAOV1Q8WV07 137 aa8.68□□□□□ -1.02
APOC1-208ENST00000592535 A0A0J9YXV3 536 aa8.67□□□□□ -1.02
APOC1-208ENST00000592535 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
APOC1-208ENST00000592535 PRR3P79522 188 aaKnown RBP8.67□□□□□ -1.02
APOC1-208ENST00000592535 TMEM141Q96I45 108 aa8.67□□□□□ -1.02
APOC1-208ENST00000592535 LINC00242Q5T6M2 205 aa8.66□□□□□ -1.02
APOC1-208ENST00000592535 C2orf66Q6UXQ4 117 aa8.66□□□□□ -1.02
APOC1-208ENST00000592535 CYSLTR1Q9Y271 337 aa8.66□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BKO60814 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BJP06899 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BOP23527 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BBP33778 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BDP58876 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BCP62807 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 RPL18AQ02543 176 aaKnown RBP8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST2H2BEQ16778 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 RNF151Q2KHN1 245 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.65□□□□□ -1.02
APOC1-208ENST00000592535 ZC2HC1BQ5TFG8 222 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 TEX43Q6ZNM6 134 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BHQ93079 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BNQ99877 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 HIST1H2BMQ99879 126 aa8.65□□□□□ -1.02
APOC1-208ENST00000592535 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
APOC1-208ENST00000592535 MT1HL1P0DM35 61 aa8.64□□□□□ -1.03
APOC1-208ENST00000592535 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
APOC1-208ENST00000592535 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
APOC1-208ENST00000592535 MRPL35Q9NZE8 188 aaKnown RBP8.64□□□□□ -1.03
APOC1-208ENST00000592535 A0A087WZ39 114 aa8.63□□□□□ -1.03
APOC1-208ENST00000592535 F8WDY8 70 aa8.63□□□□□ -1.03
APOC1-208ENST00000592535 NDUFA1O15239 70 aa8.63□□□□□ -1.03
APOC1-208ENST00000592535 UBE2D1P51668 147 aa8.63□□□□□ -1.03
APOC1-208ENST00000592535 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
APOC1-208ENST00000592535 SERTAD4-AS1Q5TG53 156 aa8.63□□□□□ -1.03
APOC1-208ENST00000592535 C18orf32Q8TCD1 76 aa8.63□□□□□ -1.03
APOC1-208ENST00000592535 NXT2Q9NPJ8 142 aaKnown RBP8.63□□□□□ -1.03
APOC1-208ENST00000592535 IGIPA6NJ69 53 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 K7EMI3 77 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 KIAA0087Q14695 138 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 C9orf116Q5BN46 136 aaPredicted RBP8.62□□□□□ -1.03
APOC1-208ENST00000592535 COA6Q5JTJ3 125 aaKnown RBP8.62□□□□□ -1.03
APOC1-208ENST00000592535 UNQ6190/PRO20217Q6UXQ8 127 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 Q6ZN92 141 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 AMELXQ99217 191 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 C2orf88Q9BSF0 95 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 C6orf48Q9UBA6 75 aa8.62□□□□□ -1.03
APOC1-208ENST00000592535 RAB5BP61020 215 aa8.61□□□□□ -1.03
APOC1-208ENST00000592535 VCX2Q9H322 139 aa8.61□□□□□ -1.03
APOC1-208ENST00000592535 Q6ZRP5 223 aa8.6□□□□□ -1.03
APOC1-208ENST00000592535 URB1-AS1Q96HZ7 61 aa8.6□□□□□ -1.03
APOC1-208ENST00000592535 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms