RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 IMMP2LQ96T52 175 aa11.41□□□□□ -0.58
CIRBP-227ENST00000590188 SEC11CQ9BY50 192 aa11.41□□□□□ -0.58
CIRBP-227ENST00000590188 LRP1Q07954 4544 aaKnown RBP11.4□□□□□ -0.58
CIRBP-227ENST00000590188 STPG4Q8N801 248 aa11.4□□□□□ -0.58
CIRBP-227ENST00000590188 CAMK2N2Q96S95 79 aa11.4□□□□□ -0.58
CIRBP-227ENST00000590188 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.58
CIRBP-227ENST00000590188 IGLV4-3A0A075B6K6 122 aa11.39□□□□□ -0.59
CIRBP-227ENST00000590188 APOMO95445 188 aa11.39□□□□□ -0.59
CIRBP-227ENST00000590188 SPAG11BQ08648 103 aa11.39□□□□□ -0.59
CIRBP-227ENST00000590188 ZC2HC1BQ5TFG8 222 aa11.39□□□□□ -0.59
CIRBP-227ENST00000590188 GAGE2BQ13066 116 aa11.38□□□□□ -0.59
CIRBP-227ENST00000590188 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
CIRBP-227ENST00000590188 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
CIRBP-227ENST00000590188 S100PP25815 95 aa11.37□□□□□ -0.59
CIRBP-227ENST00000590188 TMEM141Q96I45 108 aa11.37□□□□□ -0.59
CIRBP-227ENST00000590188 CYSLTR1Q9Y271 337 aa11.37□□□□□ -0.59
CIRBP-227ENST00000590188 PYGO1Q9Y3Y4 419 aa11.37□□□□□ -0.59
CIRBP-227ENST00000590188 DMBT1Q9UGM3 2413 aaPredicted RBP11.36□□□□□ -0.59
CIRBP-227ENST00000590188 IGHV3OR16-9A0A0B4J2B5 98 aa11.36□□□□□ -0.59
CIRBP-227ENST00000590188 A0A0J9YXV3 536 aa11.36□□□□□ -0.59
CIRBP-227ENST00000590188 ORMDL2Q53FV1 153 aa11.36□□□□□ -0.59
CIRBP-227ENST00000590188 TRAV9-1A0A075B6T8 112 aa11.35□□□□□ -0.59
CIRBP-227ENST00000590188 KRTAP29-1A8MX34 341 aaPredicted RBP11.35□□□□□ -0.59
CIRBP-227ENST00000590188 TEX43Q6ZNM6 134 aa11.35□□□□□ -0.59
CIRBP-227ENST00000590188 C7orf33Q8WU49 177 aa11.35□□□□□ -0.59
CIRBP-227ENST00000590188 PKIGQ9Y2B9 76 aa11.35□□□□□ -0.59
CIRBP-227ENST00000590188 TGIF2-C20orf24A0A0A6YYL0 155 aa11.34□□□□□ -0.59
CIRBP-227ENST00000590188 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
CIRBP-227ENST00000590188 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
CIRBP-227ENST00000590188 C2orf48Q96LS8 159 aa11.34□□□□□ -0.59
CIRBP-227ENST00000590188 NXT2Q9NPJ8 142 aaKnown RBP11.34□□□□□ -0.59
CIRBP-227ENST00000590188 RPS10P5Q9NQ39 176 aa11.34□□□□□ -0.59
CIRBP-227ENST00000590188 PTTG1IPP53801 180 aa11.33□□□□□ -0.6
CIRBP-227ENST00000590188 RPL18AQ02543 176 aaKnown RBP11.33□□□□□ -0.6
CIRBP-227ENST00000590188 LINC00242Q5T6M2 205 aa11.33□□□□□ -0.6
CIRBP-227ENST00000590188 Q6ZN92 141 aa11.33□□□□□ -0.6
CIRBP-227ENST00000590188 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
CIRBP-227ENST00000590188 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.32□□□□□ -0.6
CIRBP-227ENST00000590188 C10orf91Q5T1B1 145 aa11.32□□□□□ -0.6
CIRBP-227ENST00000590188 C2orf88Q9BSF0 95 aa11.32□□□□□ -0.6
CIRBP-227ENST00000590188 UBE2D1P51668 147 aa11.31□□□□□ -0.6
CIRBP-227ENST00000590188 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
CIRBP-227ENST00000590188 GNB1LQ9BYB4 327 aa11.31□□□□□ -0.6
CIRBP-227ENST00000590188 VCX2Q9H322 139 aa11.31□□□□□ -0.6
CIRBP-227ENST00000590188 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
CIRBP-227ENST00000590188 RHEBQ15382 184 aa11.3□□□□□ -0.6
CIRBP-227ENST00000590188 C10orf25Q5T742 122 aa11.3□□□□□ -0.6
CIRBP-227ENST00000590188 A0A087WZ39 114 aa11.29□□□□□ -0.6
CIRBP-227ENST00000590188 IGIPA6NJ69 53 aa11.29□□□□□ -0.6
CIRBP-227ENST00000590188 K7EMI3 77 aa11.29□□□□□ -0.6
CIRBP-227ENST00000590188 NDUFA1O15239 70 aa11.29□□□□□ -0.6
CIRBP-227ENST00000590188 UNQ6190/PRO20217Q6UXQ8 127 aa11.29□□□□□ -0.6
CIRBP-227ENST00000590188 AMELXQ99217 191 aa11.29□□□□□ -0.6
CIRBP-227ENST00000590188 MRPL18Q9H0U6 180 aaKnown RBP11.29□□□□□ -0.6
CIRBP-227ENST00000590188 FABP9Q0Z7S8 132 aa11.28□□□□□ -0.6
CIRBP-227ENST00000590188 ALKBH7Q9BT30 221 aaPredicted RBP11.28□□□□□ -0.6
CIRBP-227ENST00000590188 A0A1W2PNN7 141 aa11.27□□□□□ -0.61
CIRBP-227ENST00000590188 OXTP01178 125 aa11.27□□□□□ -0.61
CIRBP-227ENST00000590188 TOMM6Q96B49 74 aa11.27□□□□□ -0.61
CIRBP-227ENST00000590188 MRPL35Q9NZE8 188 aaKnown RBP11.27□□□□□ -0.61
CIRBP-227ENST00000590188 APOC3P02656 99 aa11.26□□□□□ -0.61
CIRBP-227ENST00000590188 PRR3P79522 188 aaKnown RBP11.26□□□□□ -0.61
CIRBP-227ENST00000590188 C6orf48Q9UBA6 75 aa11.26□□□□□ -0.61
CIRBP-227ENST00000590188 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
CIRBP-227ENST00000590188 RNF151Q2KHN1 245 aa11.25□□□□□ -0.61
CIRBP-227ENST00000590188 COX19Q49B96 90 aa11.25□□□□□ -0.61
CIRBP-227ENST00000590188 C9orf116Q5BN46 136 aaPredicted RBP11.25□□□□□ -0.61
CIRBP-227ENST00000590188 C2orf82Q6UX34 121 aa11.25□□□□□ -0.61
CIRBP-227ENST00000590188 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
CIRBP-227ENST00000590188 TIMM17AQ99595 171 aa11.25□□□□□ -0.61
CIRBP-227ENST00000590188 MT-ND6P03923 174 aa11.24□□□□□ -0.61
CIRBP-227ENST00000590188 G0S2P27469 103 aa11.24□□□□□ -0.61
CIRBP-227ENST00000590188 TOMM7Q9P0U1 55 aa11.24□□□□□ -0.61
CIRBP-227ENST00000590188 F8WDY8 70 aa11.23□□□□□ -0.61
CIRBP-227ENST00000590188 NPSP0C0P6 89 aa11.23□□□□□ -0.61
CIRBP-227ENST00000590188 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
CIRBP-227ENST00000590188 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
CIRBP-227ENST00000590188 GAGE2DQ9UEU5 116 aa11.23□□□□□ -0.61
CIRBP-227ENST00000590188 PAPPA-AS1Q5QFB9 102 aa11.22□□□□□ -0.61
CIRBP-227ENST00000590188 Q6ZRP5 223 aa11.22□□□□□ -0.61
CIRBP-227ENST00000590188 SMCO4Q9NRQ5 59 aa11.22□□□□□ -0.61
CIRBP-227ENST00000590188 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.61
CIRBP-227ENST00000590188 ERASQ7Z444 233 aa11.21□□□□□ -0.61
CIRBP-227ENST00000590188 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
CIRBP-227ENST00000590188 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
CIRBP-227ENST00000590188 TRAPPC1Q9Y5R8 145 aa11.21□□□□□ -0.61
CIRBP-227ENST00000590188 FAM168BA1KXE4 195 aa11.2□□□□□ -0.62
CIRBP-227ENST00000590188 PRSS2P07478 247 aa11.2□□□□□ -0.62
CIRBP-227ENST00000590188 HERVK_113P63121 156 aa11.2□□□□□ -0.62
CIRBP-227ENST00000590188 NDUFA5Q16718 116 aa11.2□□□□□ -0.62
CIRBP-227ENST00000590188 FAM19A3Q7Z5A8 133 aa11.2□□□□□ -0.62
CIRBP-227ENST00000590188 LINC01561Q8N1V8 128 aa11.2□□□□□ -0.62
CIRBP-227ENST00000590188 LINC01546A6NGU7 62 aa11.19□□□□□ -0.62
CIRBP-227ENST00000590188 SNAPINO95295 136 aa11.19□□□□□ -0.62
CIRBP-227ENST00000590188 SVBPQ8N300 66 aa11.19□□□□□ -0.62
CIRBP-227ENST00000590188 PACRGQ96M98 296 aaPredicted RBP11.19□□□□□ -0.62
CIRBP-227ENST00000590188 TLX1NBP0CAT3 122 aa11.18□□□□□ -0.62
CIRBP-227ENST00000590188 FAM19A5Q7Z5A7 132 aaPredicted RBP11.18□□□□□ -0.62
CIRBP-227ENST00000590188 SLC7A5P1Q8MH63 180 aa11.18□□□□□ -0.62
CIRBP-227ENST00000590188 LINC00469Q8N7U9 141 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms