RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CNBPP62633 177 aaKnown RBP13.84□□□□□ -0.19
ATG4D-212ENST00000590096 C5orf38Q86SI9 138 aa13.84□□□□□ -0.19
ATG4D-212ENST00000590096 SCO1O75880 301 aa13.83□□□□□ -0.2
ATG4D-212ENST00000590096 APOMO95445 188 aa13.83□□□□□ -0.2
ATG4D-212ENST00000590096 UBE2D1P51668 147 aa13.83□□□□□ -0.2
ATG4D-212ENST00000590096 ZC2HC1BQ5TFG8 222 aa13.83□□□□□ -0.2
ATG4D-212ENST00000590096 LINC00173Q6ZV60 143 aa13.83□□□□□ -0.2
ATG4D-212ENST00000590096 ZNF561-AS1K7EIQ3 104 aa13.82□□□□□ -0.2
ATG4D-212ENST00000590096 HBDP02042 147 aa13.82□□□□□ -0.2
ATG4D-212ENST00000590096 C9orf163Q8N9P6 203 aa13.82□□□□□ -0.2
ATG4D-212ENST00000590096 ABCA13Q86UQ4 5058 aa13.82□□□□□ -0.2
ATG4D-212ENST00000590096 IGHV3OR16-9A0A0B4J2B5 98 aa13.81□□□□□ -0.2
ATG4D-212ENST00000590096 LINC00242Q5T6M2 205 aa13.81□□□□□ -0.2
ATG4D-212ENST00000590096 CHCHD1Q96BP2 118 aaKnown RBP13.8□□□□□ -0.2
ATG4D-212ENST00000590096 DNAH8Q96JB1 4490 aa13.8□□□□□ -0.2
ATG4D-212ENST00000590096 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.79□□□□□ -0.2
ATG4D-212ENST00000590096 SLPIP03973 132 aa13.79□□□□□ -0.2
ATG4D-212ENST00000590096 PMCHL1Q16048 86 aa13.79□□□□□ -0.2
ATG4D-212ENST00000590096 BAGE3Q86Y29 109 aa13.79□□□□□ -0.2
ATG4D-212ENST00000590096 A0A096LNJ9 63 aa13.78□□□□□ -0.2
ATG4D-212ENST00000590096 SEC11AP67812 179 aa13.78□□□□□ -0.2
ATG4D-212ENST00000590096 COX6A2Q02221 97 aa13.78□□□□□ -0.2
ATG4D-212ENST00000590096 LINC00526Q96FQ7 95 aa13.77□□□□□ -0.21
ATG4D-212ENST00000590096 FAM30AQ9NZY2 134 aa13.77□□□□□ -0.21
ATG4D-212ENST00000590096 HSPG2P98160 4391 aa13.76□□□□□ -0.21
ATG4D-212ENST00000590096 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
ATG4D-212ENST00000590096 XGP55808 180 aa13.76□□□□□ -0.21
ATG4D-212ENST00000590096 FAM19A3Q7Z5A8 133 aa13.76□□□□□ -0.21
ATG4D-212ENST00000590096 OR10D4PQ8NGN7 298 aa13.76□□□□□ -0.21
ATG4D-212ENST00000590096 A0A087WZ39 114 aa13.75□□□□□ -0.21
ATG4D-212ENST00000590096 HERVK_113P63121 156 aa13.75□□□□□ -0.21
ATG4D-212ENST00000590096 SPAG11BQ08648 103 aa13.75□□□□□ -0.21
ATG4D-212ENST00000590096 PMVKQ15126 192 aa13.75□□□□□ -0.21
ATG4D-212ENST00000590096 Q6ZSA8 131 aa13.75□□□□□ -0.21
ATG4D-212ENST00000590096 ORAOV1Q8WV07 137 aa13.75□□□□□ -0.21
ATG4D-212ENST00000590096 GEMIN7Q9H840 131 aaKnown RBP13.75□□□□□ -0.21
ATG4D-212ENST00000590096 IGLV4-69A0A075B6H9 119 aa13.74□□□□□ -0.21
ATG4D-212ENST00000590096 ATP5LO75964 103 aa13.74□□□□□ -0.21
ATG4D-212ENST00000590096 S100A1P23297 94 aa13.74□□□□□ -0.21
ATG4D-212ENST00000590096 PDZD11Q5EBL8 140 aa13.74□□□□□ -0.21
ATG4D-212ENST00000590096 CST9LQ9H4G1 147 aa13.74□□□□□ -0.21
ATG4D-212ENST00000590096 HSBP1O75506 76 aa13.73□□□□□ -0.21
ATG4D-212ENST00000590096 SYCNQ0VAF6 134 aa13.73□□□□□ -0.21
ATG4D-212ENST00000590096 CARD19Q96LW7 228 aa13.73□□□□□ -0.21
ATG4D-212ENST00000590096 A0A0J9YXV3 536 aa13.72□□□□□ -0.21
ATG4D-212ENST00000590096 NDUFA6P56556 154 aa13.72□□□□□ -0.21
ATG4D-212ENST00000590096 HAMPP81172 84 aa13.72□□□□□ -0.21
ATG4D-212ENST00000590096 SDIM1Q6ZPB5 146 aa13.72□□□□□ -0.21
ATG4D-212ENST00000590096 LINC01561Q8N1V8 128 aa13.72□□□□□ -0.21
ATG4D-212ENST00000590096 C2orf48Q96LS8 159 aa13.72□□□□□ -0.21
ATG4D-212ENST00000590096 CAMK2N2Q96S95 79 aa13.72□□□□□ -0.21
ATG4D-212ENST00000590096 TINCRA0A1B0GVN0 87 aa13.7□□□□□ -0.22
ATG4D-212ENST00000590096 ATP6V1G1O75348 118 aa13.7□□□□□ -0.22
ATG4D-212ENST00000590096 LINC00469Q8N7U9 141 aa13.69□□□□□ -0.22
ATG4D-212ENST00000590096 PACRGQ96M98 296 aaPredicted RBP13.69□□□□□ -0.22
ATG4D-212ENST00000590096 CDKN2A-AS1Q9UH64 79 aa13.69□□□□□ -0.22
ATG4D-212ENST00000590096 PKIGQ9Y2B9 76 aa13.69□□□□□ -0.22
ATG4D-212ENST00000590096 F8WDY8 70 aa13.68□□□□□ -0.22
ATG4D-212ENST00000590096 SERF1AO75920 110 aa13.68□□□□□ -0.22
ATG4D-212ENST00000590096 CHAC1Q9BUX1 264 aa13.68□□□□□ -0.22
ATG4D-212ENST00000590096 Q6ZRU5 148 aa13.67□□□□□ -0.22
ATG4D-212ENST00000590096 FAM19A2Q8N3H0 131 aa13.67□□□□□ -0.22
ATG4D-212ENST00000590096 NDUFA1O15239 70 aa13.66□□□□□ -0.22
ATG4D-212ENST00000590096 SCXQ7RTU7 201 aa13.66□□□□□ -0.22
ATG4D-212ENST00000590096 KRTAP4-5Q9BYR2 181 aa13.66□□□□□ -0.22
ATG4D-212ENST00000590096 PRSS2P07478 247 aa13.65□□□□□ -0.22
ATG4D-212ENST00000590096 Q8N1X5 172 aa13.65□□□□□ -0.22
ATG4D-212ENST00000590096 IFI27L1Q96BM0 104 aa13.65□□□□□ -0.22
ATG4D-212ENST00000590096 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.65□□□□□ -0.22
ATG4D-212ENST00000590096 LINC00310P59036 64 aa13.64□□□□□ -0.23
ATG4D-212ENST00000590096 TOMM7Q9P0U1 55 aa13.64□□□□□ -0.23
ATG4D-212ENST00000590096 IGLV5-45A0A087WSX0 123 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BKO60814 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 SMR3BP02814 79 aaPredicted RBP13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BJP06899 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 IGLC3P0DOY3 106 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BOP23527 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BBP33778 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BDP58876 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BCP62807 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 KIAA0087Q14695 138 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST2H2BEQ16778 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.63□□□□□ -0.23
ATG4D-212ENST00000590096 CIRBP-AS1Q8TBR5 109 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BHQ93079 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 DPH3Q96FX2 82 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BNQ99877 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 HIST1H2BMQ99879 126 aa13.63□□□□□ -0.23
ATG4D-212ENST00000590096 IGKV2-24A0A0C4DH68 120 aa13.62□□□□□ -0.23
ATG4D-212ENST00000590096 H3BRM9 83 aa13.62□□□□□ -0.23
ATG4D-212ENST00000590096 MRPL35Q9NZE8 188 aaKnown RBP13.62□□□□□ -0.23
ATG4D-212ENST00000590096 LOC107984640A0A0U1RRK4 108 aa13.61□□□□□ -0.23
ATG4D-212ENST00000590096 PANO1I0J062 215 aa13.61□□□□□ -0.23
ATG4D-212ENST00000590096 LEPROTL1O95214 131 aa13.61□□□□□ -0.23
ATG4D-212ENST00000590096 CHTF8P0CG12 524 aa13.61□□□□□ -0.23
ATG4D-212ENST00000590096 RNF151Q2KHN1 245 aa13.61□□□□□ -0.23
ATG4D-212ENST00000590096 NUPR1O60356 82 aa13.6□□□□□ -0.23
ATG4D-212ENST00000590096 CIRBPQ14011 172 aaKnown RBP13.6□□□□□ -0.23
ATG4D-212ENST00000590096 C6orf226Q5I0X4 101 aa13.6□□□□□ -0.23
ATG4D-212ENST00000590096 UNQ6190/PRO20217Q6UXQ8 127 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms