RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 IGIPA6NJ69 53 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 KRTAP4-16G5E9R7 235 aaPredicted RBP3.05□□□□□ -1.92
ERCC1-216ENST00000592444 K7EMI3 77 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 CKS2P33552 79 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 TIRAPP58753 221 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 FAM74A4Q5TZK3 123 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 LYPD5Q6UWN5 251 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 SPINK6Q6UWN8 80 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 NEGR1Q7Z3B1 354 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 RPL36ALQ969Q0 106 aaKnown RBP3.05□□□□□ -1.92
ERCC1-216ENST00000592444 TMEM208Q9BTX3 173 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 KRTAP4-1Q9BYQ7 146 aa3.05□□□□□ -1.92
ERCC1-216ENST00000592444 NXT2Q9NPJ8 142 aaKnown RBP3.05□□□□□ -1.92
ERCC1-216ENST00000592444 TRBV7-3A0A075B6L6 115 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 IGHV3-73A0A0B4J1V6 119 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 MGPP08493 103 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 HTN1P15515 57 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 RHOHQ15669 191 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 ZNF56Q15929 161 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 PYY3Q5JQD4 70 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 MRPL52Q86TS9 123 aaKnown RBP3.04□□□□□ -1.92
ERCC1-216ENST00000592444 FAM19A2Q8N3H0 131 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 C20orf203Q8NBC4 194 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 OR4C5Q8NGB2 326 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 BORCS7Q96B45 105 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 TOMM6Q96B49 74 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 DNAJC30Q96LL9 226 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 MAP1LC3AQ9H492 121 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 PRO0255Q9UI72 69 aa3.04□□□□□ -1.92
ERCC1-216ENST00000592444 IGLV4-69A0A075B6H9 119 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 IBA57-AS1B1ANH7 110 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 PPP1R17O96001 155 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 NPSP0C0P6 89 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 LINC00614P0C842 121 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 C3orf79P0CE67 100 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 CHTF8P0CG12 524 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 PMCHP20382 165 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 FCER1GP30273 86 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 NDUFA6P56556 154 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 SSTP61278 116 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 RPL39P62891 51 aaKnown RBP3.03□□□□□ -1.92
ERCC1-216ENST00000592444 PMCHL1Q16048 86 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 LINC01545Q5VT33 79 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 FAM19A3Q7Z5A8 133 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 BAALCQ8WXS3 180 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 AMELXQ99217 191 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 TIMM21Q9BVV7 248 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 GTSF1LQ9H1H1 148 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 PSORS1C2Q9UIG4 136 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 UBE2D4Q9Y2X8 147 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 PYGO1Q9Y3Y4 419 aa3.03□□□□□ -1.92
ERCC1-216ENST00000592444 IGLV4-3A0A075B6K6 122 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 TRGV2A0A075B6R0 118 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 TCAPO15273 167 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 HBDP02042 147 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 AMTP48728 403 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 MRPS36P82909 103 aaKnown RBP3.02□□□□□ -1.93
ERCC1-216ENST00000592444 KRTAP26-1Q6PEX3 210 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 TEX43Q6ZNM6 134 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 TIMM17AQ99595 171 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 TM2D2Q9BX73 214 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 KRTAP2-2Q9BYT5 123 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 ST20Q9HBF5 79 aa3.02□□□□□ -1.93
ERCC1-216ENST00000592444 CSDC2Q9Y534 153 aaKnown RBP3.02□□□□□ -1.93
ERCC1-216ENST00000592444 IGLV5-45A0A087WSX0 123 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 TRBV6-8A0A0A6YYG3 113 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 I3L3M4 83 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 VCYO14598 125 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 KRTAP2-3P0C7H8 128 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 SMIM17P0DL12 118 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 FABP4P15090 132 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 CNBPP62633 177 aaKnown RBP3.01□□□□□ -1.93
ERCC1-216ENST00000592444 PRR3P79522 188 aaKnown RBP3.01□□□□□ -1.93
ERCC1-216ENST00000592444 LAGE3Q14657 143 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 JOSD1Q15040 202 aaPredicted RBP3.01□□□□□ -1.93
ERCC1-216ENST00000592444 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 RNASEKQ6P5S7 137 aaKnown RBP3.01□□□□□ -1.93
ERCC1-216ENST00000592444 C2orf66Q6UXQ4 117 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 Q6ZUT4 128 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 SMIM15Q7Z3B0 74 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 DAZ4Q86SG3 579 aaKnown RBP3.01□□□□□ -1.93
ERCC1-216ENST00000592444 PRR26Q8N8Z3 221 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 TMEM18Q96B42 140 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 KRTAP2-4Q9BYR9 128 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 DAZ3Q9NR90 486 aaKnown RBP3.01□□□□□ -1.93
ERCC1-216ENST00000592444 PRR34Q9NV39 138 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 HHLA3Q9XRX5 114 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 ICOSQ9Y6W8 199 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
ERCC1-216ENST00000592444 IGLV4-60A0A075B6I1 120 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 TRAV12-1A0A0B4J245 112 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 IGHV3-38A0A0C4DH36 116 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 LOC389332A0A1B0GUA5 103 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 A0A1B0GUV1 79 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 GAGE12JA6NER3 117 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 SYS1-DBNDD2H3BUS1 97 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 HSBP1O75506 76 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 SMIM6P0DI80 62 aa3□□□□□ -1.93
ERCC1-216ENST00000592444 RPL36AP83881 106 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms