RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 FABP9Q0Z7S8 132 aa12.31□□□□□ -0.44
CIRBP-217ENST00000588230 PRSS3P2Q8NHM4 247 aa12.31□□□□□ -0.44
CIRBP-217ENST00000588230 DPH3Q96FX2 82 aa12.31□□□□□ -0.44
CIRBP-217ENST00000588230 TMEM141Q96I45 108 aa12.31□□□□□ -0.44
CIRBP-217ENST00000588230 MRPL18Q9H0U6 180 aaKnown RBP12.31□□□□□ -0.44
CIRBP-217ENST00000588230 APOMO95445 188 aa12.3□□□□□ -0.44
CIRBP-217ENST00000588230 G0S2P27469 103 aa12.3□□□□□ -0.44
CIRBP-217ENST00000588230 ALKBH7Q9BT30 221 aaPredicted RBP12.3□□□□□ -0.44
CIRBP-217ENST00000588230 PLA2G1BP04054 148 aaKnown RBP12.29□□□□□ -0.44
CIRBP-217ENST00000588230 TGIF2-C20orf24A0A0A6YYL0 155 aa12.28□□□□□ -0.44
CIRBP-217ENST00000588230 PANO1I0J062 215 aa12.28□□□□□ -0.44
CIRBP-217ENST00000588230 COX6A2Q02221 97 aa12.28□□□□□ -0.44
CIRBP-217ENST00000588230 Q6ZN92 141 aa12.28□□□□□ -0.44
CIRBP-217ENST00000588230 TEX43Q6ZNM6 134 aa12.28□□□□□ -0.44
CIRBP-217ENST00000588230 CARD19Q96LW7 228 aa12.28□□□□□ -0.44
CIRBP-217ENST00000588230 CHTF8P0CG12 524 aa12.27□□□□□ -0.45
CIRBP-217ENST00000588230 SYCNQ0VAF6 134 aa12.27□□□□□ -0.45
CIRBP-217ENST00000588230 C2orf88Q9BSF0 95 aa12.27□□□□□ -0.45
CIRBP-217ENST00000588230 VCX2Q9H322 139 aa12.27□□□□□ -0.45
CIRBP-217ENST00000588230 IGLV4-69A0A075B6H9 119 aa12.26□□□□□ -0.45
CIRBP-217ENST00000588230 IGHV3OR16-9A0A0B4J2B5 98 aa12.26□□□□□ -0.45
CIRBP-217ENST00000588230 IGIPA6NJ69 53 aa12.25□□□□□ -0.45
CIRBP-217ENST00000588230 NPSP0C0P6 89 aa12.25□□□□□ -0.45
CIRBP-217ENST00000588230 CIRBPQ14011 172 aaKnown RBP12.25□□□□□ -0.45
CIRBP-217ENST00000588230 PKIGQ9Y2B9 76 aa12.25□□□□□ -0.45
CIRBP-217ENST00000588230 TRAPPC1Q9Y5R8 145 aa12.25□□□□□ -0.45
CIRBP-217ENST00000588230 KRTAP10-4P60372 401 aaPredicted RBP12.24□□□□□ -0.45
CIRBP-217ENST00000588230 PAPPA-AS1Q5QFB9 102 aa12.24□□□□□ -0.45
CIRBP-217ENST00000588230 LINC00242Q5T6M2 205 aa12.24□□□□□ -0.45
CIRBP-217ENST00000588230 ZC2HC1BQ5TFG8 222 aa12.24□□□□□ -0.45
CIRBP-217ENST00000588230 TOMM6Q96B49 74 aa12.24□□□□□ -0.45
CIRBP-217ENST00000588230 CAMK2N2Q96S95 79 aa12.24□□□□□ -0.45
CIRBP-217ENST00000588230 IGKV2-24A0A0C4DH68 120 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 SPAG11BQ08648 103 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 FA2HQ7L5A8 372 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 OR10D4PQ8NGN7 298 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 SPACA4Q8TDM5 124 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 C2orf48Q96LS8 159 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 AMELXQ99217 191 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 SMCO4Q9NRQ5 59 aa12.23□□□□□ -0.45
CIRBP-217ENST00000588230 A0A087WYN8 130 aa12.22□□□□□ -0.45
CIRBP-217ENST00000588230 UBE2D1P51668 147 aa12.22□□□□□ -0.45
CIRBP-217ENST00000588230 TIMM17AQ99595 171 aa12.22□□□□□ -0.45
CIRBP-217ENST00000588230 MAJINQ3KP22 176 aa12.21□□□□□ -0.45
CIRBP-217ENST00000588230 Q6ZRU5 148 aa12.21□□□□□ -0.45
CIRBP-217ENST00000588230 LINC00173Q6ZV60 143 aa12.21□□□□□ -0.45
CIRBP-217ENST00000588230 SCGB3A1Q96QR1 104 aa12.21□□□□□ -0.45
CIRBP-217ENST00000588230 A0A087WZ39 114 aa12.2□□□□□ -0.46
CIRBP-217ENST00000588230 LINC01546A6NGU7 62 aa12.2□□□□□ -0.46
CIRBP-217ENST00000588230 LINC01549A6NIU2 74 aa12.2□□□□□ -0.46
CIRBP-217ENST00000588230 ERASQ7Z444 233 aa12.2□□□□□ -0.46
CIRBP-217ENST00000588230 A0A096LNI7 61 aa12.19□□□□□ -0.46
CIRBP-217ENST00000588230 LINC00474Q9P2X8 69 aa12.19□□□□□ -0.46
CIRBP-217ENST00000588230 SLC7A5P1Q8MH63 180 aa12.18□□□□□ -0.46
CIRBP-217ENST00000588230 LRP1Q07954 4544 aaKnown RBP12.18□□□□□ -0.46
CIRBP-217ENST00000588230 LOC107984640A0A0U1RRK4 108 aa12.17□□□□□ -0.46
CIRBP-217ENST00000588230 F8WDY8 70 aa12.17□□□□□ -0.46
CIRBP-217ENST00000588230 RPL37AP61513 92 aaKnown RBP12.17□□□□□ -0.46
CIRBP-217ENST00000588230 PLAC8Q9NZF1 115 aa12.17□□□□□ -0.46
CIRBP-217ENST00000588230 PKHD1L1Q86WI1 4243 aa12.17□□□□□ -0.46
CIRBP-217ENST00000588230 SEC11AP67812 179 aa12.16□□□□□ -0.46
CIRBP-217ENST00000588230 STPG4Q8N801 248 aa12.16□□□□□ -0.46
CIRBP-217ENST00000588230 C18orf32Q8TCD1 76 aa12.16□□□□□ -0.46
CIRBP-217ENST00000588230 NDUFA1O15239 70 aa12.15□□□□□ -0.46
CIRBP-217ENST00000588230 FAM19A3Q7Z5A8 133 aa12.15□□□□□ -0.46
CIRBP-217ENST00000588230 LINC01561Q8N1V8 128 aa12.15□□□□□ -0.46
CIRBP-217ENST00000588230 YPEL4Q96NS1 127 aa12.15□□□□□ -0.46
CIRBP-217ENST00000588230 GEMIN7Q9H840 131 aaKnown RBP12.15□□□□□ -0.46
CIRBP-217ENST00000588230 LINC00614P0C842 121 aa12.14□□□□□ -0.47
CIRBP-217ENST00000588230 HERVK_113P63121 156 aa12.14□□□□□ -0.47
CIRBP-217ENST00000588230 GAGE2BQ13066 116 aa12.14□□□□□ -0.47
CIRBP-217ENST00000588230 RNF151Q2KHN1 245 aa12.14□□□□□ -0.47
CIRBP-217ENST00000588230 MRPL35Q9NZE8 188 aaKnown RBP12.14□□□□□ -0.47
CIRBP-217ENST00000588230 A0A0J9YXV3 536 aa12.13□□□□□ -0.47
CIRBP-217ENST00000588230 PTTG1IPP53801 180 aa12.13□□□□□ -0.47
CIRBP-217ENST00000588230 CBLN2Q8IUK8 224 aa12.13□□□□□ -0.47
CIRBP-217ENST00000588230 FAT3Q8TDW7 4589 aa12.13□□□□□ -0.47
CIRBP-217ENST00000588230 RAB5BP61020 215 aa12.12□□□□□ -0.47
CIRBP-217ENST00000588230 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
CIRBP-217ENST00000588230 UNQ6190/PRO20217Q6UXQ8 127 aa12.12□□□□□ -0.47
CIRBP-217ENST00000588230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.11□□□□□ -0.47
CIRBP-217ENST00000588230 RPL18AQ02543 176 aaKnown RBP12.11□□□□□ -0.47
CIRBP-217ENST00000588230 C10orf25Q5T742 122 aa12.11□□□□□ -0.47
CIRBP-217ENST00000588230 C7orf33Q8WU49 177 aa12.11□□□□□ -0.47
CIRBP-217ENST00000588230 URB1-AS1Q96HZ7 61 aa12.11□□□□□ -0.47
CIRBP-217ENST00000588230 CST9LQ9H4G1 147 aa12.11□□□□□ -0.47
CIRBP-217ENST00000588230 PRSS2P07478 247 aa12.1□□□□□ -0.47
CIRBP-217ENST00000588230 PMVKQ15126 192 aa12.1□□□□□ -0.47
CIRBP-217ENST00000588230 PACRGQ96M98 296 aaPredicted RBP12.1□□□□□ -0.47
CIRBP-217ENST00000588230 CDKN2A-AS1Q9UH64 79 aa12.1□□□□□ -0.47
CIRBP-217ENST00000588230 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
CIRBP-217ENST00000588230 C6orf48Q9UBA6 75 aa12.09□□□□□ -0.47
CIRBP-217ENST00000588230 TINCRA0A1B0GVN0 87 aa12.08□□□□□ -0.48
CIRBP-217ENST00000588230 HBDP02042 147 aa12.08□□□□□ -0.48
CIRBP-217ENST00000588230 LINC00469Q8N7U9 141 aa12.08□□□□□ -0.48
CIRBP-217ENST00000588230 A0A096LNJ9 63 aa12.07□□□□□ -0.48
CIRBP-217ENST00000588230 KRTAP29-1A8MX34 341 aaPredicted RBP12.07□□□□□ -0.48
CIRBP-217ENST00000588230 PMCHL1Q16048 86 aa12.07□□□□□ -0.48
CIRBP-217ENST00000588230 C6orf226Q5I0X4 101 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms