RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 LINC00862A6NCI5 91 aa8.49□□□□□ -1.05
DNMT1-213ENST00000587604 TCAPO15273 167 aa8.49□□□□□ -1.05
DNMT1-213ENST00000587604 MRPL51Q4U2R6 128 aaKnown RBP8.49□□□□□ -1.05
DNMT1-213ENST00000587604 C10orf25Q5T742 122 aa8.49□□□□□ -1.05
DNMT1-213ENST00000587604 FAM104BQ5XKR9 115 aa8.49□□□□□ -1.05
DNMT1-213ENST00000587604 FAM104AQ969W3 186 aa8.49□□□□□ -1.05
DNMT1-213ENST00000587604 NAT8BQ9UHF3 227 aa8.49□□□□□ -1.05
DNMT1-213ENST00000587604 RPL39P62891 51 aaKnown RBP8.48□□□□□ -1.05
DNMT1-213ENST00000587604 RPL32P62910 135 aaKnown RBP8.48□□□□□ -1.05
DNMT1-213ENST00000587604 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
DNMT1-213ENST00000587604 MRPS36P82909 103 aaKnown RBP8.47□□□□□ -1.05
DNMT1-213ENST00000587604 SPANXA1Q9NS26 97 aa8.47□□□□□ -1.05
DNMT1-213ENST00000587604 C6orf48Q9UBA6 75 aa8.47□□□□□ -1.05
DNMT1-213ENST00000587604 MUC2Q02817 5179 aa8.46□□□□□ -1.06
DNMT1-213ENST00000587604 SRP19P09132 144 aaKnown RBP8.46□□□□□ -1.06
DNMT1-213ENST00000587604 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.06
DNMT1-213ENST00000587604 CKS2P33552 79 aa8.46□□□□□ -1.06
DNMT1-213ENST00000587604 GAGE2EQ4V326 116 aa8.46□□□□□ -1.06
DNMT1-213ENST00000587604 FAM19A5Q7Z5A7 132 aaPredicted RBP8.46□□□□□ -1.06
DNMT1-213ENST00000587604 SMDT1Q9H4I9 107 aa8.46□□□□□ -1.06
DNMT1-213ENST00000587604 GAGE2DQ9UEU5 116 aa8.46□□□□□ -1.06
DNMT1-213ENST00000587604 TNFRSF6BO95407 300 aa8.45□□□□□ -1.06
DNMT1-213ENST00000587604 HBBP68871 147 aa8.45□□□□□ -1.06
DNMT1-213ENST00000587604 FAM74A3Q4VXF1 159 aa8.45□□□□□ -1.06
DNMT1-213ENST00000587604 KRTAP7-1Q8IUC3 87 aa8.45□□□□□ -1.06
DNMT1-213ENST00000587604 A0A1B0GW15 77 aa8.44□□□□□ -1.06
DNMT1-213ENST00000587604 IFITM10A6NMD0 228 aa8.44□□□□□ -1.06
DNMT1-213ENST00000587604 KIAA0087Q14695 138 aa8.44□□□□□ -1.06
DNMT1-213ENST00000587604 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
DNMT1-213ENST00000587604 SMIM27A0A1W2PRY6 76 aa8.43□□□□□ -1.06
DNMT1-213ENST00000587604 M0QXV9 152 aa8.43□□□□□ -1.06
DNMT1-213ENST00000587604 RPL13AP40429 203 aaKnown RBP8.43□□□□□ -1.06
DNMT1-213ENST00000587604 UBE2D1P51668 147 aa8.43□□□□□ -1.06
DNMT1-213ENST00000587604 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
DNMT1-213ENST00000587604 UBE2BP63146 152 aa8.43□□□□□ -1.06
DNMT1-213ENST00000587604 TGIF2-C20orf24A0A0A6YYL0 155 aa8.42□□□□□ -1.06
DNMT1-213ENST00000587604 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
DNMT1-213ENST00000587604 PRR4Q16378 134 aa8.42□□□□□ -1.06
DNMT1-213ENST00000587604 D6R8Y8 96 aa8.41□□□□□ -1.06
DNMT1-213ENST00000587604 CARHSP1Q9Y2V2 147 aaKnown RBP8.41□□□□□ -1.06
DNMT1-213ENST00000587604 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.06
DNMT1-213ENST00000587604 F8W036 122 aa8.4□□□□□ -1.06
DNMT1-213ENST00000587604 ADIRFQ15847 76 aa8.4□□□□□ -1.06
DNMT1-213ENST00000587604 LINC00242Q5T6M2 205 aa8.4□□□□□ -1.06
DNMT1-213ENST00000587604 AKAP14Q86UN6 197 aa8.4□□□□□ -1.06
DNMT1-213ENST00000587604 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.06
DNMT1-213ENST00000587604 NPYP01303 97 aa8.39□□□□□ -1.07
DNMT1-213ENST00000587604 PPBPP02775 128 aa8.39□□□□□ -1.07
DNMT1-213ENST00000587604 S100A8P05109 93 aa8.39□□□□□ -1.07
DNMT1-213ENST00000587604 IFI27P40305 119 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-213ENST00000587604 C9orf129Q5T035 196 aaKnown RBP8.39□□□□□ -1.07
DNMT1-213ENST00000587604 C2orf82Q6UX34 121 aa8.39□□□□□ -1.07
DNMT1-213ENST00000587604 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
DNMT1-213ENST00000587604 NAT8Q9UHE5 227 aa8.39□□□□□ -1.07
DNMT1-213ENST00000587604 ZNF861PO60384 105 aa8.38□□□□□ -1.07
DNMT1-213ENST00000587604 RAB5AP20339 215 aa8.38□□□□□ -1.07
DNMT1-213ENST00000587604 IGLV4-3A0A075B6K6 122 aa8.37□□□□□ -1.07
DNMT1-213ENST00000587604 MRPL54Q6P161 138 aaKnown RBP8.37□□□□□ -1.07
DNMT1-213ENST00000587604 LINC01561Q8N1V8 128 aa8.37□□□□□ -1.07
DNMT1-213ENST00000587604 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
DNMT1-213ENST00000587604 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
DNMT1-213ENST00000587604 A0A1B0GXF2 115 aa8.36□□□□□ -1.07
DNMT1-213ENST00000587604 C9JQL5 133 aa8.36□□□□□ -1.07
DNMT1-213ENST00000587604 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
DNMT1-213ENST00000587604 ORMDL3Q8N138 153 aa8.35□□□□□ -1.07
DNMT1-213ENST00000587604 NUPR1O60356 82 aa8.34□□□□□ -1.07
DNMT1-213ENST00000587604 TEX43Q6ZNM6 134 aa8.34□□□□□ -1.07
DNMT1-213ENST00000587604 C22orf24Q9Y442 160 aa8.34□□□□□ -1.07
DNMT1-213ENST00000587604 PRSS47A8MTI9 375 aa8.33□□□□□ -1.08
DNMT1-213ENST00000587604 PRSS2P07478 247 aa8.33□□□□□ -1.08
DNMT1-213ENST00000587604 LBHQ53QV2 105 aaPredicted RBP8.33□□□□□ -1.08
DNMT1-213ENST00000587604 PRELID3AQ96N28 172 aa8.33□□□□□ -1.08
DNMT1-213ENST00000587604 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
DNMT1-213ENST00000587604 TSPAN13O95857 204 aa8.32□□□□□ -1.08
DNMT1-213ENST00000587604 CKS1BP61024 79 aa8.32□□□□□ -1.08
DNMT1-213ENST00000587604 PEA15Q15121 130 aa8.32□□□□□ -1.08
DNMT1-213ENST00000587604 Q6ZN92 141 aa8.32□□□□□ -1.08
DNMT1-213ENST00000587604 SRSF3P84103 164 aaKnown RBP8.31□□□□□ -1.08
DNMT1-213ENST00000587604 C6orf226Q5I0X4 101 aa8.31□□□□□ -1.08
DNMT1-213ENST00000587604 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
DNMT1-213ENST00000587604 LINC00469Q8N7U9 141 aa8.31□□□□□ -1.08
DNMT1-213ENST00000587604 AMELXQ99217 191 aa8.31□□□□□ -1.08
DNMT1-213ENST00000587604 CTDSP1Q9GZU7 261 aa8.31□□□□□ -1.08
DNMT1-213ENST00000587604 VCX2Q9H322 139 aa8.31□□□□□ -1.08
DNMT1-213ENST00000587604 TOMM7Q9P0U1 55 aa8.31□□□□□ -1.08
DNMT1-213ENST00000587604 hCG_2014768A0A024R1R8 64 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 LOC389332A0A1B0GUA5 103 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 ZC2HC1BQ5TFG8 222 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 Q8IZM0 81 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 XAGE1AQ9HD64 81 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 CYSLTR1Q9Y271 337 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 LAMTOR2Q9Y2Q5 125 aa8.3□□□□□ -1.08
DNMT1-213ENST00000587604 NPSP0C0P6 89 aa8.29□□□□□ -1.08
DNMT1-213ENST00000587604 RPL28P46779 137 aaKnown RBP8.29□□□□□ -1.08
DNMT1-213ENST00000587604 C2orf66Q6UXQ4 117 aa8.29□□□□□ -1.08
DNMT1-213ENST00000587604 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
DNMT1-213ENST00000587604 ALKBH7Q9BT30 221 aaPredicted RBP8.29□□□□□ -1.08
DNMT1-213ENST00000587604 KRTAP9-2Q9BYQ4 174 aa8.29□□□□□ -1.08
DNMT1-213ENST00000587604 MAP1LC3AQ9H492 121 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms