RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 F8W036 122 aa4.8□□□□□ -1.64
NPC1-208ENST00000590301 HNRNPA3P51991 378 aaKnown RBP4.8□□□□□ -1.64
NPC1-208ENST00000590301 IFITM2Q01629 132 aa4.8□□□□□ -1.64
NPC1-208ENST00000590301 MAJINQ3KP22 176 aa4.8□□□□□ -1.64
NPC1-208ENST00000590301 PRSS3P2Q8NHM4 247 aa4.8□□□□□ -1.64
NPC1-208ENST00000590301 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
NPC1-208ENST00000590301 LRP1Q07954 4544 aaKnown RBP4.79□□□□□ -1.64
NPC1-208ENST00000590301 IGKV2-24A0A0C4DH68 120 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 SMKR1H3BMG3 65 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 COX7A2LO14548 114 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 PHOX2AO14813 284 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 PPBPP02775 128 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 CKS2P33552 79 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 SYCNQ0VAF6 134 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 MRPL51Q4U2R6 128 aaKnown RBP4.79□□□□□ -1.64
NPC1-208ENST00000590301 STPG4Q8N801 248 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 UBE2D4Q9Y2X8 147 aa4.79□□□□□ -1.64
NPC1-208ENST00000590301 A0A096LNI7 61 aa4.78□□□□□ -1.64
NPC1-208ENST00000590301 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
NPC1-208ENST00000590301 APOMO95445 188 aa4.78□□□□□ -1.64
NPC1-208ENST00000590301 SNRPEP62304 92 aaKnown RBP4.78□□□□□ -1.64
NPC1-208ENST00000590301 HBBP68871 147 aa4.78□□□□□ -1.64
NPC1-208ENST00000590301 PRR3P79522 188 aaKnown RBP4.78□□□□□ -1.64
NPC1-208ENST00000590301 C2orf48Q96LS8 159 aa4.78□□□□□ -1.64
NPC1-208ENST00000590301 SPANXA1Q9NS26 97 aa4.78□□□□□ -1.64
NPC1-208ENST00000590301 FAT3Q8TDW7 4589 aa4.77□□□□□ -1.65
NPC1-208ENST00000590301 IGLV4-69A0A075B6H9 119 aa4.77□□□□□ -1.65
NPC1-208ENST00000590301 LOC107984640A0A0U1RRK4 108 aa4.77□□□□□ -1.65
NPC1-208ENST00000590301 A0A1B0GXF2 115 aa4.77□□□□□ -1.65
NPC1-208ENST00000590301 F8WDY8 70 aa4.77□□□□□ -1.65
NPC1-208ENST00000590301 ATP5L2Q7Z4Y8 100 aa4.77□□□□□ -1.65
NPC1-208ENST00000590301 SMIM2Q9BVW6 85 aa4.77□□□□□ -1.65
NPC1-208ENST00000590301 TRAV13-1A0A0B4J241 112 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 MRPS36P82909 103 aaKnown RBP4.76□□□□□ -1.65
NPC1-208ENST00000590301 CLLU1Q5K131 121 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 Q6ZUT4 128 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 OR10D4PQ8NGN7 298 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 CAMK2N2Q96S95 79 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 PKHD1L1Q86WI1 4243 aa4.76□□□□□ -1.65
NPC1-208ENST00000590301 D6R8Y8 96 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 RAB5AP20339 215 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 LINC00310P59036 64 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 PNRC1Q12796 327 aaPredicted RBP4.75□□□□□ -1.65
NPC1-208ENST00000590301 MRPL54Q6P161 138 aaKnown RBP4.75□□□□□ -1.65
NPC1-208ENST00000590301 REG3GQ6UW15 175 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 SPINK6Q6UWN8 80 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 Q6ZRP5 223 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 ORMDL3Q8N138 153 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 LINC00526Q96FQ7 95 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 LAMTOR2Q9Y2Q5 125 aa4.75□□□□□ -1.65
NPC1-208ENST00000590301 ADCYAP1P18509 176 aa4.74□□□□□ -1.65
NPC1-208ENST00000590301 SPAG11BQ08648 103 aa4.74□□□□□ -1.65
NPC1-208ENST00000590301 RNASE13Q5GAN3 156 aaKnown RBP4.74□□□□□ -1.65
NPC1-208ENST00000590301 C5orf38Q86SI9 138 aa4.74□□□□□ -1.65
NPC1-208ENST00000590301 LINC01600Q96MT4 127 aa4.74□□□□□ -1.65
NPC1-208ENST00000590301 MRPL35Q9NZE8 188 aaKnown RBP4.74□□□□□ -1.65
NPC1-208ENST00000590301 PYGO1Q9Y3Y4 419 aa4.74□□□□□ -1.65
NPC1-208ENST00000590301 UBR4Q5T4S7 5183 aa4.74□□□□□ -1.65
NPC1-208ENST00000590301 TGIF2-C20orf24A0A0A6YYL0 155 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 IGHV3OR16-9A0A0B4J2B5 98 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 IFITM10A6NMD0 228 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 NPYP01303 97 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 IFI27P40305 119 aaPredicted RBP4.73□□□□□ -1.65
NPC1-208ENST00000590301 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
NPC1-208ENST00000590301 GAGE2BQ13066 116 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 TMEM136Q6ZRR5 245 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 PRELID3AQ96N28 172 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 IMMP2LQ96T52 175 aa4.73□□□□□ -1.65
NPC1-208ENST00000590301 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.72□□□□□ -1.65
NPC1-208ENST00000590301 K7EMI3 77 aa4.72□□□□□ -1.65
NPC1-208ENST00000590301 NDUFA1O15239 70 aa4.72□□□□□ -1.65
NPC1-208ENST00000590301 ATP6V1G1O75348 118 aa4.72□□□□□ -1.65
NPC1-208ENST00000590301 MT-ND4LP03901 98 aa4.72□□□□□ -1.65
NPC1-208ENST00000590301 RAB14P61106 215 aa4.72□□□□□ -1.65
NPC1-208ENST00000590301 SRSF9Q13242 221 aaKnown RBP eCLIP4.72□□□□□ -1.65
NPC1-208ENST00000590301 ORAOV1Q8WV07 137 aa4.72□□□□□ -1.65
NPC1-208ENST00000590301 A0A087WZ39 114 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 A0A0J9YXV3 536 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 TLX1NBP0CAT3 122 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 RPL18AQ02543 176 aaKnown RBP4.71□□□□□ -1.66
NPC1-208ENST00000590301 UBE2V1Q13404 147 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 GAGE2EQ4V326 116 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 C9orf116Q5BN46 136 aaPredicted RBP4.71□□□□□ -1.66
NPC1-208ENST00000590301 GAGE2AQ6NT46 116 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 LINC01561Q8N1V8 128 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 FAM104AQ969W3 186 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 TMEM141Q96I45 108 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 KRTAP9-9Q9BYP9 154 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 KRTAP9-4Q9BYQ2 154 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 MAP1LC3AQ9H492 121 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 GAGE2DQ9UEU5 116 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 PAM16Q9Y3D7 125 aa4.71□□□□□ -1.66
NPC1-208ENST00000590301 IGLV4-3A0A075B6K6 122 aa4.7□□□□□ -1.66
NPC1-208ENST00000590301 A0A1W2PNN7 141 aa4.7□□□□□ -1.66
NPC1-208ENST00000590301 TMEM218A2RU14 115 aa4.7□□□□□ -1.66
NPC1-208ENST00000590301 MT-ND6P03923 174 aa4.7□□□□□ -1.66
NPC1-208ENST00000590301 G0S2P27469 103 aa4.7□□□□□ -1.66
NPC1-208ENST00000590301 ORMDL2Q53FV1 153 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms