RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 SPTSSAQ969W0 71 aa2.72□□□□□ -1.97
VMP1-208ENST00000588617 IER3IP1Q9Y5U9 82 aa2.72□□□□□ -1.97
VMP1-208ENST00000588617 ZNF292O60281 2723 aa2.72□□□□□ -1.97
VMP1-208ENST00000588617 NCOR1O75376 2440 aa2.72□□□□□ -1.97
VMP1-208ENST00000588617 TRAV1-2A0A0B4J238 106 aa2.71□□□□□ -1.98
VMP1-208ENST00000588617 CCKP06307 115 aa2.71□□□□□ -1.98
VMP1-208ENST00000588617 LINC01590Q5TEZ4 76 aa2.71□□□□□ -1.98
VMP1-208ENST00000588617 SEC11CQ9BY50 192 aa2.71□□□□□ -1.98
VMP1-208ENST00000588617 RP1L1Q8IWN7 2480 aaPredicted RBP2.71□□□□□ -1.98
VMP1-208ENST00000588617 KNL1Q8NG31 2342 aa2.7□□□□□ -1.98
VMP1-208ENST00000588617 CACNA1HO95180 2353 aa2.7□□□□□ -1.98
VMP1-208ENST00000588617 SNRNP200O75643 2136 aaKnown RBP2.7□□□□□ -1.98
VMP1-208ENST00000588617 SNCGO76070 127 aa2.7□□□□□ -1.98
VMP1-208ENST00000588617 PPP3R1P63098 170 aa2.7□□□□□ -1.98
VMP1-208ENST00000588617 C10orf128Q5T292 105 aa2.7□□□□□ -1.98
VMP1-208ENST00000588617 PROK2Q9HC23 129 aa2.7□□□□□ -1.98
VMP1-208ENST00000588617 LAMA5O15230 3695 aa2.7□□□□□ -1.98
VMP1-208ENST00000588617 NCOA6Q14686 2063 aaPredicted RBP2.7□□□□□ -1.98
VMP1-208ENST00000588617 ZFHX4Q86UP3 3567 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 LOC101927531A0A1B0GV80 90 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 APOC1P02654 83 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 FGF7P21781 194 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 TMEM203Q969S6 136 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 ABRACLQ9P1F3 81 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 FRYQ5TBA9 3013 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 SPENQ96T58 3664 aaKnown RBP2.69□□□□□ -1.98
VMP1-208ENST00000588617 LOC400499M0QZD8 3231 aa2.69□□□□□ -1.98
VMP1-208ENST00000588617 CELSR3Q9NYQ7 3312 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 OTOGLQ3ZCN5 2332 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 PDCD5O14737 125 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 EFNA4P52798 201 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 MRPS10P82664 201 aaKnown RBP2.68□□□□□ -1.98
VMP1-208ENST00000588617 Q6ZQY7 126 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 DEFB124Q8NES8 71 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 GNG8Q9UK08 70 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 R4GMQ9 66 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 V9GYH0 126 aa2.68□□□□□ -1.98
VMP1-208ENST00000588617 GOLGA4Q13439 2230 aaKnown RBP2.67□□□□□ -1.98
VMP1-208ENST00000588617 ASXL3Q9C0F0 2248 aa2.67□□□□□ -1.98
VMP1-208ENST00000588617 NDUFB6O95139 128 aa2.67□□□□□ -1.98
VMP1-208ENST00000588617 AKAIN1P0CW23 69 aa2.67□□□□□ -1.98
VMP1-208ENST00000588617 AGPAT4-IT1Q9H0P7 198 aa2.67□□□□□ -1.98
VMP1-208ENST00000588617 DCHS1Q96JQ0 3298 aa2.67□□□□□ -1.98
VMP1-208ENST00000588617 BOD1L1Q8NFC6 3051 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 SPAARA0A1B0GVQ0 90 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 PIN1P1O15428 100 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 SSBP1Q04837 148 aaKnown RBP2.66□□□□□ -1.98
VMP1-208ENST00000588617 RPL7L1Q6DKI1 246 aaKnown RBP2.66□□□□□ -1.98
VMP1-208ENST00000588617 PP6455Q8WZ26 134 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 TMEM141Q96I45 108 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 RERGLQ9H628 205 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 FAIMQ9NVQ4 179 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 PI4KAP42356 2102 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 GVINP1Q7Z2Y8 2422 aa2.66□□□□□ -1.98
VMP1-208ENST00000588617 BSNQ9UPA5 3926 aa2.65□□□□□ -1.98
VMP1-208ENST00000588617 ASCC3Q8N3C0 2202 aaKnown RBP2.65□□□□□ -1.98
VMP1-208ENST00000588617 MRPL33O75394 65 aaKnown RBP2.65□□□□□ -1.99
VMP1-208ENST00000588617 TRAPPC2P0DI81 140 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 TRAPPC2BP0DI82 140 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 INSL4Q14641 139 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 FXYD3Q14802 87 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 Q86TA4 180 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 NDUFA11Q86Y39 141 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 SMIM4Q8WVI0 70 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 IFI27L1Q96BM0 104 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 S100A16Q96FQ6 103 aaKnown RBP2.65□□□□□ -1.99
VMP1-208ENST00000588617 MUC6Q6W4X9 2439 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 DMXL2Q8TDJ6 3036 aa2.65□□□□□ -1.99
VMP1-208ENST00000588617 NBDYA0A0U1RRE5 68 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 NAP1L6A6NFF2 107 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 M0R135 149 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 SPTBP11277 2137 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 FAUP35544 74 aaKnown RBP2.64□□□□□ -1.99
VMP1-208ENST00000588617 RPS27P42677 84 aaKnown RBP2.64□□□□□ -1.99
VMP1-208ENST00000588617 Q6ZS92 163 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 FDCSPQ8NFU4 85 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 NAA60Q9H7X0 242 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 V9GYS6 101 aa2.64□□□□□ -1.99
VMP1-208ENST00000588617 EP300Q09472 2414 aaPredicted RBP2.64□□□□□ -1.99
VMP1-208ENST00000588617 AHCTF1Q8WYP5 2266 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 ATMQ13315 3056 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 CEP295Q9C0D2 2601 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 A6NIN4 97 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 TMEM14DPA8MWL7 114 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 SNAPC5O75971 98 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 CAV3P56539 151 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 LINC00575Q6W349 94 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 TOMM5Q8N4H5 51 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 TSKUQ8WUA8 353 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 CCL19Q99731 98 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 TTTY10Q9BZA0 68 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 PRRC2CQ9Y520 2896 aaKnown RBP2.63□□□□□ -1.99
VMP1-208ENST00000588617 ZZEF1O43149 2961 aa2.63□□□□□ -1.99
VMP1-208ENST00000588617 FLG2Q5D862 2391 aaPredicted RBP2.63□□□□□ -1.99
VMP1-208ENST00000588617 F6UZH7 168 aa2.62□□□□□ -1.99
VMP1-208ENST00000588617 RBP2P50120 134 aa2.62□□□□□ -1.99
VMP1-208ENST00000588617 DEFB109BQ30KR1 87 aa2.62□□□□□ -1.99
VMP1-208ENST00000588617 S100A7L2Q5SY68 101 aa2.62□□□□□ -1.99
VMP1-208ENST00000588617 SERP1Q9Y6X1 66 aa2.62□□□□□ -1.99
VMP1-208ENST00000588617 MGAQ8IWI9 3026 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms